RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 TMEM78Q5T7P6 136 aa11.78□□□□□ -0.52
TNFRSF11A-206ENST00000617039 BEX4Q9NWD9 120 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF11A-206ENST00000617039 A0A1W2PPR1 153 aa11.78□□□□□ -0.52
TNFRSF11A-206ENST00000617039 PRTN3P24158 256 aa11.78□□□□□ -0.52
TNFRSF11A-206ENST00000617039 MRPL32Q9BYC8 188 aaKnown RBP11.78□□□□□ -0.52
TNFRSF11A-206ENST00000617039 IGHV4-61A0A0C4DH41 118 aa11.77□□□□□ -0.52
TNFRSF11A-206ENST00000617039 DLX6P56179 175 aa11.77□□□□□ -0.52
TNFRSF11A-206ENST00000617039 C8orf49Q96NF6 230 aa11.77□□□□□ -0.52
TNFRSF11A-206ENST00000617039 TMEM208Q9BTX3 173 aa11.77□□□□□ -0.52
TNFRSF11A-206ENST00000617039 A0A1B0GWJ7 208 aa11.77□□□□□ -0.53
TNFRSF11A-206ENST00000617039 BLCAPP62952 87 aa11.77□□□□□ -0.53
TNFRSF11A-206ENST00000617039 NUP35Q8NFH5 326 aa11.77□□□□□ -0.53
TNFRSF11A-206ENST00000617039 C8orf46Q8TAG6 207 aa11.77□□□□□ -0.53
TNFRSF11A-206ENST00000617039 PSG8Q9UQ74 426 aa11.77□□□□□ -0.53
TNFRSF11A-206ENST00000617039 A0A1W2PRE2 83 aa11.77□□□□□ -0.53
TNFRSF11A-206ENST00000617039 C20orf202A1L168 122 aa11.77□□□□□ -0.53
TNFRSF11A-206ENST00000617039 CGB3P0DN86 165 aa11.77□□□□□ -0.53
TNFRSF11A-206ENST00000617039 CGB7P0DN87 165 aa11.77□□□□□ -0.53
TNFRSF11A-206ENST00000617039 SFTPCP11686 197 aa11.77□□□□□ -0.53
TNFRSF11A-206ENST00000617039 RPL7P18124 248 aaKnown RBP11.77□□□□□ -0.53
TNFRSF11A-206ENST00000617039 CBY3A6NI87 242 aa11.76□□□□□ -0.53
TNFRSF11A-206ENST00000617039 TCRAP04437 139 aa11.76□□□□□ -0.53
TNFRSF11A-206ENST00000617039 CTAG1AP78358 180 aa11.76□□□□□ -0.53
TNFRSF11A-206ENST00000617039 CENPVQ7Z7K6 275 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF11A-206ENST00000617039 Q8N7P7 452 aa11.76□□□□□ -0.53
TNFRSF11A-206ENST00000617039 PRR20EP86478 221 aa11.76□□□□□ -0.53
TNFRSF11A-206ENST00000617039 PRR20CP86479 221 aa11.76□□□□□ -0.53
TNFRSF11A-206ENST00000617039 PRR20DP86480 221 aa11.76□□□□□ -0.53
TNFRSF11A-206ENST00000617039 PRR20BP86481 221 aa11.76□□□□□ -0.53
TNFRSF11A-206ENST00000617039 PRR20AP86496 221 aa11.76□□□□□ -0.53
TNFRSF11A-206ENST00000617039 NRN1Q9NPD7 142 aa11.76□□□□□ -0.53
TNFRSF11A-206ENST00000617039 CDC42EP3Q9UKI2 254 aa11.76□□□□□ -0.53
TNFRSF11A-206ENST00000617039 LEPROTL1O95214 131 aa11.75□□□□□ -0.53
TNFRSF11A-206ENST00000617039 IGHV4-38-2P0DP08 117 aa11.75□□□□□ -0.53
TNFRSF11A-206ENST00000617039 NMUP48645 174 aa11.75□□□□□ -0.53
TNFRSF11A-206ENST00000617039 TMEM183BQ1AE95 376 aa11.75□□□□□ -0.53
TNFRSF11A-206ENST00000617039 SPATA45Q537H7 98 aa11.75□□□□□ -0.53
TNFRSF11A-206ENST00000617039 TMEM136Q6ZRR5 245 aa11.75□□□□□ -0.53
TNFRSF11A-206ENST00000617039 NPFFO15130 113 aa11.75□□□□□ -0.53
TNFRSF11A-206ENST00000617039 FCN3O75636 299 aa11.75□□□□□ -0.53
TNFRSF11A-206ENST00000617039 IGHV2-70P01814 119 aa11.75□□□□□ -0.53
TNFRSF11A-206ENST00000617039 SLAQ13239 276 aa11.75□□□□□ -0.53
TNFRSF11A-206ENST00000617039 TCAPO15273 167 aa11.75□□□□□ -0.53
TNFRSF11A-206ENST00000617039 HLA-DQA1P01909 254 aa11.75□□□□□ -0.53
TNFRSF11A-206ENST00000617039 RPP21Q9H633 154 aaKnown RBP11.75□□□□□ -0.53
TNFRSF11A-206ENST00000617039 TDRG1Q3Y452 100 aa11.74□□□□□ -0.53
TNFRSF11A-206ENST00000617039 RCHY1Q96PM5 261 aa11.74□□□□□ -0.53
TNFRSF11A-206ENST00000617039 IGHV4-30-2A0A087WSY4 118 aa11.74□□□□□ -0.53
TNFRSF11A-206ENST00000617039 GPX1P07203 203 aa11.74□□□□□ -0.53
TNFRSF11A-206ENST00000617039 HBBP68871 147 aa11.74□□□□□ -0.53
TNFRSF11A-206ENST00000617039 LDLRAD2Q5SZI1 272 aa11.74□□□□□ -0.53
TNFRSF11A-206ENST00000617039 F6UB75 175 aa11.74□□□□□ -0.53
TNFRSF11A-206ENST00000617039 ZNF25P17030 456 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF11A-206ENST00000617039 PKIAP61925 76 aa11.74□□□□□ -0.53
TNFRSF11A-206ENST00000617039 RIGQ13278 110 aa11.74□□□□□ -0.53
TNFRSF11A-206ENST00000617039 LINC00477Q96M19 166 aa11.74□□□□□ -0.53
TNFRSF11A-206ENST00000617039 TXNDC17Q9BRA2 123 aa11.74□□□□□ -0.53
TNFRSF11A-206ENST00000617039 APOHP02749 345 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF11A-206ENST00000617039 ARMS2P0C7Q2 107 aa11.73□□□□□ -0.53
TNFRSF11A-206ENST00000617039 VAMP3Q15836 100 aa11.73□□□□□ -0.53
TNFRSF11A-206ENST00000617039 COL5A1P20908 1838 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF11A-206ENST00000617039 A0A1B0GW64 132 aa11.73□□□□□ -0.53
TNFRSF11A-206ENST00000617039 TMEM213A2RRL7 107 aa11.73□□□□□ -0.53
TNFRSF11A-206ENST00000617039 P0C879 139 aa11.73□□□□□ -0.53
TNFRSF11A-206ENST00000617039 FAM90A9PA6NNJ1 464 aa11.73□□□□□ -0.53
TNFRSF11A-206ENST00000617039 ZNF688P0C7X2 276 aa11.73□□□□□ -0.53
TNFRSF11A-206ENST00000617039 IGLC1P0CG04 106 aa11.73□□□□□ -0.53
TNFRSF11A-206ENST00000617039 OVOL3O00110 214 aa11.72□□□□□ -0.53
TNFRSF11A-206ENST00000617039 RNASE4P34096 147 aaKnown RBP11.72□□□□□ -0.53
TNFRSF11A-206ENST00000617039 C19orf24Q9BVV8 132 aa11.72□□□□□ -0.53
TNFRSF11A-206ENST00000617039 MAST4O15021 2626 aa11.72□□□□□ -0.53
TNFRSF11A-206ENST00000617039 IGKV1-17P01599 117 aa11.72□□□□□ -0.53
TNFRSF11A-206ENST00000617039 RNF151Q2KHN1 245 aa11.72□□□□□ -0.53
TNFRSF11A-206ENST00000617039 MAJINQ3KP22 176 aa11.72□□□□□ -0.53
TNFRSF11A-206ENST00000617039 ZNF664Q8N3J9 261 aa11.72□□□□□ -0.53
TNFRSF11A-206ENST00000617039 ZNF503Q96F45 646 aa11.72□□□□□ -0.53
TNFRSF11A-206ENST00000617039 FBLL1A6NHQ2 334 aaKnown RBP11.71□□□□□ -0.53
TNFRSF11A-206ENST00000617039 IGHV4-39P01824 125 aa11.71□□□□□ -0.53
TNFRSF11A-206ENST00000617039 EEF1AKMT3Q96AZ1 226 aa11.71□□□□□ -0.53
TNFRSF11A-206ENST00000617039 A0A1B0GUT8 65 aa11.71□□□□□ -0.53
TNFRSF11A-206ENST00000617039 SMIM17P0DL12 118 aa11.71□□□□□ -0.53
TNFRSF11A-206ENST00000617039 TMEM30BQ3MIR4 351 aa11.71□□□□□ -0.53
TNFRSF11A-206ENST00000617039 TRAV41A0A0B4J266 112 aa11.71□□□□□ -0.54
TNFRSF11A-206ENST00000617039 IGLV2-23P01705 113 aa11.71□□□□□ -0.54
TNFRSF11A-206ENST00000617039 AMN1Q8IY45 258 aa11.71□□□□□ -0.54
TNFRSF11A-206ENST00000617039 FXYD5Q96DB9 178 aa11.71□□□□□ -0.54
TNFRSF11A-206ENST00000617039 OR4C46A6NHA9 309 aa11.7□□□□□ -0.54
TNFRSF11A-206ENST00000617039 IGHV2-5P01817 119 aa11.7□□□□□ -0.54
TNFRSF11A-206ENST00000617039 IGLV1-47P01700 117 aa11.7□□□□□ -0.54
TNFRSF11A-206ENST00000617039 FOLR2P14207 255 aa11.7□□□□□ -0.54
TNFRSF11A-206ENST00000617039 VGLL1Q99990 258 aa11.7□□□□□ -0.54
TNFRSF11A-206ENST00000617039 NAA38Q9BRA0 125 aaKnown RBP11.7□□□□□ -0.54
TNFRSF11A-206ENST00000617039 CD99P14209 185 aa11.7□□□□□ -0.54
TNFRSF11A-206ENST00000617039 LYZL1Q6UWQ5 148 aa11.7□□□□□ -0.54
TNFRSF11A-206ENST00000617039 ZNF562Q6V9R5 426 aa11.7□□□□□ -0.54
TNFRSF11A-206ENST00000617039 ITLN2Q8WWU7 325 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF11A-206ENST00000617039 RAB37Q96AX2 223 aa11.7□□□□□ -0.54
TNFRSF11A-206ENST00000617039 GRAMD2BQ96HH9 432 aa11.7□□□□□ -0.54
TNFRSF11A-206ENST00000617039 V9GYV3 84 aa11.7□□□□□ -0.54
TNFRSF11A-206ENST00000617039 IZUMO1RA6ND01 250 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms