RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 C20orf144Q9BQM9 153 aa12.72□□□□□ -0.37
CTSD-209ENST00000637158 SMCO3A2RU48 225 aa12.71□□□□□ -0.37
CTSD-209ENST00000637158 SFT2D2O95562 160 aa12.71□□□□□ -0.37
CTSD-209ENST00000637158 OR5G3P0C626 314 aa12.71□□□□□ -0.37
CTSD-209ENST00000637158 LINC00869P0C866 280 aa12.71□□□□□ -0.37
CTSD-209ENST00000637158 TMBIM6P55061 237 aa12.71□□□□□ -0.37
CTSD-209ENST00000637158 SPATA12Q7Z6I5 190 aa12.71□□□□□ -0.37
CTSD-209ENST00000637158 GNPNAT1Q96EK6 184 aaPredicted RBP12.71□□□□□ -0.37
CTSD-209ENST00000637158 NOP10Q9NPE3 64 aaKnown RBP12.71□□□□□ -0.37
CTSD-209ENST00000637158 A0A1W2PPQ1 181 aa12.7□□□□□ -0.38
CTSD-209ENST00000637158 H3BP45 60 aa12.7□□□□□ -0.38
CTSD-209ENST00000637158 HOXB5P09067 269 aa12.7□□□□□ -0.38
CTSD-209ENST00000637158 CXCL2P19875 107 aa12.7□□□□□ -0.38
CTSD-209ENST00000637158 M6PRP20645 277 aa12.7□□□□□ -0.38
CTSD-209ENST00000637158 TNFSF8P32971 234 aa12.7□□□□□ -0.38
CTSD-209ENST00000637158 OR5I1Q13606 314 aa12.7□□□□□ -0.38
CTSD-209ENST00000637158 CCDC28AQ8IWP9 274 aa12.7□□□□□ -0.38
CTSD-209ENST00000637158 RNASE8Q8TDE3 154 aaKnown RBP12.7□□□□□ -0.38
CTSD-209ENST00000637158 ANXA7P20073 488 aaKnown RBP12.69□□□□□ -0.38
CTSD-209ENST00000637158 PXDC1Q5TGL8 231 aa12.69□□□□□ -0.38
CTSD-209ENST00000637158 RXFP4Q8TDU9 374 aa12.69□□□□□ -0.38
CTSD-209ENST00000637158 RPUSD4Q96CM3 377 aaKnown RBP12.69□□□□□ -0.38
CTSD-209ENST00000637158 UPK3BQ9BT76 320 aa12.69□□□□□ -0.38
CTSD-209ENST00000637158 Q9H3A6 140 aa12.69□□□□□ -0.38
CTSD-209ENST00000637158 SCRT2Q9NQ03 307 aa12.69□□□□□ -0.38
CTSD-209ENST00000637158 TRAV26-1A0A087WT03 109 aa12.68□□□□□ -0.38
CTSD-209ENST00000637158 H3BNG1 76 aa12.68□□□□□ -0.38
CTSD-209ENST00000637158 ID3Q02535 119 aa12.68□□□□□ -0.38
CTSD-209ENST00000637158 PPP1R1AQ13522 171 aa12.68□□□□□ -0.38
CTSD-209ENST00000637158 LCN15Q6UWW0 184 aa12.68□□□□□ -0.38
CTSD-209ENST00000637158 UHRF2Q96PU4 802 aa12.68□□□□□ -0.38
CTSD-209ENST00000637158 SLC50A1Q9BRV3 221 aa12.68□□□□□ -0.38
CTSD-209ENST00000637158 SLIRPQ9GZT3 109 aaKnown RBP12.68□□□□□ -0.38
CTSD-209ENST00000637158 NPVFQ9HCQ7 196 aa12.68□□□□□ -0.38
CTSD-209ENST00000637158 PSENENQ9NZ42 101 aa12.68□□□□□ -0.38
CTSD-209ENST00000637158 FNDC10F2Z333 226 aa12.67□□□□□ -0.38
CTSD-209ENST00000637158 NOL3O60936 208 aaKnown RBP12.67□□□□□ -0.38
CTSD-209ENST00000637158 UBE2MP61081 183 aaKnown RBP12.67□□□□□ -0.38
CTSD-209ENST00000637158 MCFD2Q8NI22 146 aa12.67□□□□□ -0.38
CTSD-209ENST00000637158 ARL6Q9H0F7 186 aa12.67□□□□□ -0.38
CTSD-209ENST00000637158 HERC1Q15751 4861 aa12.67□□□□□ -0.38
CTSD-209ENST00000637158 K7EPK0 472 aa12.66□□□□□ -0.38
CTSD-209ENST00000637158 RLN2P04090 185 aa12.66□□□□□ -0.38
CTSD-209ENST00000637158 DLK1P80370 383 aa12.66□□□□□ -0.38
CTSD-209ENST00000637158 PYDC2Q56P42 97 aa12.66□□□□□ -0.38
CTSD-209ENST00000637158 TEPPQ6URK8 271 aa12.66□□□□□ -0.38
CTSD-209ENST00000637158 CCDC190Q86UF4 302 aa12.66□□□□□ -0.38
CTSD-209ENST00000637158 LINC00612Q8N6U2 182 aa12.66□□□□□ -0.38
CTSD-209ENST00000637158 TRIM63Q969Q1 353 aa12.66□□□□□ -0.38
CTSD-209ENST00000637158 SMIM8Q96KF7 97 aa12.66□□□□□ -0.38
CTSD-209ENST00000637158 ARV1Q9H2C2 271 aa12.66□□□□□ -0.38
CTSD-209ENST00000637158 PMS2P5A8MQ11 134 aa12.65□□□□□ -0.38
CTSD-209ENST00000637158 SNURFLB1AK76 121 aa12.65□□□□□ -0.38
CTSD-209ENST00000637158 POLR2GP62487 172 aaKnown RBP eCLIP12.65□□□□□ -0.38
CTSD-209ENST00000637158 C4orf46Q504U0 113 aa12.65□□□□□ -0.38
CTSD-209ENST00000637158 OR10P1Q8NGE3 313 aa12.65□□□□□ -0.38
CTSD-209ENST00000637158 ZNF331Q9NQX6 463 aaPredicted RBP12.65□□□□□ -0.38
CTSD-209ENST00000637158 MGAT4CQ9UBM8 478 aa12.65□□□□□ -0.38
CTSD-209ENST00000637158 ZNF701M0R085 212 aaPredicted RBP12.64□□□□□ -0.39
CTSD-209ENST00000637158 MRPS12O15235 138 aaKnown RBP12.64□□□□□ -0.39
CTSD-209ENST00000637158 BPIFA4PQ86YQ2 179 aa12.64□□□□□ -0.39
CTSD-209ENST00000637158 MRPS16Q9Y3D3 137 aaKnown RBP12.64□□□□□ -0.39
CTSD-209ENST00000637158 A0A0J9YY99 117 aa12.63□□□□□ -0.39
CTSD-209ENST00000637158 GOSR2O14653 212 aa12.63□□□□□ -0.39
CTSD-209ENST00000637158 SSSCA1O60232 199 aa12.63□□□□□ -0.39
CTSD-209ENST00000637158 RRAS2P62070 204 aaPredicted RBP12.63□□□□□ -0.39
CTSD-209ENST00000637158 ESRGQ1W209 222 aa12.63□□□□□ -0.39
CTSD-209ENST00000637158 PATE2Q6UY27 113 aa12.63□□□□□ -0.39
CTSD-209ENST00000637158 LINC00305Q7Z4B0 112 aa12.63□□□□□ -0.39
CTSD-209ENST00000637158 ZNF546Q86UE3 836 aa12.63□□□□□ -0.39
CTSD-209ENST00000637158 GAGE12BA1L429 117 aa12.62□□□□□ -0.39
CTSD-209ENST00000637158 GAGE7O76087 117 aa12.62□□□□□ -0.39
CTSD-209ENST00000637158 GAGE12FP0CL80 117 aa12.62□□□□□ -0.39
CTSD-209ENST00000637158 GAGE12GP0CL81 117 aa12.62□□□□□ -0.39
CTSD-209ENST00000637158 GAGE12IP0CL82 117 aa12.62□□□□□ -0.39
CTSD-209ENST00000637158 GFI1BQ5VTD9 330 aa12.62□□□□□ -0.39
CTSD-209ENST00000637158 TMEM14EPQ6UXP3 125 aa12.62□□□□□ -0.39
CTSD-209ENST00000637158 KRTAP1-5Q9BYS1 174 aa12.62□□□□□ -0.39
CTSD-209ENST00000637158 PXMP4Q9Y6I8 212 aa12.62□□□□□ -0.39
CTSD-209ENST00000637158 C9orf170A2RU37 121 aa12.61□□□□□ -0.39
CTSD-209ENST00000637158 METTL15P1P0C7V9 234 aa12.61□□□□□ -0.39
CTSD-209ENST00000637158 HOXA5P20719 270 aa12.61□□□□□ -0.39
CTSD-209ENST00000637158 TAS2R30P59541 319 aa12.61□□□□□ -0.39
CTSD-209ENST00000637158 DAZ2Q13117 558 aaKnown RBP12.61□□□□□ -0.39
CTSD-209ENST00000637158 ODF3Q96PU9 254 aa12.61□□□□□ -0.39
CTSD-209ENST00000637158 PYGO2Q9BRQ0 406 aa12.61□□□□□ -0.39
CTSD-209ENST00000637158 GGACTQ9BVM4 153 aa12.61□□□□□ -0.39
CTSD-209ENST00000637158 H3BMQ9 156 aa12.6□□□□□ -0.39
CTSD-209ENST00000637158 TSC22D2O75157 780 aa12.6□□□□□ -0.39
CTSD-209ENST00000637158 S100A5P33763 92 aa12.6□□□□□ -0.39
CTSD-209ENST00000637158 LEPP41159 167 aa12.6□□□□□ -0.39
CTSD-209ENST00000637158 KRTAP10-2P60368 255 aa12.6□□□□□ -0.39
CTSD-209ENST00000637158 SLC38A11Q08AI6 406 aa12.6□□□□□ -0.39
CTSD-209ENST00000637158 PTTG2Q9NZH5 202 aa12.6□□□□□ -0.39
CTSD-209ENST00000637158 COX7A2P2O60397 106 aa12.59□□□□□ -0.39
CTSD-209ENST00000637158 KIR3DS1Q14943 382 aa12.59□□□□□ -0.39
CTSD-209ENST00000637158 GUK1Q16774 197 aa12.59□□□□□ -0.39
CTSD-209ENST00000637158 PGPEP1Q9NXJ5 209 aa12.59□□□□□ -0.39
CTSD-209ENST00000637158 ZNF586Q9NXT0 402 aa12.59□□□□□ -0.39
CTSD-209ENST00000637158 V9GYH0 126 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms