RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 LEPROTL1O95214 131 aa11.44□□□□□ -0.58
FOXF1-201ENST00000262426 OR10AG1Q8NH19 301 aa11.44□□□□□ -0.58
FOXF1-201ENST00000262426 MRPL27Q9P0M9 148 aaKnown RBP11.44□□□□□ -0.58
FOXF1-201ENST00000262426 BPIFA4PQ86YQ2 179 aa11.44□□□□□ -0.58
FOXF1-201ENST00000262426 MXRA5Q9NR99 2828 aa11.44□□□□□ -0.58
FOXF1-201ENST00000262426 A0A1B0GV72 72 aa11.43□□□□□ -0.58
FOXF1-201ENST00000262426 OR2K2Q8NGT1 345 aa11.43□□□□□ -0.58
FOXF1-201ENST00000262426 TEX22C9J3V5 150 aa11.43□□□□□ -0.58
FOXF1-201ENST00000262426 CXorf1O96002 111 aa11.43□□□□□ -0.58
FOXF1-201ENST00000262426 RAB31Q13636 194 aa11.43□□□□□ -0.58
FOXF1-201ENST00000262426 TCF24Q7RTU0 167 aa11.43□□□□□ -0.58
FOXF1-201ENST00000262426 NBR2O15453 112 aa11.43□□□□□ -0.58
FOXF1-201ENST00000262426 IGHV3-23P01764 117 aa11.43□□□□□ -0.58
FOXF1-201ENST00000262426 HLA-DQA1P01909 254 aa11.43□□□□□ -0.58
FOXF1-201ENST00000262426 TMEM219Q86XT9 240 aa11.43□□□□□ -0.58
FOXF1-201ENST00000262426 WFDC3Q8IUB2 231 aa11.43□□□□□ -0.58
FOXF1-201ENST00000262426 CREBBPQ92793 2442 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 A0A0G2JLM5 398 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 CD5LO43866 347 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 MPDU1O75352 247 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 NDPQ00604 133 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 ATP5G2Q06055 141 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 PRRC2AP48634 2157 aaKnown RBP11.42□□□□□ -0.58
FOXF1-201ENST00000262426 SYS1-DBNDD2H3BUS1 97 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 ORM2P19652 201 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 PRR20EP86478 221 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 PRR20CP86479 221 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 PRR20DP86480 221 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 PRR20BP86481 221 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 PRR20AP86496 221 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 CUBNO60494 3623 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 RHOBP62745 196 aa11.42□□□□□ -0.58
FOXF1-201ENST00000262426 TRAV40A0A0B4J280 105 aa11.41□□□□□ -0.58
FOXF1-201ENST00000262426 K7ERJ3 54 aa11.41□□□□□ -0.58
FOXF1-201ENST00000262426 KIR3DS1Q14943 382 aa11.41□□□□□ -0.58
FOXF1-201ENST00000262426 ATP6V0BQ99437 205 aa11.41□□□□□ -0.58
FOXF1-201ENST00000262426 SIGMAR1Q99720 223 aa11.41□□□□□ -0.58
FOXF1-201ENST00000262426 H3BTX0 84 aa11.41□□□□□ -0.58
FOXF1-201ENST00000262426 MT-ND6P03923 174 aa11.41□□□□□ -0.58
FOXF1-201ENST00000262426 OR8A1Q8NGG7 326 aa11.41□□□□□ -0.58
FOXF1-201ENST00000262426 BLNKQ8WV28 456 aa11.41□□□□□ -0.58
FOXF1-201ENST00000262426 PIMREGQ9BSJ6 248 aa11.41□□□□□ -0.58
FOXF1-201ENST00000262426 LINC00527Q9UJ94 153 aa11.41□□□□□ -0.58
FOXF1-201ENST00000262426 ITPR2Q14571 2701 aa11.41□□□□□ -0.58
FOXF1-201ENST00000262426 CENPVL3A0A0U1RRI6 287 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 K7EQM0 130 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 STAG3L2P0CL84 134 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 STAG3L3P0CL85 134 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 SUB1P53999 127 aaKnown RBP eCLIP11.4□□□□□ -0.58
FOXF1-201ENST00000262426 TMEM97Q5BJF2 176 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 C10orf105Q8TEF2 133 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 ASCL2Q99929 193 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 SS18L2Q9UHA2 77 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 IGKV1D-37A0A075B6S9 117 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 IGHV1-24A0A0C4DH33 117 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 A0A1W2PRE2 83 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 LINC01548A6NM66 108 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 SH2D6Q7Z4S9 175 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 LCNL1Q6ZST4 164 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 AJUBAQ96IF1 538 aa11.4□□□□□ -0.58
FOXF1-201ENST00000262426 IGHV3-35A0A0C4DH35 117 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 HLA-DRB1P01911 266 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 IGHV4-38-2P0DP08 117 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 COX6B1P14854 86 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 TMEM191AQ9H0A3 160 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 ST20Q9HBF5 79 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 NOTCH3Q9UM47 2321 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 ACANP16112 2415 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 HIGD1CA8MV81 97 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 PYYP10082 97 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 NMUP48645 174 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 C5orf64Q2M2E5 130 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 TPPP3Q9BW30 176 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 IGHV3OR16-8A0A075B7F1 116 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 NUP35Q8NFH5 326 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 TTTY13Q9BZ97 58 aa11.39□□□□□ -0.59
FOXF1-201ENST00000262426 NCR2O95944 276 aa11.38□□□□□ -0.59
FOXF1-201ENST00000262426 GATA3P23771 443 aa11.38□□□□□ -0.59
FOXF1-201ENST00000262426 PPIFP30405 207 aaKnown RBP11.38□□□□□ -0.59
FOXF1-201ENST00000262426 URB1-AS1Q96HZ7 61 aa11.38□□□□□ -0.59
FOXF1-201ENST00000262426 NPFFR1Q9GZQ6 430 aa11.38□□□□□ -0.59
FOXF1-201ENST00000262426 RABAC1Q9UI14 185 aa11.38□□□□□ -0.59
FOXF1-201ENST00000262426 PATE2Q6UY27 113 aa11.38□□□□□ -0.59
FOXF1-201ENST00000262426 ZNF503Q96F45 646 aa11.38□□□□□ -0.59
FOXF1-201ENST00000262426 PGLYRP4Q96LB8 373 aa11.38□□□□□ -0.59
FOXF1-201ENST00000262426 TRBV9A0A0B4J1U6 114 aa11.38□□□□□ -0.59
FOXF1-201ENST00000262426 UBE2E1P51965 193 aa11.38□□□□□ -0.59
FOXF1-201ENST00000262426 HIST1H1AQ02539 215 aaPredicted RBP11.38□□□□□ -0.59
FOXF1-201ENST00000262426 HSD52Q0P140 79 aa11.38□□□□□ -0.59
FOXF1-201ENST00000262426 AVPP01185 164 aa11.37□□□□□ -0.59
FOXF1-201ENST00000262426 GNG5P63218 68 aa11.37□□□□□ -0.59
FOXF1-201ENST00000262426 LY6EQ16553 131 aa11.37□□□□□ -0.59
FOXF1-201ENST00000262426 SCRT2Q9NQ03 307 aa11.37□□□□□ -0.59
FOXF1-201ENST00000262426 NPFFO15130 113 aa11.37□□□□□ -0.59
FOXF1-201ENST00000262426 ANXA2RQ3ZCQ2 193 aa11.37□□□□□ -0.59
FOXF1-201ENST00000262426 C1orf122Q6ZSJ8 110 aa11.37□□□□□ -0.59
FOXF1-201ENST00000262426 C7orf69Q9H7B7 122 aa11.37□□□□□ -0.59
FOXF1-201ENST00000262426 LOC389332A0A1B0GUA5 103 aa11.36□□□□□ -0.59
FOXF1-201ENST00000262426 K7EP34 96 aa11.36□□□□□ -0.59
FOXF1-201ENST00000262426 GCSHP23434 173 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 201.7 ms