RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 NDFIP1Q9BT67 221 aa12.9□□□□□ -0.34
CCDC8-201ENST00000307522 IGSF10Q6WRI0 2623 aa12.89□□□□□ -0.35
CCDC8-201ENST00000307522 CCL3L1P16619 93 aa12.89□□□□□ -0.35
CCDC8-201ENST00000307522 LOXL3P58215 753 aa12.89□□□□□ -0.35
CCDC8-201ENST00000307522 CD69Q07108 199 aa12.89□□□□□ -0.35
CCDC8-201ENST00000307522 CUBNO60494 3623 aa12.89□□□□□ -0.35
CCDC8-201ENST00000307522 TGFAP01135 160 aa12.89□□□□□ -0.35
CCDC8-201ENST00000307522 MT-ATP8P03928 68 aa12.89□□□□□ -0.35
CCDC8-201ENST00000307522 FOXA2Q9Y261 457 aaPredicted RBP12.89□□□□□ -0.35
CCDC8-201ENST00000307522 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCDC8-201ENST00000307522 A0A1B0GWB2 263 aa12.88□□□□□ -0.35
CCDC8-201ENST00000307522 NPIPB6E9PJ23 425 aa12.88□□□□□ -0.35
CCDC8-201ENST00000307522 GLRXP35754 106 aa12.88□□□□□ -0.35
CCDC8-201ENST00000307522 SAA1P0DJI8 122 aaPredicted RBP12.88□□□□□ -0.35
CCDC8-201ENST00000307522 C1orf162Q8NEQ5 155 aaPredicted RBP12.88□□□□□ -0.35
CCDC8-201ENST00000307522 RNF183Q96D59 192 aa12.88□□□□□ -0.35
CCDC8-201ENST00000307522 K7ENP7 123 aa12.88□□□□□ -0.35
CCDC8-201ENST00000307522 FAM222BQ8WU58 562 aa12.88□□□□□ -0.35
CCDC8-201ENST00000307522 PTH2Q96A98 100 aa12.88□□□□□ -0.35
CCDC8-201ENST00000307522 ZNF48Q96MX3 618 aaPredicted RBP12.88□□□□□ -0.35
CCDC8-201ENST00000307522 CHAC1Q9BUX1 264 aa12.88□□□□□ -0.35
CCDC8-201ENST00000307522 LINC01548A6NM66 108 aa12.87□□□□□ -0.35
CCDC8-201ENST00000307522 SYT8Q8NBV8 401 aa12.87□□□□□ -0.35
CCDC8-201ENST00000307522 Q9H3A6 140 aa12.87□□□□□ -0.35
CCDC8-201ENST00000307522 A0A1B0GUT8 65 aa12.87□□□□□ -0.35
CCDC8-201ENST00000307522 GAS8-AS1O95177 125 aa12.87□□□□□ -0.35
CCDC8-201ENST00000307522 DDB2Q92466 427 aa12.87□□□□□ -0.35
CCDC8-201ENST00000307522 CALYQ9NYX4 217 aa12.87□□□□□ -0.35
CCDC8-201ENST00000307522 TCRBV4S1A1TA0A5B7 111 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 CCL21O00585 134 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 PRCDQ00LT1 54 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 ADIPOQQ15848 244 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 IGF2-ASQ6U949 168 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 LYPD2Q6UXB3 125 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 ZNF479Q96JC4 524 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 MLST8Q9BVC4 326 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 PRSS22Q9GZN4 317 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 DYNLRB1Q9NP97 96 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 SPINK8P0C7L1 97 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 ABCA12Q86UK0 2595 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 C19orf71A6NCJ1 209 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 SRRM5B3KS81 715 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 CT45A6P0DMU7 189 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 CT45A5P0DMU8 189 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 CT45A7P0DMV0 189 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 OR1L4Q8NGR5 311 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 C17orf77Q96MU5 243 aa12.86□□□□□ -0.35
CCDC8-201ENST00000307522 TCRAP04437 139 aa12.85□□□□□ -0.35
CCDC8-201ENST00000307522 IFI27L1Q96BM0 104 aa12.85□□□□□ -0.35
CCDC8-201ENST00000307522 OR4X2Q8NGF9 303 aa12.85□□□□□ -0.35
CCDC8-201ENST00000307522 PRNDQ9UKY0 176 aa12.85□□□□□ -0.35
CCDC8-201ENST00000307522 ZNF462Q96JM2 2506 aa12.85□□□□□ -0.35
CCDC8-201ENST00000307522 IGHV3-72A0A0B4J1Y9 119 aa12.84□□□□□ -0.35
CCDC8-201ENST00000307522 OR9G4Q8NGQ1 327 aa12.84□□□□□ -0.35
CCDC8-201ENST00000307522 WT1-ASQ06250 92 aa12.84□□□□□ -0.35
CCDC8-201ENST00000307522 MRAP2Q96G30 205 aa12.84□□□□□ -0.35
CCDC8-201ENST00000307522 MRPL32Q9BYC8 188 aaKnown RBP12.84□□□□□ -0.35
CCDC8-201ENST00000307522 J3QR89 54 aa12.84□□□□□ -0.35
CCDC8-201ENST00000307522 UPK2O00526 184 aa12.84□□□□□ -0.35
CCDC8-201ENST00000307522 PRSS1P07477 247 aa12.84□□□□□ -0.35
CCDC8-201ENST00000307522 EVI2AP22794 236 aa12.84□□□□□ -0.35
CCDC8-201ENST00000307522 DIAPH2-AS1Q14236 149 aa12.84□□□□□ -0.35
CCDC8-201ENST00000307522 PRR7Q8TB68 274 aa12.84□□□□□ -0.35
CCDC8-201ENST00000307522 ZNF418Q8TF45 676 aaPredicted RBP12.84□□□□□ -0.35
CCDC8-201ENST00000307522 PRELID3AQ96N28 172 aa12.84□□□□□ -0.35
CCDC8-201ENST00000307522 RNF7Q9UBF6 113 aa12.84□□□□□ -0.35
CCDC8-201ENST00000307522 IGKV1D-37A0A075B6S9 117 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 FHL3Q13643 280 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 RPUSD1Q9UJJ7 312 aaKnown RBP12.83□□□□□ -0.36
CCDC8-201ENST00000307522 OR5AN1Q8NGI8 311 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 JPT1Q9UK76 154 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 TLN2Q9Y4G6 2542 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 TRBV25-1A0A075B6N4 114 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 FAM90A9PA6NNJ1 464 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 IGLL5B9A064 214 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 DLL1O00548 723 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 APOMO95445 188 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 SCGB1A1P11684 91 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 TNFRSF1AP19438 455 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 GAGE13Q4V321 117 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 SHISA2Q6UWI4 295 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 OSR1Q8TAX0 266 aaPredicted RBP12.83□□□□□ -0.36
CCDC8-201ENST00000307522 HARBI1Q96MB7 349 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 TPSG1Q9NRR2 321 aa12.83□□□□□ -0.36
CCDC8-201ENST00000307522 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.82□□□□□ -0.36
CCDC8-201ENST00000307522 ZNF785A8K8V0 405 aa12.82□□□□□ -0.36
CCDC8-201ENST00000307522 NDUFS7O75251 213 aa12.82□□□□□ -0.36
CCDC8-201ENST00000307522 TMEM160Q9NX00 188 aa12.82□□□□□ -0.36
CCDC8-201ENST00000307522 B5MCH6 92 aa12.82□□□□□ -0.36
CCDC8-201ENST00000307522 Q86TA4 180 aa12.82□□□□□ -0.36
CCDC8-201ENST00000307522 SPATA25Q9BR10 227 aa12.82□□□□□ -0.36
CCDC8-201ENST00000307522 TMEM189A5PLL7 270 aa12.81□□□□□ -0.36
CCDC8-201ENST00000307522 M0R3E3 92 aa12.81□□□□□ -0.36
CCDC8-201ENST00000307522 NPYP01303 97 aa12.81□□□□□ -0.36
CCDC8-201ENST00000307522 MAPKAPK5-AS1Q8N8E1 139 aa12.81□□□□□ -0.36
CCDC8-201ENST00000307522 E7EQL1 145 aa12.81□□□□□ -0.36
CCDC8-201ENST00000307522 FSTL3O95633 263 aa12.81□□□□□ -0.36
CCDC8-201ENST00000307522 MYCNOSP40205 109 aa12.81□□□□□ -0.36
CCDC8-201ENST00000307522 LYZP61626 148 aa12.81□□□□□ -0.36
CCDC8-201ENST00000307522 PHLDA1Q8WV24 401 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms