RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 GFRA4Q9GZZ7 299 aa11.78□□□□□ -0.52
PTPN9-206ENST00000618819 ANKRD36A6QL64 1941 aa11.78□□□□□ -0.52
PTPN9-206ENST00000618819 VWC2Q2TAL6 325 aa11.78□□□□□ -0.52
PTPN9-206ENST00000618819 Q8N8P6 123 aa11.78□□□□□ -0.52
PTPN9-206ENST00000618819 IGHV4-4A0A075B6R2 117 aa11.78□□□□□ -0.52
PTPN9-206ENST00000618819 SH2D6Q7Z4S9 175 aa11.78□□□□□ -0.52
PTPN9-206ENST00000618819 ABCA3Q99758 1704 aa11.77□□□□□ -0.52
PTPN9-206ENST00000618819 MTCL1Q9Y4B5 1905 aaKnown RBP11.77□□□□□ -0.52
PTPN9-206ENST00000618819 THBDP07204 575 aa11.77□□□□□ -0.52
PTPN9-206ENST00000618819 TP53BP1Q12888 1972 aaPredicted RBP11.77□□□□□ -0.52
PTPN9-206ENST00000618819 DOCK5Q9H7D0 1870 aa11.77□□□□□ -0.52
PTPN9-206ENST00000618819 KLF2Q9Y5W3 355 aaPredicted RBP11.77□□□□□ -0.52
PTPN9-206ENST00000618819 IGKV3D-7A0A0C4DH55 119 aa11.77□□□□□ -0.53
PTPN9-206ENST00000618819 I3L3M4 83 aa11.77□□□□□ -0.53
PTPN9-206ENST00000618819 MRPL35Q9NZE8 188 aaKnown RBP11.77□□□□□ -0.53
PTPN9-206ENST00000618819 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.53
PTPN9-206ENST00000618819 IGHV1-18A0A0C4DH31 117 aa11.77□□□□□ -0.53
PTPN9-206ENST00000618819 PTPRZ1P23471 2315 aaPredicted RBP11.77□□□□□ -0.53
PTPN9-206ENST00000618819 CDKN1BP46527 198 aa11.77□□□□□ -0.53
PTPN9-206ENST00000618819 CLPSL2Q6UWE3 100 aa11.77□□□□□ -0.53
PTPN9-206ENST00000618819 LHFPL1Q86WI0 220 aa11.77□□□□□ -0.53
PTPN9-206ENST00000618819 C12orf74Q32Q52 190 aa11.76□□□□□ -0.53
PTPN9-206ENST00000618819 MRPL51Q4U2R6 128 aaKnown RBP11.76□□□□□ -0.53
PTPN9-206ENST00000618819 IGKV1-27A0A075B6S5 117 aa11.76□□□□□ -0.53
PTPN9-206ENST00000618819 LINC00473A8K010 186 aa11.76□□□□□ -0.53
PTPN9-206ENST00000618819 CLPSP04118 112 aa11.76□□□□□ -0.53
PTPN9-206ENST00000618819 METRNQ9UJH8 293 aa11.76□□□□□ -0.53
PTPN9-206ENST00000618819 RNASE2P10153 161 aaKnown RBP11.76□□□□□ -0.53
PTPN9-206ENST00000618819 FBLN5Q9UBX5 448 aa11.76□□□□□ -0.53
PTPN9-206ENST00000618819 IGHV1-46P01743 117 aa11.76□□□□□ -0.53
PTPN9-206ENST00000618819 HLA-DMBP28068 263 aa11.76□□□□□ -0.53
PTPN9-206ENST00000618819 PTPRFP10586 1907 aa11.76□□□□□ -0.53
PTPN9-206ENST00000618819 TRBV7-1A0A0A6YYK4 115 aa11.76□□□□□ -0.53
PTPN9-206ENST00000618819 J3KT08 172 aa11.76□□□□□ -0.53
PTPN9-206ENST00000618819 BAALC-AS2P0C853 105 aa11.76□□□□□ -0.53
PTPN9-206ENST00000618819 DOCK1Q14185 1865 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 C15orf62A8K5M9 175 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 TRBV25-1A0A075B6N4 114 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 J3QRE1 110 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 SP9P0CG40 484 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 FAM166AQ6J272 317 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 A0A1B0GX51 115 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 BRD3OSQ6XYD6 125 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 SMIM2Q9BVW6 85 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 C14orf132Q9NPU4 83 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 KIAA1217Q5T5P2 1943 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 M0R1W7 72 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 RHPN1-AS1Q9BWJ2 59 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 CGB3P0DN86 165 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 EFNA4P52798 201 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 TRAV13-2A0A0B4J235 113 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 PRSS29PA6NIE9 313 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 RHODO00212 210 aa11.75□□□□□ -0.53
PTPN9-206ENST00000618819 EIF4EBP2Q13542 120 aaPredicted RBP11.75□□□□□ -0.53
PTPN9-206ENST00000618819 PSPNO60542 156 aa11.74□□□□□ -0.53
PTPN9-206ENST00000618819 IGHV1-8P0DP01 117 aa11.74□□□□□ -0.53
PTPN9-206ENST00000618819 SPTSSBQ8NFR3 76 aa11.74□□□□□ -0.53
PTPN9-206ENST00000618819 A0A0G2JRQ6 117 aa11.74□□□□□ -0.53
PTPN9-206ENST00000618819 H0YJW9 148 aa11.74□□□□□ -0.53
PTPN9-206ENST00000618819 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
PTPN9-206ENST00000618819 DKK2Q9UBU2 259 aa11.74□□□□□ -0.53
PTPN9-206ENST00000618819 USP54Q70EL1 1684 aa11.74□□□□□ -0.53
PTPN9-206ENST00000618819 LHBP01229 141 aa11.74□□□□□ -0.53
PTPN9-206ENST00000618819 SPINK13Q1W4C9 94 aa11.74□□□□□ -0.53
PTPN9-206ENST00000618819 ZNF581Q9P0T4 197 aa11.74□□□□□ -0.53
PTPN9-206ENST00000618819 PRSS46E5RG02 174 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 FNDC10F2Z333 226 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 CD177Q8N6Q3 437 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 FAM236AA0A1B0GUQ0 79 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 FAM236BA0A1B0GV22 79 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 SPATA25Q9BR10 227 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 XCL2Q9UBD3 114 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 A0A096LPF7 62 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 CGB7P0DN87 165 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 LYPD1Q8N2G4 141 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 KLHL30-AS1Q8NEE0 82 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 F5H768 121 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 SIGLEC8Q9NYZ4 499 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 F6UB75 175 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 C8orf31Q8N9H6 132 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 DOCK11Q5JSL3 2073 aa11.73□□□□□ -0.53
PTPN9-206ENST00000618819 DEFB131AP59861 70 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 TMEM75Q8N9X5 138 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 SPANXCQ9NY87 97 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 PKD1L3Q7Z443 1732 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 ZNF831Q5JPB2 1677 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.72□□□□□ -0.53
PTPN9-206ENST00000618819 LGALS9BQ3B8N2 356 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 LGALS9CQ6DKI2 356 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 RNF144BQ7Z419 303 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 WIPF2Q8TF74 440 aaPredicted RBP11.72□□□□□ -0.53
PTPN9-206ENST00000618819 TEX48A0A1B0GUV7 120 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 SDHAF1A6NFY7 115 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 C5orf67F2Z3F1 127 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 MST1LQ2TV78 715 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 ZNRF2Q8NHG8 242 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 CDPF1Q6NVV7 123 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 HS3ST6Q96QI5 342 aa11.72□□□□□ -0.53
PTPN9-206ENST00000618819 H3BUX3 64 aa11.71□□□□□ -0.53
PTPN9-206ENST00000618819 CMC4P56277 68 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms