RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 CHD6Q8TD26 2715 aa15.37■□□□□ 0.05
NFIL3-201ENST00000297689 RIGQ13278 110 aa15.37■□□□□ 0.05
NFIL3-201ENST00000297689 MAJINQ3KP22 176 aa15.37■□□□□ 0.05
NFIL3-201ENST00000297689 CLEC5AQ9NY25 188 aa15.37■□□□□ 0.05
NFIL3-201ENST00000297689 TRAV9-2A0A087WT02 112 aa15.36■□□□□ 0.05
NFIL3-201ENST00000297689 ZNF493Q6ZR52 646 aa15.36■□□□□ 0.05
NFIL3-201ENST00000297689 ZNF502Q8TBZ5 544 aa15.36■□□□□ 0.05
NFIL3-201ENST00000297689 TMEM70Q9BUB7 260 aa15.36■□□□□ 0.05
NFIL3-201ENST00000297689 ASH1LQ9NR48 2969 aaKnown RBP15.36■□□□□ 0.05
NFIL3-201ENST00000297689 ATOH7Q8N100 152 aa15.36■□□□□ 0.05
NFIL3-201ENST00000297689 KLHDC1Q8N7A1 406 aa15.36■□□□□ 0.05
NFIL3-201ENST00000297689 C20orf202A1L168 122 aa15.35■□□□□ 0.05
NFIL3-201ENST00000297689 RABAC1Q9UI14 185 aa15.35■□□□□ 0.05
NFIL3-201ENST00000297689 CSN1S1P47710 185 aa15.34■□□□□ 0.05
NFIL3-201ENST00000297689 LINC00173Q6ZV60 143 aa15.34■□□□□ 0.05
NFIL3-201ENST00000297689 PSMG3-AS1Q96PY0 264 aa15.34■□□□□ 0.05
NFIL3-201ENST00000297689 BPESC1Q9GZL8 116 aa15.34■□□□□ 0.05
NFIL3-201ENST00000297689 COL12A1Q99715 3063 aa15.34■□□□□ 0.05
NFIL3-201ENST00000297689 FBLL1A6NHQ2 334 aaKnown RBP15.34■□□□□ 0.05
NFIL3-201ENST00000297689 RPLP1P05386 114 aaKnown RBP15.34■□□□□ 0.05
NFIL3-201ENST00000297689 OR5AL1P0C617 328 aa15.34■□□□□ 0.05
NFIL3-201ENST00000297689 ZNF575Q86XF7 245 aa15.34■□□□□ 0.05
NFIL3-201ENST00000297689 PRR25Q96S07 402 aa15.34■□□□□ 0.05
NFIL3-201ENST00000297689 ZFAND3Q9H8U3 227 aa15.34■□□□□ 0.05
NFIL3-201ENST00000297689 UBR5O95071 2799 aaPredicted RBP15.33■□□□□ 0.05
NFIL3-201ENST00000297689 CT45A10P0DMU9 189 aa15.33■□□□□ 0.04
NFIL3-201ENST00000297689 SAA4P35542 130 aa15.33■□□□□ 0.04
NFIL3-201ENST00000297689 SAPCD1Q5SSQ6 148 aa15.33■□□□□ 0.04
NFIL3-201ENST00000297689 IGKV2-40A0A087WW87 121 aaPredicted RBP15.32■□□□□ 0.04
NFIL3-201ENST00000297689 SYS1-DBNDD2H3BUS1 97 aa15.32■□□□□ 0.04
NFIL3-201ENST00000297689 SH2D1AO60880 128 aa15.32■□□□□ 0.04
NFIL3-201ENST00000297689 SCGB2A1O75556 95 aa15.32■□□□□ 0.04
NFIL3-201ENST00000297689 IGKV2D-40P01614 121 aaPredicted RBP15.32■□□□□ 0.04
NFIL3-201ENST00000297689 IGHV4-39P01824 125 aa15.32■□□□□ 0.04
NFIL3-201ENST00000297689 IGLL1P15814 213 aa15.32■□□□□ 0.04
NFIL3-201ENST00000297689 LEPROTL1O95214 131 aa15.32■□□□□ 0.04
NFIL3-201ENST00000297689 C15orf32Q32M92 178 aa15.32■□□□□ 0.04
NFIL3-201ENST00000297689 CENPVL3A0A0U1RRI6 287 aa15.31■□□□□ 0.04
NFIL3-201ENST00000297689 ATP6V0E1O15342 81 aa15.31■□□□□ 0.04
NFIL3-201ENST00000297689 ZNF138P52744 262 aa15.31■□□□□ 0.04
NFIL3-201ENST00000297689 UNQ5815/PRO19632Q6UWF5 114 aa15.31■□□□□ 0.04
NFIL3-201ENST00000297689 PIP4P2Q8N4L2 257 aa15.31■□□□□ 0.04
NFIL3-201ENST00000297689 LPAR2Q9HBW0 351 aa15.31■□□□□ 0.04
NFIL3-201ENST00000297689 A0A087X0K7 114 aa15.31■□□□□ 0.04
NFIL3-201ENST00000297689 TMUB1Q9BVT8 246 aa15.31■□□□□ 0.04
NFIL3-201ENST00000297689 U3KQK5 164 aa15.31■□□□□ 0.04
NFIL3-201ENST00000297689 LYZL1Q6UWQ5 148 aa15.3■□□□□ 0.04
NFIL3-201ENST00000297689 Q6ZN92 141 aa15.3■□□□□ 0.04
NFIL3-201ENST00000297689 VGLL1Q99990 258 aa15.3■□□□□ 0.04
NFIL3-201ENST00000297689 MRPS16Q9Y3D3 137 aaKnown RBP15.3■□□□□ 0.04
NFIL3-201ENST00000297689 TMEM189A5PLL7 270 aa15.29■□□□□ 0.04
NFIL3-201ENST00000297689 BUB3O43684 328 aa15.29■□□□□ 0.04
NFIL3-201ENST00000297689 TSPOP30536 169 aa15.29■□□□□ 0.04
NFIL3-201ENST00000297689 RHOGP84095 191 aa15.29■□□□□ 0.04
NFIL3-201ENST00000297689 RELQ04864 619 aaPredicted RBP15.29■□□□□ 0.04
NFIL3-201ENST00000297689 CLPSL1A2RUU4 121 aa15.29■□□□□ 0.04
NFIL3-201ENST00000297689 LINC01548A6NM66 108 aa15.29■□□□□ 0.04
NFIL3-201ENST00000297689 HLA-DMBP28068 263 aa15.29■□□□□ 0.04
NFIL3-201ENST00000297689 GPR183P32249 361 aa15.29■□□□□ 0.04
NFIL3-201ENST00000297689 ZNF80P51504 273 aaPredicted RBP15.29■□□□□ 0.04
NFIL3-201ENST00000297689 CCDC140Q96MF4 163 aa15.29■□□□□ 0.04
NFIL3-201ENST00000297689 LAMTOR2Q9Y2Q5 125 aa15.29■□□□□ 0.04
NFIL3-201ENST00000297689 OR4C46A6NHA9 309 aa15.28■□□□□ 0.04
NFIL3-201ENST00000297689 CLEC3BP05452 202 aa15.28■□□□□ 0.04
NFIL3-201ENST00000297689 S100A7P31151 101 aa15.28■□□□□ 0.04
NFIL3-201ENST00000297689 SRSF2Q01130 221 aaKnown RBP15.28■□□□□ 0.04
NFIL3-201ENST00000297689 SVEP1Q4LDE5 3571 aa15.28■□□□□ 0.04
NFIL3-201ENST00000297689 NPFFO15130 113 aa15.28■□□□□ 0.04
NFIL3-201ENST00000297689 RAB9AP51151 201 aa15.28■□□□□ 0.04
NFIL3-201ENST00000297689 HNRNPA3P51991 378 aaKnown RBP15.28■□□□□ 0.04
NFIL3-201ENST00000297689 ECSCRQ19T08 205 aa15.28■□□□□ 0.04
NFIL3-201ENST00000297689 IGFL4Q6B9Z1 124 aa15.28■□□□□ 0.04
NFIL3-201ENST00000297689 FAM208BQ5VWN6 2430 aa15.27■□□□□ 0.04
NFIL3-201ENST00000297689 AKAP6Q13023 2319 aa15.27■□□□□ 0.04
NFIL3-201ENST00000297689 IGHV3-35A0A0C4DH35 117 aa15.27■□□□□ 0.03
NFIL3-201ENST00000297689 IGLC6P0CF74 106 aa15.27■□□□□ 0.03
NFIL3-201ENST00000297689 COL5A1-AS1Q5SY13 56 aa15.27■□□□□ 0.03
NFIL3-201ENST00000297689 FAM104BQ5XKR9 115 aa15.27■□□□□ 0.03
NFIL3-201ENST00000297689 LRRK2Q5S007 2527 aa15.27■□□□□ 0.03
NFIL3-201ENST00000297689 IGHV3OR16-8A0A075B7F1 116 aa15.26■□□□□ 0.03
NFIL3-201ENST00000297689 TMEM213A2RRL7 107 aa15.26■□□□□ 0.03
NFIL3-201ENST00000297689 G3V318 75 aa15.26■□□□□ 0.03
NFIL3-201ENST00000297689 ZNF25P17030 456 aaPredicted RBP15.26■□□□□ 0.03
NFIL3-201ENST00000297689 PET117Q6UWS5 81 aa15.26■□□□□ 0.03
NFIL3-201ENST00000297689 C5orf56Q8N8D9 126 aa15.26■□□□□ 0.03
NFIL3-201ENST00000297689 TMEM208Q9BTX3 173 aa15.26■□□□□ 0.03
NFIL3-201ENST00000297689 UTP20O75691 2785 aaKnown RBP15.26■□□□□ 0.03
NFIL3-201ENST00000297689 STPG4Q8N801 248 aa15.26■□□□□ 0.03
NFIL3-201ENST00000297689 Q8TAT8 98 aa15.26■□□□□ 0.03
NFIL3-201ENST00000297689 AP5S1Q9NUS5 200 aa15.26■□□□□ 0.03
NFIL3-201ENST00000297689 CSN3P07498 182 aa15.25■□□□□ 0.03
NFIL3-201ENST00000297689 BMI1P35226 326 aa15.25■□□□□ 0.03
NFIL3-201ENST00000297689 GAGE1Q13065 139 aa15.25■□□□□ 0.03
NFIL3-201ENST00000297689 C19orf54Q5BKX5 351 aa15.25■□□□□ 0.03
NFIL3-201ENST00000297689 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.25■□□□□ 0.03
NFIL3-201ENST00000297689 TPPP3Q9BW30 176 aa15.25■□□□□ 0.03
NFIL3-201ENST00000297689 TMSB15BA0A087X1C1 80 aa15.24■□□□□ 0.03
NFIL3-201ENST00000297689 RPS20P60866 119 aaKnown RBP15.24■□□□□ 0.03
NFIL3-201ENST00000297689 PAX8Q06710 450 aa15.24■□□□□ 0.03
NFIL3-201ENST00000297689 SRSF1Q07955 248 aaKnown RBP eCLIP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms