RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 ZFHX2Q9C0A1 2572 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-201ENST00000262395 Q8TAT8 98 aa14.14□□□□□ -0.15
TRAF4-201ENST00000262395 ZNF414Q96IQ9 312 aa14.14□□□□□ -0.15
TRAF4-201ENST00000262395 H3BRN7 92 aa14.13□□□□□ -0.15
TRAF4-201ENST00000262395 C18orf15Q96N68 181 aa14.13□□□□□ -0.15
TRAF4-201ENST00000262395 IGHV3-35A0A0C4DH35 117 aa14.13□□□□□ -0.15
TRAF4-201ENST00000262395 TIMM23O14925 209 aa14.13□□□□□ -0.15
TRAF4-201ENST00000262395 FER1L6-AS1Q8NA97 138 aa14.13□□□□□ -0.15
TRAF4-201ENST00000262395 RALYQ9UKM9 306 aaKnown RBP14.13□□□□□ -0.15
TRAF4-201ENST00000262395 TMEM189A5PLL7 270 aa14.12□□□□□ -0.15
TRAF4-201ENST00000262395 H3BUT2 72 aa14.12□□□□□ -0.15
TRAF4-201ENST00000262395 NMUP48645 174 aa14.12□□□□□ -0.15
TRAF4-201ENST00000262395 ONECUT1Q9UBC0 465 aa14.12□□□□□ -0.15
TRAF4-201ENST00000262395 SH2D1AO60880 128 aa14.12□□□□□ -0.15
TRAF4-201ENST00000262395 FGF6P10767 208 aa14.12□□□□□ -0.15
TRAF4-201ENST00000262395 IGFL3Q6UXB1 125 aa14.12□□□□□ -0.15
TRAF4-201ENST00000262395 JMJD8Q96S16 334 aa14.12□□□□□ -0.15
TRAF4-201ENST00000262395 CHTOPQ9Y3Y2 248 aaKnown RBP14.12□□□□□ -0.15
TRAF4-201ENST00000262395 NBASA2RRP1 2371 aa14.12□□□□□ -0.15
TRAF4-201ENST00000262395 PCP2Q8IVA1 136 aa14.11□□□□□ -0.15
TRAF4-201ENST00000262395 AP1S3Q96PC3 154 aa14.11□□□□□ -0.15
TRAF4-201ENST00000262395 PRRG2O14669 202 aa14.11□□□□□ -0.15
TRAF4-201ENST00000262395 LY6HO94772 140 aa14.11□□□□□ -0.15
TRAF4-201ENST00000262395 MRPL51Q4U2R6 128 aaKnown RBP14.11□□□□□ -0.15
TRAF4-201ENST00000262395 PPIAL4CA0A0B4J2A2 164 aa14.11□□□□□ -0.15
TRAF4-201ENST00000262395 PPIAL4GP0DN37 164 aa14.11□□□□□ -0.15
TRAF4-201ENST00000262395 HLA-DMBP28068 263 aa14.11□□□□□ -0.15
TRAF4-201ENST00000262395 KAAG1Q9UBP8 84 aa14.11□□□□□ -0.15
TRAF4-201ENST00000262395 NPIPB5A8MRT5 1133 aa14.1□□□□□ -0.15
TRAF4-201ENST00000262395 GAS8-AS1O95177 125 aa14.1□□□□□ -0.15
TRAF4-201ENST00000262395 FAM104BQ5XKR9 115 aa14.1□□□□□ -0.15
TRAF4-201ENST00000262395 MSRB1Q9NZV6 116 aa14.1□□□□□ -0.15
TRAF4-201ENST00000262395 SHISA9B4DS77 424 aa14.1□□□□□ -0.15
TRAF4-201ENST00000262395 GNG7O60262 68 aa14.1□□□□□ -0.15
TRAF4-201ENST00000262395 NPYP01303 97 aa14.1□□□□□ -0.15
TRAF4-201ENST00000262395 TWIST1Q15672 202 aa14.1□□□□□ -0.15
TRAF4-201ENST00000262395 S100A7AQ86SG5 101 aa14.1□□□□□ -0.15
TRAF4-201ENST00000262395 DKK2Q9UBU2 259 aa14.1□□□□□ -0.15
TRAF4-201ENST00000262395 HES1Q14469 280 aa14.09□□□□□ -0.15
TRAF4-201ENST00000262395 ORMDL3Q8N138 153 aa14.09□□□□□ -0.15
TRAF4-201ENST00000262395 TTTY13Q9BZ97 58 aa14.09□□□□□ -0.15
TRAF4-201ENST00000262395 APOBEC3AP31941 199 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-201ENST00000262395 CKS2P33552 79 aa14.09□□□□□ -0.15
TRAF4-201ENST00000262395 AAMDCQ9H7C9 122 aa14.09□□□□□ -0.15
TRAF4-201ENST00000262395 MRPS12O15235 138 aaKnown RBP14.08□□□□□ -0.15
TRAF4-201ENST00000262395 EGR2P11161 476 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-201ENST00000262395 ZNF80P51504 273 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-201ENST00000262395 PAX2Q02962 417 aa14.08□□□□□ -0.16
TRAF4-201ENST00000262395 KLRD1Q13241 179 aa14.08□□□□□ -0.16
TRAF4-201ENST00000262395 GFRALQ6UXV0 394 aa14.08□□□□□ -0.16
TRAF4-201ENST00000262395 OR1N2Q8NGR9 330 aa14.08□□□□□ -0.16
TRAF4-201ENST00000262395 VSTM5A8MXK1 200 aa14.08□□□□□ -0.16
TRAF4-201ENST00000262395 PPIFP30405 207 aaKnown RBP14.08□□□□□ -0.16
TRAF4-201ENST00000262395 KIR3DS1Q14943 382 aa14.08□□□□□ -0.16
TRAF4-201ENST00000262395 ZNF292O60281 2723 aa14.07□□□□□ -0.16
TRAF4-201ENST00000262395 PRR30Q53SZ7 412 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-201ENST00000262395 VGLL1Q99990 258 aa14.07□□□□□ -0.16
TRAF4-201ENST00000262395 A1L4Q6 167 aa14.06□□□□□ -0.16
TRAF4-201ENST00000262395 IFI27L1Q96BM0 104 aa14.06□□□□□ -0.16
TRAF4-201ENST00000262395 TRBV6-1A0A0K0K1D8 114 aa14.06□□□□□ -0.16
TRAF4-201ENST00000262395 EVI2AP22794 236 aa14.06□□□□□ -0.16
TRAF4-201ENST00000262395 SEC11AP67812 179 aa14.06□□□□□ -0.16
TRAF4-201ENST00000262395 ZNF493Q6ZR52 646 aa14.06□□□□□ -0.16
TRAF4-201ENST00000262395 GTF2H5Q6ZYL4 71 aa14.06□□□□□ -0.16
TRAF4-201ENST00000262395 G3V4G9 280 aa14.05□□□□□ -0.16
TRAF4-201ENST00000262395 SMAD7O15105 426 aaKnown RBP14.05□□□□□ -0.16
TRAF4-201ENST00000262395 HBDP02042 147 aa14.05□□□□□ -0.16
TRAF4-201ENST00000262395 A0A1B0GW15 77 aa14.05□□□□□ -0.16
TRAF4-201ENST00000262395 K7EMI3 77 aa14.05□□□□□ -0.16
TRAF4-201ENST00000262395 BOD1L2Q8IYS8 172 aa14.05□□□□□ -0.16
TRAF4-201ENST00000262395 TNFRSF14Q92956 283 aa14.05□□□□□ -0.16
TRAF4-201ENST00000262395 SPTA1P02549 2419 aa14.05□□□□□ -0.16
TRAF4-201ENST00000262395 Q6AWC8 147 aa14.04□□□□□ -0.16
TRAF4-201ENST00000262395 GATD1Q8NB37 220 aa14.04□□□□□ -0.16
TRAF4-201ENST00000262395 ABHD17AQ96GS6 310 aa14.04□□□□□ -0.16
TRAF4-201ENST00000262395 TLN1Q9Y490 2541 aaKnown RBP14.04□□□□□ -0.16
TRAF4-201ENST00000262395 A0A0G2JLM5 398 aa14.04□□□□□ -0.16
TRAF4-201ENST00000262395 C9orf118A6NHY6 69 aa14.04□□□□□ -0.16
TRAF4-201ENST00000262395 NDUFS7O75251 213 aa14.04□□□□□ -0.16
TRAF4-201ENST00000262395 ORM1P02763 201 aa14.04□□□□□ -0.16
TRAF4-201ENST00000262395 LGALS9BQ3B8N2 356 aa14.04□□□□□ -0.16
TRAF4-201ENST00000262395 LGALS9CQ6DKI2 356 aa14.04□□□□□ -0.16
TRAF4-201ENST00000262395 WI2-2373I1.2A0A1W2PRP0 233 aa14.04□□□□□ -0.16
TRAF4-201ENST00000262395 GATA1P15976 413 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-201ENST00000262395 LYPD1Q8N2G4 141 aa14.04□□□□□ -0.16
TRAF4-201ENST00000262395 LINC01560Q8TB33 94 aa14.04□□□□□ -0.16
TRAF4-201ENST00000262395 A6NDN8 102 aa14.03□□□□□ -0.16
TRAF4-201ENST00000262395 NBR2O15453 112 aa14.03□□□□□ -0.16
TRAF4-201ENST00000262395 Q5PR19 223 aa14.03□□□□□ -0.16
TRAF4-201ENST00000262395 PRR25Q96S07 402 aa14.03□□□□□ -0.16
TRAF4-201ENST00000262395 NCBP2LA6PVI3 153 aaKnown RBP14.03□□□□□ -0.16
TRAF4-201ENST00000262395 ERCC8Q13216 396 aa14.03□□□□□ -0.16
TRAF4-201ENST00000262395 U3KQK5 164 aa14.03□□□□□ -0.16
TRAF4-201ENST00000262395 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.02□□□□□ -0.16
TRAF4-201ENST00000262395 FANCD2OSQ96PS1 177 aa14.02□□□□□ -0.16
TRAF4-201ENST00000262395 PTPRZ1P23471 2315 aaPredicted RBP14.02□□□□□ -0.16
TRAF4-201ENST00000262395 IGKV2D-26A0A0A0MRZ7 120 aa14.01□□□□□ -0.17
TRAF4-201ENST00000262395 LY6LH3BQJ8 138 aa14.01□□□□□ -0.17
TRAF4-201ENST00000262395 H3BRM9 83 aa14.01□□□□□ -0.17
TRAF4-201ENST00000262395 UFSP1Q6NVU6 142 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms