RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PSENENQ9NZ42 101 aa12.53□□□□□ -0.4
MKS1-209ENST00000580127 PKD1P98161 4303 aa12.53□□□□□ -0.4
MKS1-209ENST00000580127 A0A087X0K7 114 aa12.52□□□□□ -0.41
MKS1-209ENST00000580127 H3BP45 60 aa12.52□□□□□ -0.41
MKS1-209ENST00000580127 UBE2MP61081 183 aaKnown RBP12.52□□□□□ -0.41
MKS1-209ENST00000580127 PXDC1Q5TGL8 231 aa12.52□□□□□ -0.41
MKS1-209ENST00000580127 TMEM263Q8WUH6 116 aaKnown RBP12.52□□□□□ -0.41
MKS1-209ENST00000580127 RPUSD4Q96CM3 377 aaKnown RBP12.52□□□□□ -0.41
MKS1-209ENST00000580127 ZNF503Q96F45 646 aa12.52□□□□□ -0.41
MKS1-209ENST00000580127 NPVFQ9HCQ7 196 aa12.52□□□□□ -0.41
MKS1-209ENST00000580127 NOP10Q9NPE3 64 aaKnown RBP12.52□□□□□ -0.41
MKS1-209ENST00000580127 PLAC8L1A1L4L8 177 aa12.51□□□□□ -0.41
MKS1-209ENST00000580127 ID3Q02535 119 aa12.51□□□□□ -0.41
MKS1-209ENST00000580127 PPP1R1AQ13522 171 aa12.51□□□□□ -0.41
MKS1-209ENST00000580127 RNF141Q8WVD5 230 aa12.51□□□□□ -0.41
MKS1-209ENST00000580127 ARL6Q9H0F7 186 aa12.51□□□□□ -0.41
MKS1-209ENST00000580127 GOSR2O14653 212 aa12.5□□□□□ -0.41
MKS1-209ENST00000580127 CXCL2P19875 107 aa12.5□□□□□ -0.41
MKS1-209ENST00000580127 BTF3P20290 206 aaKnown RBP12.5□□□□□ -0.41
MKS1-209ENST00000580127 M6PRP20645 277 aa12.5□□□□□ -0.41
MKS1-209ENST00000580127 TEPPQ6URK8 271 aa12.5□□□□□ -0.41
MKS1-209ENST00000580127 LCN15Q6UWW0 184 aa12.5□□□□□ -0.41
MKS1-209ENST00000580127 OR10P1Q8NGE3 313 aa12.5□□□□□ -0.41
MKS1-209ENST00000580127 SMIM8Q96KF7 97 aa12.5□□□□□ -0.41
MKS1-209ENST00000580127 SLC50A1Q9BRV3 221 aa12.5□□□□□ -0.41
MKS1-209ENST00000580127 SLIRPQ9GZT3 109 aaKnown RBP12.5□□□□□ -0.41
MKS1-209ENST00000580127 MGAT4CQ9UBM8 478 aa12.5□□□□□ -0.41
MKS1-209ENST00000580127 SNURFLB1AK76 121 aa12.49□□□□□ -0.41
MKS1-209ENST00000580127 FNDC10F2Z333 226 aa12.49□□□□□ -0.41
MKS1-209ENST00000580127 S100A5P33763 92 aa12.49□□□□□ -0.41
MKS1-209ENST00000580127 DLK1P80370 383 aa12.49□□□□□ -0.41
MKS1-209ENST00000580127 CCDC190Q86UF4 302 aa12.49□□□□□ -0.41
MKS1-209ENST00000580127 RXFP4Q8TDU9 374 aa12.49□□□□□ -0.41
MKS1-209ENST00000580127 UHRF2Q96PU4 802 aa12.49□□□□□ -0.41
MKS1-209ENST00000580127 DNAH11Q96DT5 4516 aa12.49□□□□□ -0.41
MKS1-209ENST00000580127 TRAV26-1A0A087WT03 109 aa12.48□□□□□ -0.41
MKS1-209ENST00000580127 A0A1W2PPQ1 181 aa12.48□□□□□ -0.41
MKS1-209ENST00000580127 PMS2P5A8MQ11 134 aa12.48□□□□□ -0.41
MKS1-209ENST00000580127 RLN2P04090 185 aa12.48□□□□□ -0.41
MKS1-209ENST00000580127 POLR2GP62487 172 aaKnown RBP eCLIP12.48□□□□□ -0.41
MKS1-209ENST00000580127 SPATA12Q7Z6I5 190 aa12.48□□□□□ -0.41
MKS1-209ENST00000580127 BPIFA4PQ86YQ2 179 aa12.48□□□□□ -0.41
MKS1-209ENST00000580127 Q8N1X5 172 aa12.48□□□□□ -0.41
MKS1-209ENST00000580127 ARV1Q9H2C2 271 aa12.48□□□□□ -0.41
MKS1-209ENST00000580127 H3BNG1 76 aa12.47□□□□□ -0.41
MKS1-209ENST00000580127 INPP1P49441 399 aa12.47□□□□□ -0.41
MKS1-209ENST00000580127 RNASE8Q8TDE3 154 aaKnown RBP12.47□□□□□ -0.41
MKS1-209ENST00000580127 K7EPK0 472 aa12.46□□□□□ -0.41
MKS1-209ENST00000580127 SSSCA1O60232 199 aa12.46□□□□□ -0.41
MKS1-209ENST00000580127 RRAS2P62070 204 aaPredicted RBP12.46□□□□□ -0.41
MKS1-209ENST00000580127 C4orf46Q504U0 113 aa12.46□□□□□ -0.41
MKS1-209ENST00000580127 ZNF546Q86UE3 836 aa12.46□□□□□ -0.41
MKS1-209ENST00000580127 TRIM63Q969Q1 353 aa12.46□□□□□ -0.41
MKS1-209ENST00000580127 Q9H3A6 140 aa12.46□□□□□ -0.41
MKS1-209ENST00000580127 SCRT2Q9NQ03 307 aa12.46□□□□□ -0.41
MKS1-209ENST00000580127 ZNF331Q9NQX6 463 aaPredicted RBP12.46□□□□□ -0.41
MKS1-209ENST00000580127 PXMP4Q9Y6I8 212 aa12.46□□□□□ -0.41
MKS1-209ENST00000580127 C9orf170A2RU37 121 aa12.45□□□□□ -0.42
MKS1-209ENST00000580127 TAS2R30P59541 319 aa12.45□□□□□ -0.42
MKS1-209ENST00000580127 RAB31Q13636 194 aa12.45□□□□□ -0.42
MKS1-209ENST00000580127 LINC00305Q7Z4B0 112 aa12.45□□□□□ -0.42
MKS1-209ENST00000580127 DYNC1H1Q14204 4646 aaKnown RBP12.44□□□□□ -0.42
MKS1-209ENST00000580127 A0A0J9YY99 117 aa12.44□□□□□ -0.42
MKS1-209ENST00000580127 H3BMQ9 156 aa12.44□□□□□ -0.42
MKS1-209ENST00000580127 ZNF701M0R085 212 aaPredicted RBP12.44□□□□□ -0.42
MKS1-209ENST00000580127 COX7A2P2O60397 106 aa12.44□□□□□ -0.42
MKS1-209ENST00000580127 METTL15P1P0C7V9 234 aa12.44□□□□□ -0.42
MKS1-209ENST00000580127 LEPP41159 167 aa12.44□□□□□ -0.42
MKS1-209ENST00000580127 PATE2Q6UY27 113 aa12.44□□□□□ -0.42
MKS1-209ENST00000580127 UPK3BQ9BT76 320 aa12.44□□□□□ -0.42
MKS1-209ENST00000580127 GGACTQ9BVM4 153 aa12.44□□□□□ -0.42
MKS1-209ENST00000580127 GAGE12BA1L429 117 aa12.43□□□□□ -0.42
MKS1-209ENST00000580127 NAP1L6A6NFF2 107 aa12.43□□□□□ -0.42
MKS1-209ENST00000580127 EREGO14944 169 aa12.43□□□□□ -0.42
MKS1-209ENST00000580127 TSC22D2O75157 780 aa12.43□□□□□ -0.42
MKS1-209ENST00000580127 GAGE7O76087 117 aa12.43□□□□□ -0.42
MKS1-209ENST00000580127 GAGE12FP0CL80 117 aa12.43□□□□□ -0.42
MKS1-209ENST00000580127 GAGE12GP0CL81 117 aa12.43□□□□□ -0.42
MKS1-209ENST00000580127 GAGE12IP0CL82 117 aa12.43□□□□□ -0.42
MKS1-209ENST00000580127 GUK1Q16774 197 aa12.43□□□□□ -0.42
MKS1-209ENST00000580127 TMEM14EPQ6UXP3 125 aa12.43□□□□□ -0.42
MKS1-209ENST00000580127 Q6ZRG5 221 aa12.43□□□□□ -0.42
MKS1-209ENST00000580127 PTTG2Q9NZH5 202 aa12.43□□□□□ -0.42
MKS1-209ENST00000580127 AGPAT2O15120 278 aa12.42□□□□□ -0.42
MKS1-209ENST00000580127 SCGB1D2O95969 90 aa12.42□□□□□ -0.42
MKS1-209ENST00000580127 SLC38A11Q08AI6 406 aa12.42□□□□□ -0.42
MKS1-209ENST00000580127 ESRGQ1W209 222 aa12.42□□□□□ -0.42
MKS1-209ENST00000580127 SPANXN2Q5MJ10 180 aa12.42□□□□□ -0.42
MKS1-209ENST00000580127 C10orf113Q5VZT2 155 aa12.42□□□□□ -0.42
MKS1-209ENST00000580127 LINC00612Q8N6U2 182 aa12.42□□□□□ -0.42
MKS1-209ENST00000580127 PYGO2Q9BRQ0 406 aa12.42□□□□□ -0.42
MKS1-209ENST00000580127 DNAJC4Q9NNZ3 241 aa12.42□□□□□ -0.42
MKS1-209ENST00000580127 MRPS16Q9Y3D3 137 aaKnown RBP12.42□□□□□ -0.42
MKS1-209ENST00000580127 ABCA13Q86UQ4 5058 aa12.41□□□□□ -0.42
MKS1-209ENST00000580127 CENPXA8MT69 81 aa12.41□□□□□ -0.42
MKS1-209ENST00000580127 MRPS12O15235 138 aaKnown RBP12.41□□□□□ -0.42
MKS1-209ENST00000580127 DAZ2Q13117 558 aaKnown RBP12.41□□□□□ -0.42
MKS1-209ENST00000580127 GFI1BQ5VTD9 330 aa12.41□□□□□ -0.42
MKS1-209ENST00000580127 ODF3Q96PU9 254 aa12.41□□□□□ -0.42
MKS1-209ENST00000580127 GSKIPQ9P0R6 139 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms