RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 IGLV2-11P01706 119 aa8.34□□□□□ -1.07
TARDBP-230ENST00000639083 IER3P46695 156 aa8.34□□□□□ -1.07
TARDBP-230ENST00000639083 SLC35B1P78383 322 aa8.34□□□□□ -1.07
TARDBP-230ENST00000639083 GFI1BQ5VTD9 330 aa8.34□□□□□ -1.07
TARDBP-230ENST00000639083 KRTAP1-3Q8IUG1 177 aa8.34□□□□□ -1.07
TARDBP-230ENST00000639083 TRAPPC1Q9Y5R8 145 aa8.34□□□□□ -1.07
TARDBP-230ENST00000639083 IGHV3-66A0A0C4DH42 116 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 PDE6HQ13956 83 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 LINC00322Q6ZN03 302 aaPredicted RBP8.33□□□□□ -1.08
TARDBP-230ENST00000639083 FAM231DQ6ZW35 169 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 Q71RC1 249 aaPredicted RBP8.33□□□□□ -1.08
TARDBP-230ENST00000639083 PRNTQ86SH4 94 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 HELZ2Q9BYK8 2649 aaKnown RBP8.33□□□□□ -1.08
TARDBP-230ENST00000639083 CREBBPQ92793 2442 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 TRAV9-1A0A075B6T8 112 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 IGHV3OR16-13A0A075B7E8 117 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 IGHV3-74A0A0B4J1X5 117 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 SMIM27A0A1W2PRY6 76 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 ZNF207O43670 478 aaKnown RBP8.33□□□□□ -1.08
TARDBP-230ENST00000639083 BUB3O43684 328 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 GATCO43716 136 aaKnown RBP8.33□□□□□ -1.08
TARDBP-230ENST00000639083 CDX1P47902 265 aaPredicted RBP8.33□□□□□ -1.08
TARDBP-230ENST00000639083 LCNL1Q6ZST4 164 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 SMIM12Q96EX1 92 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 PSMG3-AS1Q96PY0 264 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 AAMDCQ9H7C9 122 aa8.33□□□□□ -1.08
TARDBP-230ENST00000639083 IGHV3-49A0A0A0MS15 119 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 IFITM10A6NMD0 228 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 DIRC3C9JPN6 131 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 FSHBP01225 129 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 TRBV12-3P01733 135 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 APOHP02749 345 aaPredicted RBP8.32□□□□□ -1.08
TARDBP-230ENST00000639083 PF4V1P10720 104 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 CBLN1P23435 193 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 RELQ04864 619 aaPredicted RBP8.32□□□□□ -1.08
TARDBP-230ENST00000639083 TMEM95Q3KNT9 176 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 PDZD11Q5EBL8 140 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 IGFL4Q6B9Z1 124 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 Q86TA4 180 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 CIARTQ8N365 385 aaPredicted RBP8.32□□□□□ -1.08
TARDBP-230ENST00000639083 MBD6Q96DN6 1003 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 ASCL2Q99929 193 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 PRRC2AP48634 2157 aaKnown RBP8.32□□□□□ -1.08
TARDBP-230ENST00000639083 CR1P17927 2039 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 IGHV3-11P01762 117 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 S100A7P31151 101 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 ARL3P36405 182 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 MEOX2P50222 304 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 PRSS57Q6UWY2 283 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 TMEM183AQ8IXX5 376 aa8.32□□□□□ -1.08
TARDBP-230ENST00000639083 H3BUA1 57 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 K7EQM0 130 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 BRI3O95415 125 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 PSG9Q00887 426 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 PSG3Q16557 428 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 GRAMD2BQ96HH9 432 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 USMG5Q96IX5 58 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 ATP6V0BQ99437 205 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 GPR61Q9BZJ8 451 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 XKRY2A2RUG3 117 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 ZNF785A8K8V0 405 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 IGLV1-40P01703 118 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 CYB5R2Q6BCY4 276 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 TMEM75Q8N9X5 138 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 WFDC11Q8NEX6 87 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 METTL26Q96S19 204 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 PSG8Q9UQ74 426 aa8.31□□□□□ -1.08
TARDBP-230ENST00000639083 C19orf71A6NCJ1 209 aa8.3□□□□□ -1.08
TARDBP-230ENST00000639083 IGHG4P01861 327 aa8.3□□□□□ -1.08
TARDBP-230ENST00000639083 HLA-DMBP28068 263 aa8.3□□□□□ -1.08
TARDBP-230ENST00000639083 CSN1S1P47710 185 aa8.3□□□□□ -1.08
TARDBP-230ENST00000639083 RAB9AP51151 201 aa8.3□□□□□ -1.08
TARDBP-230ENST00000639083 CFHR3Q02985 330 aa8.3□□□□□ -1.08
TARDBP-230ENST00000639083 MRPL54Q6P161 138 aaKnown RBP8.3□□□□□ -1.08
TARDBP-230ENST00000639083 Q6YL49 198 aa8.3□□□□□ -1.08
TARDBP-230ENST00000639083 HIST3H2BBQ8N257 126 aa8.3□□□□□ -1.08
TARDBP-230ENST00000639083 TMEM190Q8WZ59 177 aa8.3□□□□□ -1.08
TARDBP-230ENST00000639083 DAZAP1Q96EP5 407 aaKnown RBP8.3□□□□□ -1.08
TARDBP-230ENST00000639083 PRSS22Q9GZN4 317 aa8.3□□□□□ -1.08
TARDBP-230ENST00000639083 CCDC168Q8NDH2 2452 aa8.3□□□□□ -1.08
TARDBP-230ENST00000639083 TRBV6-1A0A0K0K1D8 114 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 IZUMO1RA6ND01 250 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 SNURFLB1AK76 121 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 P01737 135 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 S100A8P05109 93 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 CDPF1Q6NVV7 123 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 UNQ9165/PRO28630Q6UXU0 137 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 C9orf139Q6ZV77 190 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 OR4X2Q8NGF9 303 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 OR5R1Q8NH85 324 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 TSKUQ8WUA8 353 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 NEU1Q99519 415 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 MRPL18Q9H0U6 180 aaKnown RBP8.29□□□□□ -1.08
TARDBP-230ENST00000639083 ZNF331Q9NQX6 463 aaPredicted RBP8.29□□□□□ -1.08
TARDBP-230ENST00000639083 ZFP30Q9Y2G7 519 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 ITPR3Q14573 2671 aa8.29□□□□□ -1.08
TARDBP-230ENST00000639083 IGKV2-40A0A087WW87 121 aaPredicted RBP8.29□□□□□ -1.08
TARDBP-230ENST00000639083 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.29□□□□□ -1.08
TARDBP-230ENST00000639083 ZNF705FA8MVS1 300 aaPredicted RBP8.29□□□□□ -1.08
TARDBP-230ENST00000639083 IGKV2D-40P01614 121 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms