RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PRELID1Q9Y255 219 aa18.05■□□□□ 0.48
HOXC9-201ENST00000303450 A0A0J9YX75 114 aa18.04■□□□□ 0.48
HOXC9-201ENST00000303450 APOC4P55056 127 aa18.04■□□□□ 0.48
HOXC9-201ENST00000303450 TRPT1Q86TN4 253 aaKnown RBP18.04■□□□□ 0.48
HOXC9-201ENST00000303450 LYPD1Q8N2G4 141 aa18.04■□□□□ 0.48
HOXC9-201ENST00000303450 ASCL2Q99929 193 aa18.04■□□□□ 0.48
HOXC9-201ENST00000303450 SULT1A2P50226 295 aa18.03■□□□□ 0.48
HOXC9-201ENST00000303450 HAGHQ16775 308 aa18.03■□□□□ 0.48
HOXC9-201ENST00000303450 SBSPONQ8IVN8 264 aa18.03■□□□□ 0.48
HOXC9-201ENST00000303450 SFT2D1Q8WV19 159 aa18.03■□□□□ 0.48
HOXC9-201ENST00000303450 Q9H3A6 140 aa18.03■□□□□ 0.48
HOXC9-201ENST00000303450 M0R3E3 92 aa18.03■□□□□ 0.48
HOXC9-201ENST00000303450 PRB4P10163 310 aaPredicted RBP18.03■□□□□ 0.48
HOXC9-201ENST00000303450 OR4B1Q8NGF8 309 aa18.03■□□□□ 0.48
HOXC9-201ENST00000303450 SUN5Q8TC36 379 aa18.03■□□□□ 0.48
HOXC9-201ENST00000303450 MRPL53Q96EL3 112 aaKnown RBP18.03■□□□□ 0.48
HOXC9-201ENST00000303450 KIR2DL5BA0A0G2JN68 375 aa18.02■□□□□ 0.47
HOXC9-201ENST00000303450 KIR2DL5BA0A0G2JPC4 375 aa18.02■□□□□ 0.47
HOXC9-201ENST00000303450 IGKV3-20P01619 116 aa18.02■□□□□ 0.47
HOXC9-201ENST00000303450 H2AFB1P0C5Y9 115 aa18.02■□□□□ 0.47
HOXC9-201ENST00000303450 KIR2DL5AQ8N109 375 aa18.02■□□□□ 0.47
HOXC9-201ENST00000303450 OR8A1Q8NGG7 326 aa18.02■□□□□ 0.47
HOXC9-201ENST00000303450 KIR2DL5BQ8NHK3 375 aa18.02■□□□□ 0.47
HOXC9-201ENST00000303450 MBD3L1Q8WWY6 194 aa18.02■□□□□ 0.47
HOXC9-201ENST00000303450 TMPRSS5Q9H3S3 457 aa18.02■□□□□ 0.47
HOXC9-201ENST00000303450 DUSP14O95147 198 aaKnown RBP18.01■□□□□ 0.47
HOXC9-201ENST00000303450 ZNF705DP0CH99 300 aaPredicted RBP18.01■□□□□ 0.47
HOXC9-201ENST00000303450 ZNF705BP0CI00 300 aaPredicted RBP18.01■□□□□ 0.47
HOXC9-201ENST00000303450 HIST1H1AQ02539 215 aaPredicted RBP18.01■□□□□ 0.47
HOXC9-201ENST00000303450 FAM74A1Q5RGS3 127 aa18.01■□□□□ 0.47
HOXC9-201ENST00000303450 ALKAL2Q6UX46 152 aa18.01■□□□□ 0.47
HOXC9-201ENST00000303450 CSTL1Q9H114 145 aa18.01■□□□□ 0.47
HOXC9-201ENST00000303450 PRAC2D3DTV9 90 aa18■□□□□ 0.47
HOXC9-201ENST00000303450 OTORQ9NRC9 128 aa18■□□□□ 0.47
HOXC9-201ENST00000303450 CSN1S1P47710 185 aa17.99■□□□□ 0.47
HOXC9-201ENST00000303450 CNN1P51911 297 aaKnown RBP17.99■□□□□ 0.47
HOXC9-201ENST00000303450 NUTF2P61970 127 aaKnown RBP17.99■□□□□ 0.47
HOXC9-201ENST00000303450 OR10J6PQ8NGY7 276 aa17.99■□□□□ 0.47
HOXC9-201ENST00000303450 A0A1B0GV50 99 aa17.98■□□□□ 0.47
HOXC9-201ENST00000303450 PGPA6NDG6 321 aa17.98■□□□□ 0.47
HOXC9-201ENST00000303450 MORN3Q6PF18 240 aaPredicted RBP17.98■□□□□ 0.47
HOXC9-201ENST00000303450 UBE2CO00762 179 aa17.98■□□□□ 0.47
HOXC9-201ENST00000303450 CMTM2Q8TAZ6 248 aa17.98■□□□□ 0.47
HOXC9-201ENST00000303450 CLUHP3Q96NS8 147 aa17.98■□□□□ 0.47
HOXC9-201ENST00000303450 CA1P00915 261 aaPredicted RBP17.97■□□□□ 0.47
HOXC9-201ENST00000303450 RXFP4Q8TDU9 374 aa17.97■□□□□ 0.47
HOXC9-201ENST00000303450 ZNF705EA8MWA4 302 aaPredicted RBP17.96■□□□□ 0.47
HOXC9-201ENST00000303450 UBE2G2P60604 165 aa17.96■□□□□ 0.47
HOXC9-201ENST00000303450 PPP1R14DQ9NXH3 145 aa17.96■□□□□ 0.47
HOXC9-201ENST00000303450 A0A1W2PRE2 83 aa17.95■□□□□ 0.46
HOXC9-201ENST00000303450 TEX46H3BTG2 121 aa17.95■□□□□ 0.46
HOXC9-201ENST00000303450 A8MTW9 85 aa17.94■□□□□ 0.46
HOXC9-201ENST00000303450 NHLRC4P0CG21 123 aaPredicted RBP17.94■□□□□ 0.46
HOXC9-201ENST00000303450 ZMAT4Q9H898 229 aa17.94■□□□□ 0.46
HOXC9-201ENST00000303450 TRAV1-1A0A0B4J248 108 aa17.93■□□□□ 0.46
HOXC9-201ENST00000303450 HBE1P02100 147 aa17.93■□□□□ 0.46
HOXC9-201ENST00000303450 SLC25A5P05141 298 aaKnown RBP17.93■□□□□ 0.46
HOXC9-201ENST00000303450 SUMO1P63165 101 aaKnown RBP17.93■□□□□ 0.46
HOXC9-201ENST00000303450 Q6ZWC4 215 aa17.93■□□□□ 0.46
HOXC9-201ENST00000303450 SPATA25Q9BR10 227 aa17.93■□□□□ 0.46
HOXC9-201ENST00000303450 TM2D3Q9BRN9 247 aa17.93■□□□□ 0.46
HOXC9-201ENST00000303450 RPH3ALQ9UNE2 315 aa17.93■□□□□ 0.46
HOXC9-201ENST00000303450 YTHDF2Q9Y5A9 579 aaKnown RBP17.93■□□□□ 0.46
HOXC9-201ENST00000303450 IGKV2-40A0A087WW87 121 aaPredicted RBP17.93■□□□□ 0.46
HOXC9-201ENST00000303450 IGKV2D-40P01614 121 aaPredicted RBP17.93■□□□□ 0.46
HOXC9-201ENST00000303450 FXYD7P58549 80 aa17.93■□□□□ 0.46
HOXC9-201ENST00000303450 DEFB135Q30KP9 77 aa17.93■□□□□ 0.46
HOXC9-201ENST00000303450 C1QTNF4Q9BXJ3 329 aa17.93■□□□□ 0.46
HOXC9-201ENST00000303450 SLC35B3Q9H1N7 401 aa17.93■□□□□ 0.46
HOXC9-201ENST00000303450 FAM74A7A6NL05 159 aa17.92■□□□□ 0.46
HOXC9-201ENST00000303450 GGTLC3B5MD39 225 aa17.92■□□□□ 0.46
HOXC9-201ENST00000303450 DIRC3C9JPN6 131 aa17.92■□□□□ 0.46
HOXC9-201ENST00000303450 NPIPB6E9PJ23 425 aa17.92■□□□□ 0.46
HOXC9-201ENST00000303450 GIG44P09565 113 aaPredicted RBP17.92■□□□□ 0.46
HOXC9-201ENST00000303450 AMTNQ6UX39 209 aa17.92■□□□□ 0.46
HOXC9-201ENST00000303450 C5orf17Q8NAS9 161 aa17.92■□□□□ 0.46
HOXC9-201ENST00000303450 NKX6-2Q9C056 277 aaPredicted RBP17.92■□□□□ 0.46
HOXC9-201ENST00000303450 XCL2Q9UBD3 114 aa17.92■□□□□ 0.46
HOXC9-201ENST00000303450 PPT1P50897 306 aa17.91■□□□□ 0.46
HOXC9-201ENST00000303450 ERCC8Q13216 396 aa17.91■□□□□ 0.46
HOXC9-201ENST00000303450 NBEAL2Q6ZNJ1 2754 aa17.91■□□□□ 0.46
HOXC9-201ENST00000303450 ARL6IP6Q8N6S5 226 aa17.91■□□□□ 0.46
HOXC9-201ENST00000303450 BLOC1S1P78537 153 aa17.9■□□□□ 0.46
HOXC9-201ENST00000303450 TEX261Q6UWH6 196 aa17.9■□□□□ 0.46
HOXC9-201ENST00000303450 LINC00477Q96M19 166 aa17.9■□□□□ 0.46
HOXC9-201ENST00000303450 RCHY1Q96PM5 261 aa17.9■□□□□ 0.46
HOXC9-201ENST00000303450 VGLL1Q99990 258 aa17.9■□□□□ 0.46
HOXC9-201ENST00000303450 RBAKDNA6NC62 111 aa17.89■□□□□ 0.45
HOXC9-201ENST00000303450 GNG5P63218 68 aa17.89■□□□□ 0.45
HOXC9-201ENST00000303450 TMEM78Q5T7P6 136 aa17.89■□□□□ 0.45
HOXC9-201ENST00000303450 CST9LP1Q5W188 147 aa17.89■□□□□ 0.45
HOXC9-201ENST00000303450 C9orf47Q6ZRZ4 202 aa17.89■□□□□ 0.45
HOXC9-201ENST00000303450 AGPAT4-IT1Q9H0P7 198 aa17.89■□□□□ 0.45
HOXC9-201ENST00000303450 RETNQ9HD89 108 aa17.89■□□□□ 0.45
HOXC9-201ENST00000303450 ARL2-SNX15V9GYD0 113 aa17.89■□□□□ 0.45
HOXC9-201ENST00000303450 PAGE4O60829 102 aa17.88■□□□□ 0.45
HOXC9-201ENST00000303450 IFNA7P01567 189 aa17.88■□□□□ 0.45
HOXC9-201ENST00000303450 CCL20P78556 96 aa17.88■□□□□ 0.45
HOXC9-201ENST00000303450 SPINK13Q1W4C9 94 aa17.88■□□□□ 0.45
HOXC9-201ENST00000303450 GOLT1AQ6ZVE7 132 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms