RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 ASCC3Q8N3C0 2202 aaKnown RBP8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 IGKV3D-7A0A0C4DH55 119 aa8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 F8VRH5 84 aa8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 NUPR1O60356 82 aa8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 SRSF2Q01130 221 aaKnown RBP8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 TMEM133Q9H2Q1 129 aa8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 A0A087WWL8 130 aa8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 A0A087WX48 190 aa8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 F6UB75 175 aa8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 IGHV3-11P01762 117 aa8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 PSG7Q13046 419 aa8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 CENPVQ7Z7K6 275 aaPredicted RBP8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 C8orf49Q96NF6 230 aa8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 ZNF747Q9BV97 191 aa8.87□□□□□ -0.99
KCNMA1-259ENST00000639406 AHRRA9YTQ3 701 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 NDUFV3P56181 108 aaKnown RBP8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 FOXF2Q12947 444 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 WFDC9Q8NEX5 89 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 SHANK3Q9BYB0 1731 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 METRNQ9UJH8 293 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 IGHV3OR16-10A0A075B7F0 116 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 PSMB8P28062 276 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 Q6ZRM9 215 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 SSC4DQ8WTU2 575 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 LINC00527Q9UJ94 153 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 PTPRZ1P23471 2315 aaPredicted RBP8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 CCL3L1P16619 93 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 NDUFA12Q9UI09 145 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 IGKV1-27A0A075B6S5 117 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 RNASE2P10153 161 aaKnown RBP8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 TRAV13-2A0A0B4J235 113 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 J3QQQ9 107 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 RBX1P62877 108 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 CR1LQ2VPA4 569 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 C5orf24Q7Z6I8 188 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 FDCSPQ8NFU4 85 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 LYPD6BQ8NI32 183 aa8.86□□□□□ -0.99
KCNMA1-259ENST00000639406 DLEC1Q9Y238 1755 aa8.85□□□□□ -0.99
KCNMA1-259ENST00000639406 M0R1W7 72 aa8.85□□□□□ -0.99
KCNMA1-259ENST00000639406 PRB2P02812 416 aaPredicted RBP8.85□□□□□ -0.99
KCNMA1-259ENST00000639406 IGFL4Q6B9Z1 124 aa8.85□□□□□ -0.99
KCNMA1-259ENST00000639406 CKAP5Q14008 2032 aa8.85□□□□□ -0.99
KCNMA1-259ENST00000639406 C10orf55Q5SWW7 151 aa8.85□□□□□ -0.99
KCNMA1-259ENST00000639406 MYOD1P15172 320 aa8.85□□□□□ -0.99
KCNMA1-259ENST00000639406 Q6ZUT4 128 aa8.85□□□□□ -0.99
KCNMA1-259ENST00000639406 TRPT1Q86TN4 253 aaKnown RBP8.85□□□□□ -0.99
KCNMA1-259ENST00000639406 CLUHP3Q96NS8 147 aa8.85□□□□□ -0.99
KCNMA1-259ENST00000639406 TRBV25-1A0A075B6N4 114 aa8.84□□□□□ -0.99
KCNMA1-259ENST00000639406 HOXD3P31249 432 aaPredicted RBP8.84□□□□□ -0.99
KCNMA1-259ENST00000639406 LINC00477Q96M19 166 aa8.84□□□□□ -0.99
KCNMA1-259ENST00000639406 DOCK2Q92608 1830 aa8.84□□□□□ -0.99
KCNMA1-259ENST00000639406 TRAV26-2A0A0B4J265 109 aa8.84□□□□□ -0.99
KCNMA1-259ENST00000639406 RPL36AP83881 106 aaKnown RBP8.84□□□□□ -0.99
KCNMA1-259ENST00000639406 STHQ8IWL8 128 aa8.84□□□□□ -0.99
KCNMA1-259ENST00000639406 RPL36ALQ969Q0 106 aaKnown RBP8.84□□□□□ -0.99
KCNMA1-259ENST00000639406 TAF1P21675 1872 aa8.84□□□□□ -0.99
KCNMA1-259ENST00000639406 EGR2P11161 476 aaPredicted RBP8.84□□□□□ -0.99
KCNMA1-259ENST00000639406 ARAP2Q8WZ64 1704 aa8.84□□□□□ -0.99
KCNMA1-259ENST00000639406 QSER1Q2KHR3 1735 aa8.84□□□□□ -0.99
KCNMA1-259ENST00000639406 CECR9P0C854 216 aa8.84□□□□□ -0.99
KCNMA1-259ENST00000639406 SRRM4A7MD48 611 aaKnown RBP8.83□□□□□ -1
KCNMA1-259ENST00000639406 COX6A1P12074 109 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 Q6ZT83 130 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 RNF144BQ7Z419 303 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 LAMA2P24043 3122 aaKnown RBP8.83□□□□□ -1
KCNMA1-259ENST00000639406 K7EN84 100 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 MT-ATP8P03928 68 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 HTN3P15516 51 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 SLC22A18ASQ8N1D0 253 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 TMEM105Q8N8V8 129 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 TRAV25A0A0B4J276 109 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 LINC00473A8K010 186 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 K7EMI3 77 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 ATP5G1P05496 136 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 PAX9P55771 341 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 PAX8Q06710 450 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 WIPF2Q8TF74 440 aaPredicted RBP8.83□□□□□ -1
KCNMA1-259ENST00000639406 KNL1Q8NG31 2342 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 DNAH12Q6ZR08 3092 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 EFNA4P52798 201 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 FXYD2P54710 66 aa8.83□□□□□ -1
KCNMA1-259ENST00000639406 ZNF493Q6ZR52 646 aa8.82□□□□□ -1
KCNMA1-259ENST00000639406 CELA3BP08861 270 aa8.82□□□□□ -1
KCNMA1-259ENST00000639406 ASPHD1Q5U4P2 390 aa8.82□□□□□ -1
KCNMA1-259ENST00000639406 SPTSSBQ8NFR3 76 aa8.82□□□□□ -1
KCNMA1-259ENST00000639406 CHCHD2Q9Y6H1 151 aaPredicted RBP8.82□□□□□ -1
KCNMA1-259ENST00000639406 ARFGEF1Q9Y6D6 1849 aa8.82□□□□□ -1
KCNMA1-259ENST00000639406 PFN2P35080 140 aa8.82□□□□□ -1
KCNMA1-259ENST00000639406 PCOLCEQ15113 449 aa8.82□□□□□ -1
KCNMA1-259ENST00000639406 LINC01620Q4KN68 170 aa8.82□□□□□ -1
KCNMA1-259ENST00000639406 PYGO2Q9BRQ0 406 aa8.82□□□□□ -1
KCNMA1-259ENST00000639406 ORMDL1Q9P0S3 153 aa8.82□□□□□ -1
KCNMA1-259ENST00000639406 TGFBR3LH3BV60 316 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 MLANAQ16655 118 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 hADV29S1A0JD25 119 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 I3L3M4 83 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 NDPQ00604 133 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 ZIC4Q8N9L1 334 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 MSRB2Q9Y3D2 182 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 ATAD5Q96QE3 1844 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms