RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 ATXN8Q156A1 80 aa16.35■□□□□ 0.21
FGFR1-241ENST00000619564 SS18Q15532 418 aa16.35■□□□□ 0.21
FGFR1-241ENST00000619564 TRAV8-1A0A0A6YYK1 113 aa16.34■□□□□ 0.21
FGFR1-241ENST00000619564 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.34■□□□□ 0.21
FGFR1-241ENST00000619564 MS4A6AQ9H2W1 248 aa16.34■□□□□ 0.21
FGFR1-241ENST00000619564 J3QLI3 93 aa16.34■□□□□ 0.21
FGFR1-241ENST00000619564 GATD1Q8NB37 220 aa16.34■□□□□ 0.21
FGFR1-241ENST00000619564 NUP35Q8NFH5 326 aa16.34■□□□□ 0.21
FGFR1-241ENST00000619564 DOPEY2Q9Y3R5 2298 aa16.34■□□□□ 0.21
FGFR1-241ENST00000619564 HSD52Q0P140 79 aa16.34■□□□□ 0.21
FGFR1-241ENST00000619564 A0A087WWL8 130 aa16.33■□□□□ 0.2
FGFR1-241ENST00000619564 NPC2P61916 151 aa16.33■□□□□ 0.2
FGFR1-241ENST00000619564 MLANAQ16655 118 aa16.33■□□□□ 0.2
FGFR1-241ENST00000619564 NDUFB8O95169 186 aa16.33■□□□□ 0.2
FGFR1-241ENST00000619564 CFHR2P36980 270 aa16.33■□□□□ 0.2
FGFR1-241ENST00000619564 MED12Q93074 2177 aa16.33■□□□□ 0.2
FGFR1-241ENST00000619564 FNDC4Q9H6D8 234 aaPredicted RBP16.32■□□□□ 0.2
FGFR1-241ENST00000619564 ZNRD1Q9P1U0 126 aa16.32■□□□□ 0.2
FGFR1-241ENST00000619564 CLDN16Q9Y5I7 305 aa16.32■□□□□ 0.2
FGFR1-241ENST00000619564 A0A0G2JRQ6 117 aa16.32■□□□□ 0.2
FGFR1-241ENST00000619564 Q86TA4 180 aa16.32■□□□□ 0.2
FGFR1-241ENST00000619564 CDK2AP2O75956 126 aa16.32■□□□□ 0.2
FGFR1-241ENST00000619564 DMRTA1Q5VZB9 504 aa16.32■□□□□ 0.2
FGFR1-241ENST00000619564 IL17RELQ6ZVW7 336 aa16.32■□□□□ 0.2
FGFR1-241ENST00000619564 TRAV13-1A0A0B4J241 112 aa16.31■□□□□ 0.2
FGFR1-241ENST00000619564 LMO1P25800 156 aa16.31■□□□□ 0.2
FGFR1-241ENST00000619564 ZNF479Q96JC4 524 aa16.31■□□□□ 0.2
FGFR1-241ENST00000619564 ETV2O00321 342 aaPredicted RBP16.31■□□□□ 0.2
FGFR1-241ENST00000619564 XCL2Q9UBD3 114 aa16.31■□□□□ 0.2
FGFR1-241ENST00000619564 PRR31Q5SQ13 230 aa16.31■□□□□ 0.2
FGFR1-241ENST00000619564 LIME1Q9H400 295 aa16.31■□□□□ 0.2
FGFR1-241ENST00000619564 NBL1P41271 181 aa16.31■□□□□ 0.2
FGFR1-241ENST00000619564 CXCL1P09341 107 aa16.3■□□□□ 0.2
FGFR1-241ENST00000619564 YPEL3P61236 119 aaPredicted RBP16.3■□□□□ 0.2
FGFR1-241ENST00000619564 DAD1P61803 113 aa16.3■□□□□ 0.2
FGFR1-241ENST00000619564 FAM90A2PQ658T7 463 aa16.3■□□□□ 0.2
FGFR1-241ENST00000619564 POLEQ07864 2286 aa16.3■□□□□ 0.2
FGFR1-241ENST00000619564 COL4A6Q14031 1691 aa16.3■□□□□ 0.2
FGFR1-241ENST00000619564 F8WEM9 126 aa16.3■□□□□ 0.2
FGFR1-241ENST00000619564 SPOCK3Q9BQ16 436 aa16.3■□□□□ 0.2
FGFR1-241ENST00000619564 NDUFAF3Q9BU61 184 aa16.29■□□□□ 0.2
FGFR1-241ENST00000619564 A8MWV9 139 aa16.29■□□□□ 0.2
FGFR1-241ENST00000619564 Q6ZRM9 215 aa16.29■□□□□ 0.2
FGFR1-241ENST00000619564 HS3ST6Q96QI5 342 aa16.29■□□□□ 0.2
FGFR1-241ENST00000619564 NCOR1P1Q9H4R4 102 aa16.29■□□□□ 0.2
FGFR1-241ENST00000619564 TRPT1Q86TN4 253 aaKnown RBP16.29■□□□□ 0.2
FGFR1-241ENST00000619564 ARMS2P0C7Q2 107 aa16.29■□□□□ 0.2
FGFR1-241ENST00000619564 HIST1H2BLQ99880 126 aa16.29■□□□□ 0.2
FGFR1-241ENST00000619564 F5H768 121 aa16.28■□□□□ 0.2
FGFR1-241ENST00000619564 RHODO00212 210 aa16.28■□□□□ 0.2
FGFR1-241ENST00000619564 ZNF833PQ6ZTB9 187 aa16.28■□□□□ 0.2
FGFR1-241ENST00000619564 TMEM158Q8WZ71 300 aa16.28■□□□□ 0.2
FGFR1-241ENST00000619564 MCRIP2Q9BUT9 160 aaKnown RBP16.28■□□□□ 0.2
FGFR1-241ENST00000619564 Q6ZR03 302 aa16.28■□□□□ 0.2
FGFR1-241ENST00000619564 TRAV8-4A0A0B4J246 113 aa16.28■□□□□ 0.2
FGFR1-241ENST00000619564 G3V318 75 aa16.28■□□□□ 0.2
FGFR1-241ENST00000619564 DMRTC2Q8IXT2 367 aaPredicted RBP16.28■□□□□ 0.2
FGFR1-241ENST00000619564 PROK2Q9HC23 129 aa16.28■□□□□ 0.2
FGFR1-241ENST00000619564 MYMXA0A1B0GTQ4 84 aa16.28■□□□□ 0.2
FGFR1-241ENST00000619564 DKK1O94907 266 aa16.28■□□□□ 0.2
FGFR1-241ENST00000619564 LY6G5BQ8NDX9 201 aa16.27■□□□□ 0.2
FGFR1-241ENST00000619564 HEATR1Q9H583 2144 aaKnown RBP16.27■□□□□ 0.2
FGFR1-241ENST00000619564 LOXP28300 417 aaPredicted RBP16.27■□□□□ 0.2
FGFR1-241ENST00000619564 E9PQ18 207 aa16.27■□□□□ 0.19
FGFR1-241ENST00000619564 FHL1Q13642 323 aa16.27■□□□□ 0.19
FGFR1-241ENST00000619564 MST1LQ2TV78 715 aa16.27■□□□□ 0.19
FGFR1-241ENST00000619564 TMEM14BQ9NUH8 114 aa16.27■□□□□ 0.19
FGFR1-241ENST00000619564 LAMTOR3Q9UHA4 124 aa16.27■□□□□ 0.19
FGFR1-241ENST00000619564 A0A1B0GV72 72 aa16.26■□□□□ 0.19
FGFR1-241ENST00000619564 NDUFA4L2Q9NRX3 87 aa16.26■□□□□ 0.19
FGFR1-241ENST00000619564 ANK1P16157 1881 aa16.26■□□□□ 0.19
FGFR1-241ENST00000619564 AMN1Q8IY45 258 aa16.26■□□□□ 0.19
FGFR1-241ENST00000619564 SPINK13Q1W4C9 94 aa16.26■□□□□ 0.19
FGFR1-241ENST00000619564 C1orf122Q6ZSJ8 110 aa16.26■□□□□ 0.19
FGFR1-241ENST00000619564 Q71RC1 249 aaPredicted RBP16.26■□□□□ 0.19
FGFR1-241ENST00000619564 FNDC1Q4ZHG4 1894 aaPredicted RBP16.26■□□□□ 0.19
FGFR1-241ENST00000619564 IGKV1-6A0A0C4DH72 117 aa16.25■□□□□ 0.19
FGFR1-241ENST00000619564 LEPROTO15243 131 aa16.25■□□□□ 0.19
FGFR1-241ENST00000619564 TIMM21Q9BVV7 248 aa16.25■□□□□ 0.19
FGFR1-241ENST00000619564 TMEM75Q8N9X5 138 aa16.25■□□□□ 0.19
FGFR1-241ENST00000619564 GFRA4Q9GZZ7 299 aa16.25■□□□□ 0.19
FGFR1-241ENST00000619564 ABCA4P78363 2273 aa16.25■□□□□ 0.19
FGFR1-241ENST00000619564 DIDO1Q9BTC0 2240 aaKnown RBP16.25■□□□□ 0.19
FGFR1-241ENST00000619564 APOC4P55056 127 aa16.25■□□□□ 0.19
FGFR1-241ENST00000619564 VWA8A3KMH1 1905 aa16.25■□□□□ 0.19
FGFR1-241ENST00000619564 UBE2CO00762 179 aa16.25■□□□□ 0.19
FGFR1-241ENST00000619564 TEX36Q5VZQ5 186 aa16.25■□□□□ 0.19
FGFR1-241ENST00000619564 PRIMA1Q86XR5 153 aa16.25■□□□□ 0.19
FGFR1-241ENST00000619564 INS-IGF2F8WCM5 200 aa16.25■□□□□ 0.19
FGFR1-241ENST00000619564 SAMD5Q5TGI4 173 aa16.25■□□□□ 0.19
FGFR1-241ENST00000619564 SMKR1H3BMG3 65 aa16.24■□□□□ 0.19
FGFR1-241ENST00000619564 PRSS33Q8NF86 280 aa16.24■□□□□ 0.19
FGFR1-241ENST00000619564 GBF1Q92538 1859 aa16.24■□□□□ 0.19
FGFR1-241ENST00000619564 SSBP2P81877 361 aaPredicted RBP16.24■□□□□ 0.19
FGFR1-241ENST00000619564 C1orf194Q5T5A4 169 aa16.24■□□□□ 0.19
FGFR1-241ENST00000619564 HIST3H2BBQ8N257 126 aa16.24■□□□□ 0.19
FGFR1-241ENST00000619564 MEGF9Q9H1U4 602 aa16.24■□□□□ 0.19
FGFR1-241ENST00000619564 KNCNA6PVL3 124 aa16.24■□□□□ 0.19
FGFR1-241ENST00000619564 NDUFA4O00483 81 aa16.23■□□□□ 0.19
FGFR1-241ENST00000619564 TCTEX1D4Q5JR98 221 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms