RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 CLEC5AQ9NY25 188 aa10.97□□□□□ -0.65
RNF43-202ENST00000577625 TECRQ9NZ01 308 aaKnown RBP10.97□□□□□ -0.65
RNF43-202ENST00000577625 HILPDAQ9Y5L2 63 aa10.97□□□□□ -0.65
RNF43-202ENST00000577625 A0A1W2PRD5 423 aa10.96□□□□□ -0.65
RNF43-202ENST00000577625 A0A1W2PRF3 423 aa10.96□□□□□ -0.65
RNF43-202ENST00000577625 A0A1W2PRM7 423 aa10.96□□□□□ -0.65
RNF43-202ENST00000577625 A1L4Q6 167 aa10.96□□□□□ -0.65
RNF43-202ENST00000577625 H3BRM9 83 aa10.96□□□□□ -0.65
RNF43-202ENST00000577625 ISLRO14498 428 aa10.96□□□□□ -0.65
RNF43-202ENST00000577625 COX6B1P14854 86 aa10.96□□□□□ -0.65
RNF43-202ENST00000577625 OR5A1Q8NGJ0 315 aa10.96□□□□□ -0.65
RNF43-202ENST00000577625 ZNF48Q96MX3 618 aaPredicted RBP10.96□□□□□ -0.65
RNF43-202ENST00000577625 PMCHL2Q9BQD1 86 aa10.96□□□□□ -0.65
RNF43-202ENST00000577625 TMEM191AQ9H0A3 160 aa10.96□□□□□ -0.65
RNF43-202ENST00000577625 CELSR2Q9HCU4 2923 aa10.96□□□□□ -0.65
RNF43-202ENST00000577625 FBN2P35556 2912 aa10.96□□□□□ -0.66
RNF43-202ENST00000577625 A0A087X0K7 114 aa10.96□□□□□ -0.66
RNF43-202ENST00000577625 VWC2LB2RUY7 222 aa10.96□□□□□ -0.66
RNF43-202ENST00000577625 FOXH1O75593 365 aa10.96□□□□□ -0.66
RNF43-202ENST00000577625 AREGP15514 252 aa10.96□□□□□ -0.66
RNF43-202ENST00000577625 TCL1AP56279 114 aa10.96□□□□□ -0.66
RNF43-202ENST00000577625 PLP1P60201 277 aa10.96□□□□□ -0.66
RNF43-202ENST00000577625 CD69Q07108 199 aa10.96□□□□□ -0.66
RNF43-202ENST00000577625 RAB31Q13636 194 aa10.96□□□□□ -0.66
RNF43-202ENST00000577625 CENPWQ5EE01 88 aa10.96□□□□□ -0.66
RNF43-202ENST00000577625 NRGNQ92686 78 aa10.96□□□□□ -0.66
RNF43-202ENST00000577625 ABCA12Q86UK0 2595 aa10.95□□□□□ -0.66
RNF43-202ENST00000577625 IGHV4-61A0A0C4DH41 118 aa10.95□□□□□ -0.66
RNF43-202ENST00000577625 SYS1-DBNDD2H3BUS1 97 aa10.95□□□□□ -0.66
RNF43-202ENST00000577625 ACTL6BO94805 426 aa10.95□□□□□ -0.66
RNF43-202ENST00000577625 GCHFRP30047 84 aa10.95□□□□□ -0.66
RNF43-202ENST00000577625 SUB1P53999 127 aaKnown RBP eCLIP10.95□□□□□ -0.66
RNF43-202ENST00000577625 MIC13Q5XKP0 118 aa10.95□□□□□ -0.66
RNF43-202ENST00000577625 PPP1R27Q86WC6 154 aa10.95□□□□□ -0.66
RNF43-202ENST00000577625 OR2T6Q8NHC8 308 aa10.95□□□□□ -0.66
RNF43-202ENST00000577625 CACNG8Q8WXS5 425 aa10.95□□□□□ -0.66
RNF43-202ENST00000577625 ZC2HC1AQ96GY0 325 aa10.95□□□□□ -0.66
RNF43-202ENST00000577625 NPFFR1Q9GZQ6 430 aa10.95□□□□□ -0.66
RNF43-202ENST00000577625 RNASE7Q9H1E1 156 aaKnown RBP10.95□□□□□ -0.66
RNF43-202ENST00000577625 VPS13CQ709C8 3753 aa10.95□□□□□ -0.66
RNF43-202ENST00000577625 HELTA6NFD8 242 aa10.94□□□□□ -0.66
RNF43-202ENST00000577625 RPL27AP46776 148 aaKnown RBP10.94□□□□□ -0.66
RNF43-202ENST00000577625 OOSP1A8MZH6 123 aa10.94□□□□□ -0.66
RNF43-202ENST00000577625 FXYD3Q14802 87 aa10.94□□□□□ -0.66
RNF43-202ENST00000577625 TIGITQ495A1 244 aa10.94□□□□□ -0.66
RNF43-202ENST00000577625 MINOS1Q5TGZ0 78 aa10.94□□□□□ -0.66
RNF43-202ENST00000577625 DYNAPQ8N1N2 210 aa10.94□□□□□ -0.66
RNF43-202ENST00000577625 OR2K2Q8NGT1 345 aa10.94□□□□□ -0.66
RNF43-202ENST00000577625 SSBP4Q9BWG4 385 aaPredicted RBP10.94□□□□□ -0.66
RNF43-202ENST00000577625 MINOS1-NBL1R4GNA1 71 aa10.94□□□□□ -0.66
RNF43-202ENST00000577625 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.94□□□□□ -0.664e-10■■■□□ 18.3
RNF43-202ENST00000577625 IGHV4-30-2A0A087WSY4 118 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 A6NDN8 102 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 RAB9AP51151 201 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 SMAGPQ0VAQ4 97 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 TMEM97Q5BJF2 176 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 FAM120AOSQ5T036 256 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 CCDC144NLQ6NUI1 221 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 PQLC2Q6ZP29 291 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 SSMEM1Q8WWF3 244 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 PERPQ96FX8 193 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 JMJD8Q96S16 334 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 GTSF1LQ9H1H1 148 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 FBXL15Q9H469 300 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 OR2J3O76001 311 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 PRR20EP86478 221 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 PRR20CP86479 221 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 PRR20DP86480 221 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 PRR20BP86481 221 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 PRR20AP86496 221 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 IBA57Q5T440 356 aaKnown RBP10.93□□□□□ -0.66
RNF43-202ENST00000577625 STPG3Q8N7X2 389 aa10.93□□□□□ -0.66
RNF43-202ENST00000577625 ABCA1O95477 2261 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 DOPEY2Q9Y3R5 2298 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 IGKV1OR2-108A0A075B7D4 117 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 PSMB11A5LHX3 300 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 SSBP2P81877 361 aaPredicted RBP10.92□□□□□ -0.66
RNF43-202ENST00000577625 HSD52Q0P140 79 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 PVRIGQ6DKI7 326 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 BPIFA4PQ86YQ2 179 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 OR10AG1Q8NH19 301 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 TENM4Q6N022 2769 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 NDUFA3O95167 84 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 MOSP00540 346 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 COX8AP10176 69 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 HIST1H1EP10412 219 aaKnown RBP10.92□□□□□ -0.66
RNF43-202ENST00000577625 CD24P25063 80 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 UBE2E1P51965 193 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 MLANAQ16655 118 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 C2orf91Q6ZV80 131 aa10.92□□□□□ -0.66
RNF43-202ENST00000577625 H3BUT2 72 aa10.91□□□□□ -0.66
RNF43-202ENST00000577625 NBR2O15453 112 aa10.91□□□□□ -0.66
RNF43-202ENST00000577625 CKS1BP61024 79 aa10.91□□□□□ -0.66
RNF43-202ENST00000577625 NPBQ8NG41 125 aa10.91□□□□□ -0.66
RNF43-202ENST00000577625 AJUBAQ96IF1 538 aa10.91□□□□□ -0.66
RNF43-202ENST00000577625 SVEP1Q4LDE5 3571 aa10.9□□□□□ -0.66
RNF43-202ENST00000577625 A0A0G2JLM5 398 aa10.9□□□□□ -0.66
RNF43-202ENST00000577625 TMEM189A5PLL7 270 aa10.9□□□□□ -0.66
RNF43-202ENST00000577625 TEX22C9J3V5 150 aa10.9□□□□□ -0.66
RNF43-202ENST00000577625 LEPROTL1O95214 131 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms