RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 PRAC2D3DTV9 90 aa19.62■□□□□ 0.73
SDCCAG3-201ENST00000298537 GATCO43716 136 aaKnown RBP19.62■□□□□ 0.73
SDCCAG3-201ENST00000298537 CBLN1P23435 193 aa19.62■□□□□ 0.73
SDCCAG3-201ENST00000298537 GFI1BQ5VTD9 330 aa19.62■□□□□ 0.73
SDCCAG3-201ENST00000298537 FAM231DQ6ZW35 169 aa19.62■□□□□ 0.73
SDCCAG3-201ENST00000298537 CHEK1O14757 476 aa19.62■□□□□ 0.73
SDCCAG3-201ENST00000298537 PSG9Q00887 426 aa19.62■□□□□ 0.73
SDCCAG3-201ENST00000298537 ACTL10Q5JWF8 245 aa19.62■□□□□ 0.73
SDCCAG3-201ENST00000298537 TMEM75Q8N9X5 138 aa19.62■□□□□ 0.73
SDCCAG3-201ENST00000298537 ZC2HC1AQ96GY0 325 aa19.62■□□□□ 0.73
SDCCAG3-201ENST00000298537 C8orf49Q96NF6 230 aa19.62■□□□□ 0.73
SDCCAG3-201ENST00000298537 A0A0G2JLM5 398 aa19.61■□□□□ 0.73
SDCCAG3-201ENST00000298537 NDUFA4O00483 81 aa19.61■□□□□ 0.73
SDCCAG3-201ENST00000298537 TMEM183AQ8IXX5 376 aa19.61■□□□□ 0.73
SDCCAG3-201ENST00000298537 ZNF580Q9UK33 172 aa19.61■□□□□ 0.73
SDCCAG3-201ENST00000298537 SMIM27A0A1W2PRY6 76 aa19.6■□□□□ 0.73
SDCCAG3-201ENST00000298537 S100A9P06702 114 aaKnown RBP19.6■□□□□ 0.73
SDCCAG3-201ENST00000298537 TM4SF20Q53R12 229 aa19.6■□□□□ 0.73
SDCCAG3-201ENST00000298537 VGLL1Q99990 258 aa19.6■□□□□ 0.73
SDCCAG3-201ENST00000298537 NPFFR1Q9GZQ6 430 aa19.6■□□□□ 0.73
SDCCAG3-201ENST00000298537 C19orf71A6NCJ1 209 aa19.6■□□□□ 0.73
SDCCAG3-201ENST00000298537 MEOX2P50222 304 aa19.6■□□□□ 0.73
SDCCAG3-201ENST00000298537 Q8TAT8 98 aa19.6■□□□□ 0.73
SDCCAG3-201ENST00000298537 TRAV8-2A0A0B4J237 113 aa19.59■□□□□ 0.73
SDCCAG3-201ENST00000298537 UBE2CO00762 179 aa19.59■□□□□ 0.73
SDCCAG3-201ENST00000298537 MRPL54Q6P161 138 aaKnown RBP19.59■□□□□ 0.73
SDCCAG3-201ENST00000298537 PEF1Q9UBV8 284 aaKnown RBP19.59■□□□□ 0.73
SDCCAG3-201ENST00000298537 A0A087X0K7 114 aa19.58■□□□□ 0.73
SDCCAG3-201ENST00000298537 FAM209BQ5JX69 171 aa19.58■□□□□ 0.73
SDCCAG3-201ENST00000298537 PRR31Q5SQ13 230 aa19.58■□□□□ 0.73
SDCCAG3-201ENST00000298537 C16orf54Q6UWD8 224 aa19.58■□□□□ 0.73
SDCCAG3-201ENST00000298537 GLMPQ8WWB7 406 aa19.58■□□□□ 0.73
SDCCAG3-201ENST00000298537 BTF3L4Q96K17 158 aa19.58■□□□□ 0.73
SDCCAG3-201ENST00000298537 TRAPPC1Q9Y5R8 145 aa19.58■□□□□ 0.73
SDCCAG3-201ENST00000298537 CRIP1P50238 77 aa19.58■□□□□ 0.72
SDCCAG3-201ENST00000298537 LCN12Q6JVE5 192 aa19.58■□□□□ 0.72
SDCCAG3-201ENST00000298537 SMR3AQ99954 134 aa19.58■□□□□ 0.72
SDCCAG3-201ENST00000298537 YAE1D1Q9NRH1 226 aa19.58■□□□□ 0.72
SDCCAG3-201ENST00000298537 CSN1S1P47710 185 aa19.57■□□□□ 0.72
SDCCAG3-201ENST00000298537 PDZD11Q5EBL8 140 aa19.57■□□□□ 0.72
SDCCAG3-201ENST00000298537 C1orf194Q5T5A4 169 aa19.57■□□□□ 0.72
SDCCAG3-201ENST00000298537 TMEM190Q8WZ59 177 aa19.57■□□□□ 0.72
SDCCAG3-201ENST00000298537 SMIM12Q96EX1 92 aa19.57■□□□□ 0.72
SDCCAG3-201ENST00000298537 LINC00587B1AMM8 73 aa19.57■□□□□ 0.72
SDCCAG3-201ENST00000298537 ERCC8Q13216 396 aa19.57■□□□□ 0.72
SDCCAG3-201ENST00000298537 C8orf86Q6ZUL3 223 aa19.57■□□□□ 0.72
SDCCAG3-201ENST00000298537 TCF24Q7RTU0 167 aa19.57■□□□□ 0.72
SDCCAG3-201ENST00000298537 GRAMD2BQ96HH9 432 aa19.57■□□□□ 0.72
SDCCAG3-201ENST00000298537 IFITM10A6NMD0 228 aa19.56■□□□□ 0.72
SDCCAG3-201ENST00000298537 GZMBP10144 247 aa19.56■□□□□ 0.72
SDCCAG3-201ENST00000298537 RPL19P84098 196 aaKnown RBP19.56■□□□□ 0.72
SDCCAG3-201ENST00000298537 NEU1Q99519 415 aa19.56■□□□□ 0.72
SDCCAG3-201ENST00000298537 ESM1Q9NQ30 184 aa19.56■□□□□ 0.72
SDCCAG3-201ENST00000298537 K7EQM0 130 aa19.56■□□□□ 0.72
SDCCAG3-201ENST00000298537 S100A7P31151 101 aa19.56■□□□□ 0.72
SDCCAG3-201ENST00000298537 GPHB5Q86YW7 130 aa19.56■□□□□ 0.72
SDCCAG3-201ENST00000298537 ZNF253O75346 499 aa19.55■□□□□ 0.72
SDCCAG3-201ENST00000298537 C18orf65Q6ZTR6 163 aa19.55■□□□□ 0.72
SDCCAG3-201ENST00000298537 NUP35Q8NFH5 326 aa19.55■□□□□ 0.72
SDCCAG3-201ENST00000298537 GPR61Q9BZJ8 451 aa19.55■□□□□ 0.72
SDCCAG3-201ENST00000298537 IGKV3-7A0A075B6H7 116 aa19.54■□□□□ 0.72
SDCCAG3-201ENST00000298537 TRBV6-1A0A0K0K1D8 114 aa19.54■□□□□ 0.72
SDCCAG3-201ENST00000298537 RPP21Q9H633 154 aaKnown RBP19.54■□□□□ 0.72
SDCCAG3-201ENST00000298537 P01737 135 aa19.54■□□□□ 0.72
SDCCAG3-201ENST00000298537 GBGT1Q8N5D6 347 aa19.54■□□□□ 0.72
SDCCAG3-201ENST00000298537 GTSF1Q8WW33 167 aa19.54■□□□□ 0.72
SDCCAG3-201ENST00000298537 ZNF492Q9P255 531 aa19.54■□□□□ 0.72
SDCCAG3-201ENST00000298537 A0A1B0GUS0 222 aa19.53■□□□□ 0.72
SDCCAG3-201ENST00000298537 FAM181BA6NEQ2 426 aa19.53■□□□□ 0.72
SDCCAG3-201ENST00000298537 OTOGQ6ZRI0 2925 aa19.53■□□□□ 0.72
SDCCAG3-201ENST00000298537 DNAJC9-AS1A6NH13 148 aa19.53■□□□□ 0.72
SDCCAG3-201ENST00000298537 HIGD1CA8MV81 97 aa19.53■□□□□ 0.72
SDCCAG3-201ENST00000298537 CD5LO43866 347 aa19.53■□□□□ 0.72
SDCCAG3-201ENST00000298537 TSKUQ8WUA8 353 aa19.53■□□□□ 0.72
SDCCAG3-201ENST00000298537 ZFP30Q9Y2G7 519 aa19.53■□□□□ 0.72
SDCCAG3-201ENST00000298537 SNURFLB1AK76 121 aa19.52■□□□□ 0.72
SDCCAG3-201ENST00000298537 HOXA5P20719 270 aa19.52■□□□□ 0.72
SDCCAG3-201ENST00000298537 TRAV9-1A0A075B6T8 112 aa19.52■□□□□ 0.71
SDCCAG3-201ENST00000298537 DEFB1P60022 68 aa19.52■□□□□ 0.71
SDCCAG3-201ENST00000298537 DAZAP1Q96EP5 407 aaKnown RBP19.52■□□□□ 0.71
SDCCAG3-201ENST00000298537 C20orf173Q96LM9 149 aa19.52■□□□□ 0.71
SDCCAG3-201ENST00000298537 IZUMO1RA6ND01 250 aa19.51■□□□□ 0.71
SDCCAG3-201ENST00000298537 SRD5A1P18405 259 aa19.51■□□□□ 0.71
SDCCAG3-201ENST00000298537 RHPN1-AS1Q9BWJ2 59 aa19.51■□□□□ 0.71
SDCCAG3-201ENST00000298537 MRPL18Q9H0U6 180 aaKnown RBP19.51■□□□□ 0.71
SDCCAG3-201ENST00000298537 ZNF705DP0CH99 300 aaPredicted RBP19.5■□□□□ 0.71
SDCCAG3-201ENST00000298537 ZNF705BP0CI00 300 aaPredicted RBP19.5■□□□□ 0.71
SDCCAG3-201ENST00000298537 FOXE3Q13461 319 aa19.5■□□□□ 0.71
SDCCAG3-201ENST00000298537 GDF5OSQ5U4N7 250 aa19.5■□□□□ 0.71
SDCCAG3-201ENST00000298537 Q8N2B8 174 aa19.5■□□□□ 0.71
SDCCAG3-201ENST00000298537 IGHV7-4-1A0A0J9YVY3 117 aa19.5■□□□□ 0.71
SDCCAG3-201ENST00000298537 NPIPB6E9PJ23 425 aa19.5■□□□□ 0.71
SDCCAG3-201ENST00000298537 ZNF80P51504 273 aaPredicted RBP19.5■□□□□ 0.71
SDCCAG3-201ENST00000298537 MYOZ3Q8TDC0 251 aa19.5■□□□□ 0.71
SDCCAG3-201ENST00000298537 PRR25Q96S07 402 aa19.5■□□□□ 0.71
SDCCAG3-201ENST00000298537 IGHV4OR15-8A0A075B7B6 117 aa19.49■□□□□ 0.71
SDCCAG3-201ENST00000298537 A0A087WW49 117 aa19.49■□□□□ 0.71
SDCCAG3-201ENST00000298537 DEFB136Q30KP8 78 aa19.49■□□□□ 0.71
SDCCAG3-201ENST00000298537 TMEM136Q6ZRR5 245 aa19.49■□□□□ 0.71
SDCCAG3-201ENST00000298537 OR2D3Q8NGH3 330 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms