RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 IGKV4-1P06312 121 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 DEFA4P12838 97 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 CBR1P16152 277 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 CSRP1P21291 193 aaKnown RBP2.67□□□□□ -1.98
LINC00458-206ENST00000607494 PIGPP57054 158 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 GNG5P63218 68 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 LCA10Q71F78 164 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 BPIFA4PQ86YQ2 179 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 DNAJC9Q8WXX5 260 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 DNAJC30Q96LL9 226 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 SCGB3A1Q96QR1 104 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 SH3BGRL3Q9H299 93 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 LYRM2Q9NU23 88 aaPredicted RBP2.67□□□□□ -1.98
LINC00458-206ENST00000607494 GINS2Q9Y248 185 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 ERGIC3Q9Y282 383 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 FRYQ5TBA9 3013 aa2.67□□□□□ -1.98
LINC00458-206ENST00000607494 SDK1Q7Z5N4 2213 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 GCN1Q92616 2671 aaKnown RBP2.66□□□□□ -1.98
LINC00458-206ENST00000607494 GREB1Q4ZG55 1949 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 FLNBO75369 2602 aaKnown RBP2.66□□□□□ -1.98
LINC00458-206ENST00000607494 COL4A2P08572 1712 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 PPP5D1E7EU14 171 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 NDUFC2O95298 119 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 IFNA7P01567 189 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 IFI30P13284 250 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 S100A4P26447 101 aaKnown RBP2.66□□□□□ -1.98
LINC00458-206ENST00000607494 SERPINB1P30740 379 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 PHBP35232 272 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 FUSP35637 526 aaKnown RBP eCLIP2.66□□□□□ -1.98
LINC00458-206ENST00000607494 SUPT4H1P63272 117 aaKnown RBP2.66□□□□□ -1.98
LINC00458-206ENST00000607494 TSNQ15631 228 aaKnown RBP2.66□□□□□ -1.98
LINC00458-206ENST00000607494 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 LYRM7Q5U5X0 104 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 BRD3OSQ6XYD6 125 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 MIR17HGQ75NE6 70 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.66□□□□□ -1.98
LINC00458-206ENST00000607494 OR4X2Q8NGF9 303 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 MRPL40Q9NQ50 206 aaKnown RBP2.66□□□□□ -1.98
LINC00458-206ENST00000607494 MED29Q9NX70 200 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 PRO2289Q9P1D8 64 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 SMPXQ9UHP9 88 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 ZZEF1O43149 2961 aa2.66□□□□□ -1.98
LINC00458-206ENST00000607494 AKAP13Q12802 2813 aa2.65□□□□□ -1.98
LINC00458-206ENST00000607494 F5P12259 2224 aa2.65□□□□□ -1.98
LINC00458-206ENST00000607494 TRBV10-2A0A0K0K1G8 114 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 RFPL4AA6NLU0 287 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 RFPL4AL1F8VTS6 287 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 H0YJX3 145 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 C3orf84H3BNL1 204 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 H7C1C5 153 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 MFSD11O43934 449 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 RPSAP08865 295 aaKnown RBP2.65□□□□□ -1.99
LINC00458-206ENST00000607494 SRIP30626 198 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 EIF2B2P49770 351 aaKnown RBP2.65□□□□□ -1.99
LINC00458-206ENST00000607494 LCN6P62502 163 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 ERHP84090 104 aaKnown RBP2.65□□□□□ -1.99
LINC00458-206ENST00000607494 FAM27BQ5VT28 67 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 SMIM15Q7Z3B0 74 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 GRINAQ7Z429 371 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 TRAPPC6BQ86SZ2 158 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 CLVS1Q8IUQ0 354 aaPredicted RBP2.65□□□□□ -1.99
LINC00458-206ENST00000607494 PFN4Q8NHR9 129 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 C11orf40Q8WZ69 217 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 IMUPQ9GZP8 106 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 AMMECR1Q9Y4X0 333 aaPredicted RBP2.65□□□□□ -1.99
LINC00458-206ENST00000607494 SPAG17Q6Q759 2223 aa2.65□□□□□ -1.99
LINC00458-206ENST00000607494 MYH9P35579 1960 aaKnown RBP2.65□□□□□ -1.99
LINC00458-206ENST00000607494 MAST4O15021 2626 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 EML5Q05BV3 1969 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 TMSB15BA0A087X1C1 80 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 A0A1B0GV72 72 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 C19orf84I3L1E1 186 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 AIPO00170 330 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 IDO1P14902 403 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 FXYD2P54710 66 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 TMEM258P61165 79 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 YPEL3P61236 119 aaPredicted RBP2.64□□□□□ -1.99
LINC00458-206ENST00000607494 RHEBQ15382 184 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 ZNF791Q3KP31 576 aaPredicted RBP2.64□□□□□ -1.99
LINC00458-206ENST00000607494 LINC01554Q52M75 96 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 HIST3H2BBQ8N257 126 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 STX19Q8N4C7 294 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 OR52R1Q8NGF1 315 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 ACER3Q9NUN7 267 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 SSR3Q9UNL2 185 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 IGSF10Q6WRI0 2623 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 HELZ2Q9BYK8 2649 aaKnown RBP2.64□□□□□ -1.99
LINC00458-206ENST00000607494 ITPR1Q14643 2758 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 ASH1LQ9NR48 2969 aaKnown RBP2.64□□□□□ -1.99
LINC00458-206ENST00000607494 SPEGQ15772 3267 aa2.64□□□□□ -1.99
LINC00458-206ENST00000607494 DSPP15924 2871 aaKnown RBP2.63□□□□□ -1.99
LINC00458-206ENST00000607494 PLXNB1O43157 2135 aa2.63□□□□□ -1.99
LINC00458-206ENST00000607494 PDCD11Q14690 1871 aaKnown RBP2.63□□□□□ -1.99
LINC00458-206ENST00000607494 KTN1-AS1Q86SY8 53 aa2.63□□□□□ -1.99
LINC00458-206ENST00000607494 TMEM106AQ96A25 262 aa2.63□□□□□ -1.99
LINC00458-206ENST00000607494 GINS4Q9BRT9 223 aa2.63□□□□□ -1.99
LINC00458-206ENST00000607494 PBDC1Q9BVG4 233 aa2.63□□□□□ -1.99
LINC00458-206ENST00000607494 NAV2Q8IVL1 2488 aa2.63□□□□□ -1.99
LINC00458-206ENST00000607494 CACNA1EQ15878 2313 aa2.63□□□□□ -1.99
LINC00458-206ENST00000607494 ASCC3Q8N3C0 2202 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms