RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CYP2G1PQ6ZSU1 146 aa16.07■□□□□ 0.16
MMP28-203ENST00000612672 TMPRSS5Q9H3S3 457 aa16.07■□□□□ 0.16
MMP28-203ENST00000612672 SCP2D1Q9UJQ7 156 aa16.07■□□□□ 0.16
MMP28-203ENST00000612672 HIGD1AQ9Y241 93 aa16.07■□□□□ 0.16
MMP28-203ENST00000612672 SNRPCP09234 159 aaKnown RBP16.06■□□□□ 0.16
MMP28-203ENST00000612672 GFI1BQ5VTD9 330 aa16.06■□□□□ 0.16
MMP28-203ENST00000612672 RPUSD4Q96CM3 377 aaKnown RBP16.06■□□□□ 0.16
MMP28-203ENST00000612672 VSIG2Q96IQ7 327 aa16.06■□□□□ 0.16
MMP28-203ENST00000612672 MCUBQ9NWR8 336 aa16.06■□□□□ 0.16
MMP28-203ENST00000612672 PPP1R14DQ9NXH3 145 aa16.06■□□□□ 0.16
MMP28-203ENST00000612672 TNFRSF18Q9Y5U5 241 aa16.06■□□□□ 0.16
MMP28-203ENST00000612672 A0A096LPF7 62 aa16.05■□□□□ 0.16
MMP28-203ENST00000612672 DUXBA0A1W2PPF3 345 aa16.05■□□□□ 0.16
MMP28-203ENST00000612672 PRAC2D3DTV9 90 aa16.05■□□□□ 0.16
MMP28-203ENST00000612672 H7BYZ3 331 aa16.05■□□□□ 0.16
MMP28-203ENST00000612672 SYNGR2O43760 224 aa16.05■□□□□ 0.16
MMP28-203ENST00000612672 ANXA3P12429 323 aa16.05■□□□□ 0.16
MMP28-203ENST00000612672 RPL7P18124 248 aaKnown RBP16.05■□□□□ 0.16
MMP28-203ENST00000612672 KRTAP10-1P60331 282 aa16.05■□□□□ 0.16
MMP28-203ENST00000612672 SPANXN5Q5MJ07 72 aa16.05■□□□□ 0.16
MMP28-203ENST00000612672 PATE2Q6UY27 113 aa16.05■□□□□ 0.16
MMP28-203ENST00000612672 DIRAS2Q96HU8 199 aa16.04■□□□□ 0.16
MMP28-203ENST00000612672 CCNKO75909 580 aa16.03■□□□□ 0.16
MMP28-203ENST00000612672 LINC00869P0C866 280 aa16.03■□□□□ 0.16
MMP28-203ENST00000612672 DNAH10OSP0CZ25 163 aa16.03■□□□□ 0.16
MMP28-203ENST00000612672 SLC25A6P12236 298 aa16.03■□□□□ 0.16
MMP28-203ENST00000612672 PLP1P60201 277 aa16.03■□□□□ 0.16
MMP28-203ENST00000612672 Q6ZTI0 123 aa16.03■□□□□ 0.16
MMP28-203ENST00000612672 TMED4Q7Z7H5 227 aa16.03■□□□□ 0.16
MMP28-203ENST00000612672 LRTM2Q8N967 370 aa16.03■□□□□ 0.16
MMP28-203ENST00000612672 SCGB3A2Q96PL1 93 aa16.03■□□□□ 0.16
MMP28-203ENST00000612672 PMS2P5A8MQ11 134 aa16.02■□□□□ 0.16
MMP28-203ENST00000612672 H3BNG1 76 aa16.02■□□□□ 0.16
MMP28-203ENST00000612672 HYPMO75409 117 aa16.02■□□□□ 0.16
MMP28-203ENST00000612672 IL5P05113 134 aa16.02■□□□□ 0.16
MMP28-203ENST00000612672 RAP2BP61225 183 aa16.02■□□□□ 0.16
MMP28-203ENST00000612672 ZBTB8BQ8NAP8 495 aaPredicted RBP16.02■□□□□ 0.16
MMP28-203ENST00000612672 CIB3Q96Q77 187 aaPredicted RBP16.02■□□□□ 0.16
MMP28-203ENST00000612672 LINC00854A0A1B0GVQ3 168 aa16.01■□□□□ 0.15
MMP28-203ENST00000612672 SMCO3A2RU48 225 aa16.01■□□□□ 0.15
MMP28-203ENST00000612672 SLC17A3O00476 420 aa16.01■□□□□ 0.15
MMP28-203ENST00000612672 MED6O75586 246 aa16.01■□□□□ 0.15
MMP28-203ENST00000612672 RLN2P04090 185 aa16.01■□□□□ 0.15
MMP28-203ENST00000612672 OR5G3P0C626 314 aa16.01■□□□□ 0.15
MMP28-203ENST00000612672 ZNF331Q9NQX6 463 aaPredicted RBP16.01■□□□□ 0.15
MMP28-203ENST00000612672 H3BTX0 84 aa16■□□□□ 0.15
MMP28-203ENST00000612672 J3KRW8 73 aa16■□□□□ 0.15
MMP28-203ENST00000612672 C20orf144Q9BQM9 153 aa16■□□□□ 0.15
MMP28-203ENST00000612672 PGPEP1Q9NXJ5 209 aa16■□□□□ 0.15
MMP28-203ENST00000612672 MDFICQ9P1T7 246 aa16■□□□□ 0.15
MMP28-203ENST00000612672 RABL2BQ9UNT1 228 aa16■□□□□ 0.15
MMP28-203ENST00000612672 HOXB5P09067 269 aa15.99■□□□□ 0.15
MMP28-203ENST00000612672 TMEM128Q5BJH2 165 aa15.99■□□□□ 0.15
MMP28-203ENST00000612672 LRRC20Q8TCA0 184 aa15.99■□□□□ 0.15
MMP28-203ENST00000612672 STRAPQ9Y3F4 350 aaKnown RBP15.99■□□□□ 0.15
MMP28-203ENST00000612672 ADAP1O75689 374 aa15.98■□□□□ 0.15
MMP28-203ENST00000612672 SMR3BP02814 79 aaPredicted RBP15.98■□□□□ 0.15
MMP28-203ENST00000612672 VAMP1P23763 118 aa15.98■□□□□ 0.15
MMP28-203ENST00000612672 S100A7P31151 101 aa15.98■□□□□ 0.15
MMP28-203ENST00000612672 RPP30P78346 268 aaKnown RBP15.98■□□□□ 0.15
MMP28-203ENST00000612672 HAMPP81172 84 aa15.98■□□□□ 0.15
MMP28-203ENST00000612672 SOSTQ9BQB4 213 aa15.98■□□□□ 0.15
MMP28-203ENST00000612672 ARL6Q9H0F7 186 aa15.98■□□□□ 0.15
MMP28-203ENST00000612672 SNURFLB1AK76 121 aa15.97■□□□□ 0.15
MMP28-203ENST00000612672 SIVA1O15304 175 aa15.97■□□□□ 0.15
MMP28-203ENST00000612672 RRAS2P62070 204 aaPredicted RBP15.97■□□□□ 0.15
MMP28-203ENST00000612672 PPP1R1AQ13522 171 aa15.97■□□□□ 0.15
MMP28-203ENST00000612672 MORN5Q5VZ52 161 aa15.97■□□□□ 0.15
MMP28-203ENST00000612672 CCDC190Q86UF4 302 aa15.97■□□□□ 0.15
MMP28-203ENST00000612672 CCDC28AQ8IWP9 274 aa15.97■□□□□ 0.15
MMP28-203ENST00000612672 ARV1Q9H2C2 271 aa15.97■□□□□ 0.15
MMP28-203ENST00000612672 TRAV12-3A0A0B4J271 114 aa15.96■□□□□ 0.15
MMP28-203ENST00000612672 NXPH4O95158 308 aa15.96■□□□□ 0.15
MMP28-203ENST00000612672 CT45A10P0DMU9 189 aa15.96■□□□□ 0.15
MMP28-203ENST00000612672 ERVFC1-1P60608 527 aa15.96■□□□□ 0.15
MMP28-203ENST00000612672 POLR2GP62487 172 aaKnown RBP eCLIP15.96■□□□□ 0.15
MMP28-203ENST00000612672 SLC38A11Q08AI6 406 aa15.96■□□□□ 0.15
MMP28-203ENST00000612672 FRZBQ92765 325 aa15.96■□□□□ 0.15
MMP28-203ENST00000612672 HMCN2Q8NDA2 5059 aa15.95■□□□□ 0.14
MMP28-203ENST00000612672 SFT2D2O95562 160 aa15.95■□□□□ 0.14
MMP28-203ENST00000612672 DAZ2Q13117 558 aaKnown RBP15.95■□□□□ 0.14
MMP28-203ENST00000612672 CDPF1Q6NVV7 123 aa15.95■□□□□ 0.14
MMP28-203ENST00000612672 LCN15Q6UWW0 184 aa15.95■□□□□ 0.14
MMP28-203ENST00000612672 DYNC2LI1Q8TCX1 351 aa15.95■□□□□ 0.14
MMP28-203ENST00000612672 TRIM63Q969Q1 353 aa15.95■□□□□ 0.14
MMP28-203ENST00000612672 A0A087WTM6 91 aa15.94■□□□□ 0.14
MMP28-203ENST00000612672 CXCL2P19875 107 aa15.94■□□□□ 0.14
MMP28-203ENST00000612672 ID3Q02535 119 aa15.94■□□□□ 0.14
MMP28-203ENST00000612672 C11orf72Q8NBR9 251 aa15.94■□□□□ 0.14
MMP28-203ENST00000612672 ANXA7P20073 488 aaKnown RBP15.93■□□□□ 0.14
MMP28-203ENST00000612672 SELENOTP62341 195 aa15.93■□□□□ 0.14
MMP28-203ENST00000612672 ZNF431Q8TF32 576 aaPredicted RBP15.93■□□□□ 0.14
MMP28-203ENST00000612672 SLC50A1Q9BRV3 221 aa15.93■□□□□ 0.14
MMP28-203ENST00000612672 GSN-AS1Q9NRJ2 163 aa15.93■□□□□ 0.14
MMP28-203ENST00000612672 PSENENQ9NZ42 101 aa15.93■□□□□ 0.14
MMP28-203ENST00000612672 RABL2AQ9UBK7 228 aaPredicted RBP15.93■□□□□ 0.14
MMP28-203ENST00000612672 LRP1Q07954 4544 aaKnown RBP15.93■□□□□ 0.14
MMP28-203ENST00000612672 K7EPK0 472 aa15.92■□□□□ 0.14
MMP28-203ENST00000612672 TEPPQ6URK8 271 aa15.92■□□□□ 0.14
MMP28-203ENST00000612672 LINC00305Q7Z4B0 112 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms