RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 UQCC3Q6UW78 93 aa5.64□□□□□ -1.51
SMAD4-210ENST00000590061 TOMM20LQ6UXN7 152 aa5.64□□□□□ -1.51
SMAD4-210ENST00000590061 LINC00305Q7Z4B0 112 aa5.64□□□□□ -1.51
SMAD4-210ENST00000590061 OR8I2Q8N0Y5 310 aa5.64□□□□□ -1.51
SMAD4-210ENST00000590061 LYPD1Q8N2G4 141 aa5.64□□□□□ -1.51
SMAD4-210ENST00000590061 KLHL30-AS1Q8NEE0 82 aa5.64□□□□□ -1.51
SMAD4-210ENST00000590061 RAB24Q969Q5 203 aa5.64□□□□□ -1.51
SMAD4-210ENST00000590061 RPUSD4Q96CM3 377 aaKnown RBP5.64□□□□□ -1.51
SMAD4-210ENST00000590061 SHANK2-AS3Q9BTD1 123 aa5.64□□□□□ -1.51
SMAD4-210ENST00000590061 MAP1LC3BQ9GZQ8 125 aa5.64□□□□□ -1.51
SMAD4-210ENST00000590061 SH3BGRL3Q9H299 93 aa5.64□□□□□ -1.51
SMAD4-210ENST00000590061 ZMAT4Q9H898 229 aa5.64□□□□□ -1.51
SMAD4-210ENST00000590061 SVEP1Q4LDE5 3571 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 IGHV3-21A0A0B4J1V1 117 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 FBLL1A6NHQ2 334 aaKnown RBP5.63□□□□□ -1.51
SMAD4-210ENST00000590061 A8MWP6 167 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 I3L521 148 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 ZNF253O75346 499 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 IGHV3-48P01763 117 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 STAG3L2P0CL84 134 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 CRYBB3P26998 211 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 PSG9Q00887 426 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 KIAA0141Q14154 515 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-210ENST00000590061 FAM122CQ6P4D5 195 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 RPP25LQ8N5L8 163 aaKnown RBP5.63□□□□□ -1.51
SMAD4-210ENST00000590061 LYPD6BQ8NI32 183 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 UHRF2Q96PU4 802 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 MCRIP2Q9BUT9 160 aaKnown RBP5.63□□□□□ -1.51
SMAD4-210ENST00000590061 C20orf24Q9BUV8 137 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 SLC25A39Q9BZJ4 359 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-210ENST00000590061 SIGLEC8Q9NYZ4 499 aa5.63□□□□□ -1.51
SMAD4-210ENST00000590061 A0A1W2PRE2 83 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 ZNF98A6NK75 572 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 K7EQM0 130 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 CCL24O00175 119 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 PDE6DO43924 150 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 OR7C2O60412 319 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 IGHV3-11P01762 117 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 NMBP08949 121 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 HIST1H1EP10412 219 aaKnown RBP5.62□□□□□ -1.51
SMAD4-210ENST00000590061 INSL3P51460 131 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 CEBPGP53567 150 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 KLF5Q13887 457 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-210ENST00000590061 C3orf56Q8N813 242 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 NUDT10Q8NFP7 164 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 OR2K2Q8NGT1 345 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 RXFP4Q8TDU9 374 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 NUDT11Q96G61 164 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 CHRDL1Q9BU40 450 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 PAXXQ9BUH6 204 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 OR51M1Q9H341 326 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 AAMDCQ9H7C9 122 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 MRPL36Q9P0J6 103 aaKnown RBP5.62□□□□□ -1.51
SMAD4-210ENST00000590061 VAX2Q9UIW0 290 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 ANK3Q12955 4377 aaKnown RBP5.62□□□□□ -1.51
SMAD4-210ENST00000590061 WNK1Q9H4A3 2382 aa5.62□□□□□ -1.51
SMAD4-210ENST00000590061 COL6A5A8TX70 2615 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 TRAV2A0A0B4J234 112 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 TRAV25A0A0B4J276 109 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 IGHV7-4-1A0A0J9YVY3 117 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 LINC00862A6NCI5 91 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 H3BRN7 92 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 BUB3O43684 328 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 GATCO43716 136 aaKnown RBP5.61□□□□□ -1.51
SMAD4-210ENST00000590061 IGHV3-23P01764 117 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 RAB4AP20338 218 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 GCHFRP30047 84 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 HOXD3P31249 432 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-210ENST00000590061 ID1P41134 155 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 CSN1S1P47710 185 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 UBE2L3P68036 154 aaKnown RBP5.61□□□□□ -1.51
SMAD4-210ENST00000590061 IFITM2Q01629 132 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 AWAT1Q58HT5 328 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 LCN15Q6UWW0 184 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 C12orf54Q6X4T0 127 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 RBPMS2Q6ZRY4 209 aaKnown RBP5.61□□□□□ -1.51
SMAD4-210ENST00000590061 C19orf35Q6ZS72 473 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 EIF4E3Q8N5X7 224 aaKnown RBP5.61□□□□□ -1.51
SMAD4-210ENST00000590061 OR11H1Q8NG94 326 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 OR9G4Q8NGQ1 327 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 TMEM37Q8WXS4 190 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 C8orf49Q96NF6 230 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 SLC50A1Q9BRV3 221 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 ZNF747Q9BV97 191 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 HRH4Q9H3N8 390 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 SMPXQ9UHP9 88 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 FBN3Q75N90 2809 aa5.61□□□□□ -1.51
SMAD4-210ENST00000590061 A0A087X0K7 114 aa5.6□□□□□ -1.51
SMAD4-210ENST00000590061 ZNF785A8K8V0 405 aa5.6□□□□□ -1.51
SMAD4-210ENST00000590061 PPP5D1E7EU14 171 aa5.6□□□□□ -1.51
SMAD4-210ENST00000590061 NBEAP1P0C6P0 100 aa5.6□□□□□ -1.51
SMAD4-210ENST00000590061 ARL14EPLP0DKL9 152 aa5.6□□□□□ -1.51
SMAD4-210ENST00000590061 CD28P10747 220 aa5.6□□□□□ -1.51
SMAD4-210ENST00000590061 GATA2P23769 480 aaPredicted RBP5.6□□□□□ -1.51
SMAD4-210ENST00000590061 FHL3Q13643 280 aa5.6□□□□□ -1.51
SMAD4-210ENST00000590061 FAM74A3Q4VXF1 159 aa5.6□□□□□ -1.51
SMAD4-210ENST00000590061 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.6□□□□□ -1.51
SMAD4-210ENST00000590061 CMTM2Q8TAZ6 248 aa5.6□□□□□ -1.51
SMAD4-210ENST00000590061 HIST1H2BAQ96A08 127 aa5.6□□□□□ -1.51
SMAD4-210ENST00000590061 MRPL53Q96EL3 112 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms