RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 IGKV2-40A0A087WW87 121 aaPredicted RBP13.4□□□□□ -0.26
SPG7-201ENST00000268704 MRPS12O15235 138 aaKnown RBP13.4□□□□□ -0.26
SPG7-201ENST00000268704 IGKV2D-40P01614 121 aaPredicted RBP13.4□□□□□ -0.26
SPG7-201ENST00000268704 PAX2Q02962 417 aa13.4□□□□□ -0.26
SPG7-201ENST00000268704 IGFL4Q6B9Z1 124 aa13.4□□□□□ -0.26
SPG7-201ENST00000268704 C7orf71A4D174 169 aa13.4□□□□□ -0.26
SPG7-201ENST00000268704 IGHV3-23P01764 117 aa13.4□□□□□ -0.26
SPG7-201ENST00000268704 PPIAL4CA0A0B4J2A2 164 aa13.39□□□□□ -0.27
SPG7-201ENST00000268704 K7EQM0 130 aa13.39□□□□□ -0.27
SPG7-201ENST00000268704 GNG7O60262 68 aa13.39□□□□□ -0.27
SPG7-201ENST00000268704 PPIAL4GP0DN37 164 aa13.39□□□□□ -0.27
SPG7-201ENST00000268704 PRR30Q53SZ7 412 aaPredicted RBP13.39□□□□□ -0.27
SPG7-201ENST00000268704 ONECUT1Q9UBC0 465 aa13.39□□□□□ -0.27
SPG7-201ENST00000268704 CD5LO43866 347 aa13.39□□□□□ -0.27
SPG7-201ENST00000268704 LY6HO94772 140 aa13.39□□□□□ -0.27
SPG7-201ENST00000268704 CACNG7P62955 275 aa13.39□□□□□ -0.27
SPG7-201ENST00000268704 Q8TAT8 98 aa13.39□□□□□ -0.27
SPG7-201ENST00000268704 IGHV3OR16-8A0A075B7F1 116 aa13.38□□□□□ -0.27
SPG7-201ENST00000268704 FBLL1A6NHQ2 334 aaKnown RBP13.38□□□□□ -0.27
SPG7-201ENST00000268704 K7ERU9 68 aa13.38□□□□□ -0.27
SPG7-201ENST00000268704 CT45A10P0DMU9 189 aa13.38□□□□□ -0.27
SPG7-201ENST00000268704 FGF6P10767 208 aa13.38□□□□□ -0.27
SPG7-201ENST00000268704 TNFRSF14Q92956 283 aa13.38□□□□□ -0.27
SPG7-201ENST00000268704 PRELID3AQ96N28 172 aa13.38□□□□□ -0.27
SPG7-201ENST00000268704 SPTBN1Q01082 2364 aaKnown RBP13.38□□□□□ -0.27
SPG7-201ENST00000268704 SH2D1AO60880 128 aa13.38□□□□□ -0.27
SPG7-201ENST00000268704 CLUHP3Q96NS8 147 aa13.38□□□□□ -0.27
SPG7-201ENST00000268704 TLN1Q9Y490 2541 aaKnown RBP13.38□□□□□ -0.27
SPG7-201ENST00000268704 TRBV6-1A0A0K0K1D8 114 aa13.38□□□□□ -0.27
SPG7-201ENST00000268704 GFRALQ6UXV0 394 aa13.38□□□□□ -0.27
SPG7-201ENST00000268704 RABAC1Q9UI14 185 aa13.38□□□□□ -0.27
SPG7-201ENST00000268704 OR1N2Q8NGR9 330 aa13.37□□□□□ -0.27
SPG7-201ENST00000268704 ABHD17AQ96GS6 310 aa13.37□□□□□ -0.27
SPG7-201ENST00000268704 TMEM97Q5BJF2 176 aa13.37□□□□□ -0.27
SPG7-201ENST00000268704 GATD1Q8NB37 220 aa13.37□□□□□ -0.27
SPG7-201ENST00000268704 TMEM189A5PLL7 270 aa13.36□□□□□ -0.27
SPG7-201ENST00000268704 KLRD1Q13241 179 aa13.36□□□□□ -0.27
SPG7-201ENST00000268704 MRPL51Q4U2R6 128 aaKnown RBP13.36□□□□□ -0.27
SPG7-201ENST00000268704 TM4SF20Q53R12 229 aa13.36□□□□□ -0.27
SPG7-201ENST00000268704 PRSS57Q6UWY2 283 aa13.36□□□□□ -0.27
SPG7-201ENST00000268704 GAGE10A6NGK3 116 aa13.36□□□□□ -0.27
SPG7-201ENST00000268704 VSTM5A8MXK1 200 aa13.36□□□□□ -0.27
SPG7-201ENST00000268704 FAM104BQ5XKR9 115 aa13.36□□□□□ -0.27
SPG7-201ENST00000268704 AKAP6Q13023 2319 aa13.36□□□□□ -0.27
SPG7-201ENST00000268704 ZFHX3Q15911 3703 aa13.36□□□□□ -0.27
SPG7-201ENST00000268704 HLA-DMBP28068 263 aa13.36□□□□□ -0.27
SPG7-201ENST00000268704 APOBEC3AP31941 199 aaPredicted RBP13.36□□□□□ -0.27
SPG7-201ENST00000268704 THYN1Q9P016 225 aa13.36□□□□□ -0.27
SPG7-201ENST00000268704 ANKHD1Q8IWZ3 2542 aaKnown RBP13.35□□□□□ -0.27
SPG7-201ENST00000268704 IGHV3-35A0A0C4DH35 117 aa13.35□□□□□ -0.27
SPG7-201ENST00000268704 ZNF493Q6ZR52 646 aa13.35□□□□□ -0.27
SPG7-201ENST00000268704 JMJD8Q96S16 334 aa13.35□□□□□ -0.27
SPG7-201ENST00000268704 JKAMPQ9P055 326 aa13.35□□□□□ -0.27
SPG7-201ENST00000268704 LY6LH3BQJ8 138 aa13.35□□□□□ -0.27
SPG7-201ENST00000268704 GAS8-AS1O95177 125 aa13.35□□□□□ -0.27
SPG7-201ENST00000268704 NPYP01303 97 aa13.35□□□□□ -0.27
SPG7-201ENST00000268704 ZNF80P51504 273 aaPredicted RBP13.35□□□□□ -0.27
SPG7-201ENST00000268704 ORMDL3Q8N138 153 aa13.35□□□□□ -0.27
SPG7-201ENST00000268704 AAMDCQ9H7C9 122 aa13.35□□□□□ -0.27
SPG7-201ENST00000268704 PEF1Q9UBV8 284 aaKnown RBP13.35□□□□□ -0.27
SPG7-201ENST00000268704 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.34□□□□□ -0.27
SPG7-201ENST00000268704 H3BUT2 72 aa13.34□□□□□ -0.27
SPG7-201ENST00000268704 EGR2P11161 476 aaPredicted RBP13.34□□□□□ -0.27
SPG7-201ENST00000268704 HES1Q14469 280 aa13.34□□□□□ -0.27
SPG7-201ENST00000268704 IGF2-ASQ6U949 168 aa13.34□□□□□ -0.27
SPG7-201ENST00000268704 Q8NA96 180 aa13.34□□□□□ -0.27
SPG7-201ENST00000268704 CEP295Q9C0D2 2601 aa13.34□□□□□ -0.27
SPG7-201ENST00000268704 WI2-2373I1.2A0A1W2PRP0 233 aa13.34□□□□□ -0.27
SPG7-201ENST00000268704 NPIPB5A8MRT5 1133 aa13.34□□□□□ -0.27
SPG7-201ENST00000268704 C18orf15Q96N68 181 aa13.34□□□□□ -0.27
SPG7-201ENST00000268704 MSRB1Q9NZV6 116 aa13.34□□□□□ -0.27
SPG7-201ENST00000268704 NBR2O15453 112 aa13.33□□□□□ -0.27
SPG7-201ENST00000268704 Q6AWC8 147 aa13.33□□□□□ -0.27
SPG7-201ENST00000268704 PCP2Q8IVA1 136 aa13.33□□□□□ -0.27
SPG7-201ENST00000268704 LYPD1Q8N2G4 141 aa13.33□□□□□ -0.27
SPG7-201ENST00000268704 FER1L6-AS1Q8NA97 138 aa13.33□□□□□ -0.27
SPG7-201ENST00000268704 HRNRQ86YZ3 2850 aaPredicted RBP13.33□□□□□ -0.28
SPG7-201ENST00000268704 SPTBN4Q9H254 2564 aa13.33□□□□□ -0.28
SPG7-201ENST00000268704 A0A1B0GW15 77 aa13.33□□□□□ -0.28
SPG7-201ENST00000268704 TWIST1Q15672 202 aa13.33□□□□□ -0.28
SPG7-201ENST00000268704 LINC01560Q8TB33 94 aa13.33□□□□□ -0.28
SPG7-201ENST00000268704 VGLL1Q99990 258 aa13.33□□□□□ -0.28
SPG7-201ENST00000268704 PRSS47A8MTI9 375 aa13.33□□□□□ -0.28
SPG7-201ENST00000268704 F8W735 103 aaPredicted RBP13.33□□□□□ -0.28
SPG7-201ENST00000268704 NMUP48645 174 aa13.33□□□□□ -0.28
SPG7-201ENST00000268704 FANCD2OSQ96PS1 177 aa13.33□□□□□ -0.28
SPG7-201ENST00000268704 NDPQ00604 133 aa13.32□□□□□ -0.28
SPG7-201ENST00000268704 DKK2Q9UBU2 259 aa13.32□□□□□ -0.28
SPG7-201ENST00000268704 CKS2P33552 79 aa13.32□□□□□ -0.28
SPG7-201ENST00000268704 U3KQK5 164 aa13.32□□□□□ -0.28
SPG7-201ENST00000268704 HBDP02042 147 aa13.31□□□□□ -0.28
SPG7-201ENST00000268704 GTSF1LQ9H1H1 148 aa13.31□□□□□ -0.28
SPG7-201ENST00000268704 GRNP28799 593 aaKnown RBP13.31□□□□□ -0.28
SPG7-201ENST00000268704 RPL24P83731 157 aaKnown RBP13.31□□□□□ -0.28
SPG7-201ENST00000268704 PAX8Q06710 450 aa13.31□□□□□ -0.28
SPG7-201ENST00000268704 CFHR4Q92496 578 aa13.31□□□□□ -0.28
SPG7-201ENST00000268704 PRR25Q96S07 402 aa13.31□□□□□ -0.28
SPG7-201ENST00000268704 K7EMI3 77 aa13.3□□□□□ -0.28
SPG7-201ENST00000268704 LGALS9BQ3B8N2 356 aa13.3□□□□□ -0.28
SPG7-201ENST00000268704 LGALS9CQ6DKI2 356 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms