RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 SNRPD3P62318 126 aaKnown RBP5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 LPCAT3Q6P1A2 487 aa5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 Q8N9P0 234 aaPredicted RBP5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 OR4B1Q8NGF8 309 aa5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 OR4C16Q8NGL9 310 aa5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 TERB2Q8NHR7 220 aa5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 RRNAD1Q96FB5 475 aaKnown RBP5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 FUNDC2Q9BWH2 189 aa5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 DOK5Q9P104 306 aa5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 COMMD3Q9UBI1 195 aa5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 LINC00854A0A1B0GVQ3 168 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 LYRM9A8MSI8 78 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 CCNKO75909 580 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 GABARAPO95166 117 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 IGLV2-8P01709 118 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 HBE1P02100 147 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 PGAM2P15259 253 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 AP2S1P53680 142 aaPredicted RBP5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 RPL37AP61513 92 aaKnown RBP5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 TSPAN5P62079 268 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 KLF9Q13886 244 aaPredicted RBP5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 RRN3P1Q2M238 152 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 RNASE10Q5GAN6 216 aaKnown RBP5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 C1orf194Q5T5A4 169 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 GPR107Q5VW38 600 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 MORN5Q5VZ52 161 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 TMEM268Q5VZI3 342 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 LYZL2Q7Z4W2 148 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 TMEM229BQ8NBD8 167 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 Q8WTZ3 238 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 LINC00052Q96N35 136 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 TRGV9Q99603 122 aa5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SLC25A39Q9BZJ4 359 aaPredicted RBP5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.08□□□□□ -1.6
CDK5RAP3-221ENST00000581662 ZNF98A6NK75 572 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 ZNF701M0R085 212 aaPredicted RBP5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SLC17A3O00476 420 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SIVA1O15304 175 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 TNFAIP8O95379 198 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 DEFB130BP0DP73 79 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 DEFB130AP0DP74 79 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 TBPP20226 339 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 S100A5P33763 92 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 LYZP61626 148 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 NUTF2P61970 127 aaKnown RBP5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 OR2F1Q13607 317 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 TRIM16LQ309B1 348 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 PATE2Q6UY27 113 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 CROCCP3Q8IVE0 287 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 Q8N814 137 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 C11orf72Q8NBR9 251 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 CIRBP-AS1Q8TBR5 109 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SMIM4Q8WVI0 70 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SOSTQ9BQB4 213 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 CHAC1Q9BUX1 264 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 PBDC1Q9BVG4 233 aa5.07□□□□□ -1.6
CDK5RAP3-221ENST00000581662 A0A096LPF7 62 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 PRAC2D3DTV9 90 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 H0YIZ8 118 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 BOLA2-SMG1P6H3BVE0 249 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 ATP5G1P05496 136 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 IGKV2-30P06310 120 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 CXCL3P19876 107 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 ATP5G3P48201 142 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SUB1P53999 127 aaKnown RBP eCLIP5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SPATA31B1PQ5VZV4 182 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 STEAP1BQ6NZ63 245 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 Q6ZQT7 251 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SVIPQ8NHG7 77 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SUN5Q8TC36 379 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 DTD1Q8TEA8 209 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 TRIM63Q969Q1 353 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 HEYLQ9NQ87 328 aaPredicted RBP5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 EXTL2Q9UBQ6 330 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 GOLT1BQ9Y3E0 138 aa5.06□□□□□ -1.6
CDK5RAP3-221ENST00000581662 TRAV26-1A0A087WT03 109 aa5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 A0A087X0K7 114 aa5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 CBY3A6NI87 242 aa5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 CEBPZOSA8MTT3 80 aa5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 GABARAPH6UMI1 98 aa5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 CTDSP2O14595 271 aa5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 GSTZ1O43708 216 aaPredicted RBP5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 RAB3DO95716 219 aa5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 INSP01308 110 aa5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SPCS2Q15005 226 aa5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SURF2Q15527 256 aaPredicted RBP5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 OR51S1Q8NGJ8 323 aa5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 RXFP4Q8TDU9 374 aa5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 COPZ2Q9P299 210 aa5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 PRELID1Q9Y255 219 aa5.05□□□□□ -1.6
CDK5RAP3-221ENST00000581662 A0A0B4J2A0 478 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 ANKRD20A5PA0PJZ0 165 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 B3GALNT1O75752 331 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SULT1A3P0DMM9 295 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SULT1A4P0DMN0 295 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 IAPPP10997 89 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 GPX4P36969 197 aaPredicted RBP5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 TAS2R19P59542 299 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 PLP1P60201 277 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SMCO1Q147U7 214 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms