RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 CRIPAKQ8N1N5 446 aa10.66□□□□□ -0.7
COL1A1-201ENST00000225964 TMEM243Q9BU79 118 aa10.66□□□□□ -0.7
COL1A1-201ENST00000225964 LHFPL1Q86WI0 220 aa10.66□□□□□ -0.7
COL1A1-201ENST00000225964 TRBV6-6A0A0A6YYG2 114 aa10.66□□□□□ -0.7
COL1A1-201ENST00000225964 RPP25LQ8N5L8 163 aaKnown RBP10.65□□□□□ -0.7
COL1A1-201ENST00000225964 RHODO00212 210 aa10.65□□□□□ -0.7
COL1A1-201ENST00000225964 FGF16O43320 207 aa10.65□□□□□ -0.7
COL1A1-201ENST00000225964 TRIOBPQ9H2D6 2365 aa10.65□□□□□ -0.7
COL1A1-201ENST00000225964 NXPH4O95158 308 aa10.65□□□□□ -0.7
COL1A1-201ENST00000225964 HS3ST6Q96QI5 342 aa10.65□□□□□ -0.7
COL1A1-201ENST00000225964 IGHV1OR15-1A0A075B7D0 117 aa10.65□□□□□ -0.7
COL1A1-201ENST00000225964 FAM120AOSQ5T036 256 aa10.65□□□□□ -0.7
COL1A1-201ENST00000225964 GAGE2BQ13066 116 aa10.65□□□□□ -0.71
COL1A1-201ENST00000225964 FER1L5A0AVI2 2057 aa10.64□□□□□ -0.71
COL1A1-201ENST00000225964 HIST1H2BLQ99880 126 aa10.64□□□□□ -0.71
COL1A1-201ENST00000225964 REG4Q9BYZ8 158 aa10.64□□□□□ -0.71
COL1A1-201ENST00000225964 KLF5Q13887 457 aaPredicted RBP10.64□□□□□ -0.71
COL1A1-201ENST00000225964 DKK4Q9UBT3 224 aa10.64□□□□□ -0.71
COL1A1-201ENST00000225964 TMEM213A2RRL7 107 aa10.64□□□□□ -0.71
COL1A1-201ENST00000225964 C8orf86Q6ZUL3 223 aa10.64□□□□□ -0.71
COL1A1-201ENST00000225964 NDUFAF3Q9BU61 184 aa10.64□□□□□ -0.71
COL1A1-201ENST00000225964 KIF26BQ2KJY2 2108 aa10.63□□□□□ -0.71
COL1A1-201ENST00000225964 ANGP03950 147 aaKnown RBP10.63□□□□□ -0.71
COL1A1-201ENST00000225964 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
COL1A1-201ENST00000225964 H3BMM0 161 aa10.63□□□□□ -0.71
COL1A1-201ENST00000225964 PDE6HQ13956 83 aa10.63□□□□□ -0.71
COL1A1-201ENST00000225964 UBE2WQ96B02 151 aa10.63□□□□□ -0.71
COL1A1-201ENST00000225964 IGKV1OR2-108A0A075B7D4 117 aa10.63□□□□□ -0.71
COL1A1-201ENST00000225964 PRSS29PA6NIE9 313 aa10.63□□□□□ -0.71
COL1A1-201ENST00000225964 TAL2Q16559 108 aa10.63□□□□□ -0.71
COL1A1-201ENST00000225964 CYTL1Q9NRR1 136 aa10.63□□□□□ -0.71
COL1A1-201ENST00000225964 CHAC1Q9BUX1 264 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 IGKV2D-24A0A075B6R9 120 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 TRAV26-2A0A0B4J265 109 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 A0A0G2JRQ6 117 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 A0A0J9YY99 117 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 SYS1-DBNDD2H3BUS1 97 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 UBE2BP63146 152 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 DUX4L9Q6RFH8 374 aaPredicted RBP10.62□□□□□ -0.71
COL1A1-201ENST00000225964 NDUFS5O43920 106 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 ZNF318Q5VUA4 2279 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 IGKV1-39P01597 117 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 IGKV1D-39P04432 117 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 HIST3H2BBQ8N257 126 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 TMEM141Q96I45 108 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 C9JAW5 83 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 NDUFA4O00483 81 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 PFN1P07737 140 aaKnown RBP10.62□□□□□ -0.71
COL1A1-201ENST00000225964 TEX36Q5VZQ5 186 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 ZNF833PQ6ZTB9 187 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 SCRT2Q9NQ03 307 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 CDKN1BP46527 198 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 ZC2HC1BQ5TFG8 222 aa10.62□□□□□ -0.71
COL1A1-201ENST00000225964 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.61□□□□□ -0.71
COL1A1-201ENST00000225964 MMP23AO75900 390 aa10.61□□□□□ -0.71
COL1A1-201ENST00000225964 TRAV1-1A0A0B4J248 108 aa10.61□□□□□ -0.71
COL1A1-201ENST00000225964 FNDC10F2Z333 226 aa10.61□□□□□ -0.71
COL1A1-201ENST00000225964 LY96Q9Y6Y9 160 aa10.61□□□□□ -0.71
COL1A1-201ENST00000225964 TPRP12270 2363 aaKnown RBP10.61□□□□□ -0.71
COL1A1-201ENST00000225964 UBE2CO00762 179 aa10.61□□□□□ -0.71
COL1A1-201ENST00000225964 TSSC4Q9Y5U2 329 aaPredicted RBP10.61□□□□□ -0.71
COL1A1-201ENST00000225964 TCF15Q12870 199 aa10.61□□□□□ -0.71
COL1A1-201ENST00000225964 GFRA4Q9GZZ7 299 aa10.61□□□□□ -0.71
COL1A1-201ENST00000225964 FNDC1Q4ZHG4 1894 aaPredicted RBP10.61□□□□□ -0.71
COL1A1-201ENST00000225964 FREM3P0C091 2139 aa10.6□□□□□ -0.71
COL1A1-201ENST00000225964 HLA-DRB4P13762 266 aa10.6□□□□□ -0.71
COL1A1-201ENST00000225964 HLA-DRB4X5D2U9 266 aa10.6□□□□□ -0.71
COL1A1-201ENST00000225964 A0A1B0GW64 132 aa10.6□□□□□ -0.71
COL1A1-201ENST00000225964 SOCS3O14543 225 aa10.6□□□□□ -0.71
COL1A1-201ENST00000225964 KIR3DS1Q14943 382 aa10.6□□□□□ -0.71
COL1A1-201ENST00000225964 TMEM256Q8N2U0 113 aa10.6□□□□□ -0.71
COL1A1-201ENST00000225964 Q8TCH9 128 aa10.6□□□□□ -0.71
COL1A1-201ENST00000225964 MPDZO75970 2070 aa10.6□□□□□ -0.71
COL1A1-201ENST00000225964 IGLV2-23P01705 113 aa10.6□□□□□ -0.71
COL1A1-201ENST00000225964 Q9HAA7 133 aa10.6□□□□□ -0.71
COL1A1-201ENST00000225964 ZSWIM8A7E2V4 1837 aa10.6□□□□□ -0.71
COL1A1-201ENST00000225964 MGAMO43451 1857 aa10.6□□□□□ -0.71
COL1A1-201ENST00000225964 YPEL3P61236 119 aaPredicted RBP10.6□□□□□ -0.71
COL1A1-201ENST00000225964 CD5LO43866 347 aa10.59□□□□□ -0.71
COL1A1-201ENST00000225964 TRBV24-1A0A075B6N3 115 aa10.59□□□□□ -0.71
COL1A1-201ENST00000225964 C3orf79P0CE67 100 aa10.59□□□□□ -0.71
COL1A1-201ENST00000225964 NEGR1Q7Z3B1 354 aa10.59□□□□□ -0.71
COL1A1-201ENST00000225964 QRFPP83859 136 aa10.59□□□□□ -0.71
COL1A1-201ENST00000225964 FANCMQ8IYD8 2048 aa10.59□□□□□ -0.71
COL1A1-201ENST00000225964 LOC105371267A0A1B0GV96 52 aa10.58□□□□□ -0.71
COL1A1-201ENST00000225964 PRSS46E5RG02 174 aa10.58□□□□□ -0.71
COL1A1-201ENST00000225964 C17orf58Q2M2W7 97 aa10.58□□□□□ -0.72
COL1A1-201ENST00000225964 ATP6V0BQ99437 205 aa10.58□□□□□ -0.72
COL1A1-201ENST00000225964 NOP10Q9NPE3 64 aaKnown RBP10.58□□□□□ -0.72
COL1A1-201ENST00000225964 NDUFA4L2Q9NRX3 87 aa10.58□□□□□ -0.72
COL1A1-201ENST00000225964 HEATR1Q9H583 2144 aaKnown RBP10.58□□□□□ -0.72
COL1A1-201ENST00000225964 FOXL2NBQ6ZUU3 175 aa10.58□□□□□ -0.72
COL1A1-201ENST00000225964 Q6ZQT7 251 aa10.58□□□□□ -0.72
COL1A1-201ENST00000225964 DEFB105AQ8NG35 78 aa10.58□□□□□ -0.72
COL1A1-201ENST00000225964 TMEM14BQ9NUH8 114 aa10.58□□□□□ -0.72
COL1A1-201ENST00000225964 RPL18AQ02543 176 aaKnown RBP10.58□□□□□ -0.72
COL1A1-201ENST00000225964 STPG4Q8N801 248 aa10.58□□□□□ -0.72
COL1A1-201ENST00000225964 HOXB4P17483 251 aaPredicted RBP10.57□□□□□ -0.72
COL1A1-201ENST00000225964 PRB1P04280 392 aa10.57□□□□□ -0.72
COL1A1-201ENST00000225964 ZNF134P52741 427 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms