RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 MYCNOSP40205 109 aa10.41□□□□□ -0.74
CCDC40-209ENST00000573474 MEOX2P50222 304 aa10.41□□□□□ -0.74
CCDC40-209ENST00000573474 SUMO1P63165 101 aaKnown RBP10.41□□□□□ -0.74
CCDC40-209ENST00000573474 NSUN5P1Q3KNT7 163 aa10.41□□□□□ -0.74
CCDC40-209ENST00000573474 AWAT1Q58HT5 328 aa10.41□□□□□ -0.74
CCDC40-209ENST00000573474 SIGLEC15Q6ZMC9 328 aa10.41□□□□□ -0.74
CCDC40-209ENST00000573474 CCDC28AQ8IWP9 274 aa10.41□□□□□ -0.74
CCDC40-209ENST00000573474 LYPD1Q8N2G4 141 aa10.41□□□□□ -0.74
CCDC40-209ENST00000573474 DLX4Q92988 240 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-209ENST00000573474 C17orf77Q96MU5 243 aa10.41□□□□□ -0.74
CCDC40-209ENST00000573474 OTORQ9NRC9 128 aa10.41□□□□□ -0.74
CCDC40-209ENST00000573474 SETD2Q9BYW2 2564 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-209ENST00000573474 JMJD1CQ15652 2540 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 PGPA6NDG6 321 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 HELTA6NFD8 242 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 C2orf70A6NJV1 201 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 GGTLC3B5MD39 225 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 F8W036 122 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 ZNF253O75346 499 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 NDUFB4O95168 129 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 PSG9Q00887 426 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 SOHLH1Q5JUK2 328 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 CYB561D1Q8N8Q1 229 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 OR9G4Q8NGQ1 327 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 LINC00052Q96N35 136 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 TCEAL7Q9BRU2 100 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 SEC11CQ9BY50 192 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 Q9H3A6 140 aa10.4□□□□□ -0.74
CCDC40-209ENST00000573474 M0QZ24 198 aa10.39□□□□□ -0.75
CCDC40-209ENST00000573474 CBLN1P23435 193 aa10.39□□□□□ -0.75
CCDC40-209ENST00000573474 CEBPGP53567 150 aa10.39□□□□□ -0.75
CCDC40-209ENST00000573474 KRTAP24-1Q3LI83 254 aa10.39□□□□□ -0.75
CCDC40-209ENST00000573474 C10orf91Q5T1B1 145 aa10.39□□□□□ -0.75
CCDC40-209ENST00000573474 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.39□□□□□ -0.75
CCDC40-209ENST00000573474 PRIMA1Q86XR5 153 aa10.39□□□□□ -0.75
CCDC40-209ENST00000573474 SCO2A0A1W2PP80 73 aa10.38□□□□□ -0.75
CCDC40-209ENST00000573474 SLC17A3O00476 420 aa10.38□□□□□ -0.75
CCDC40-209ENST00000573474 SLC25A5P05141 298 aaKnown RBP10.38□□□□□ -0.75
CCDC40-209ENST00000573474 FOLR2P14207 255 aa10.38□□□□□ -0.75
CCDC40-209ENST00000573474 EDN2P20800 178 aa10.38□□□□□ -0.75
CCDC40-209ENST00000573474 C11orf52Q96A22 123 aa10.38□□□□□ -0.75
CCDC40-209ENST00000573474 EPDR1Q9UM22 224 aa10.38□□□□□ -0.75
CCDC40-209ENST00000573474 CSN3P07498 182 aa10.37□□□□□ -0.75
CCDC40-209ENST00000573474 ADCYAP1P18509 176 aa10.37□□□□□ -0.75
CCDC40-209ENST00000573474 FAM74A3Q4VXF1 159 aa10.37□□□□□ -0.75
CCDC40-209ENST00000573474 FAM90A2PQ658T7 463 aa10.37□□□□□ -0.75
CCDC40-209ENST00000573474 TCF24Q7RTU0 167 aa10.37□□□□□ -0.75
CCDC40-209ENST00000573474 EXOC3-AS1Q8N2X6 119 aa10.37□□□□□ -0.75
CCDC40-209ENST00000573474 C5orf17Q8NAS9 161 aa10.37□□□□□ -0.75
CCDC40-209ENST00000573474 HIST1H2BAQ96A08 127 aa10.37□□□□□ -0.75
CCDC40-209ENST00000573474 RPUSD4Q96CM3 377 aaKnown RBP10.37□□□□□ -0.75
CCDC40-209ENST00000573474 CITED1Q99966 193 aa10.37□□□□□ -0.75
CCDC40-209ENST00000573474 SLC50A1Q9BRV3 221 aa10.37□□□□□ -0.75
CCDC40-209ENST00000573474 AAMDCQ9H7C9 122 aa10.37□□□□□ -0.75
CCDC40-209ENST00000573474 ZNF331Q9NQX6 463 aaPredicted RBP10.37□□□□□ -0.75
CCDC40-209ENST00000573474 CARHSP1Q9Y2V2 147 aaKnown RBP10.37□□□□□ -0.75
CCDC40-209ENST00000573474 OVOL1O14753 267 aa10.36□□□□□ -0.75
CCDC40-209ENST00000573474 RPL11P62913 178 aaKnown RBP10.36□□□□□ -0.75
CCDC40-209ENST00000573474 ADAMTSL5Q6ZMM2 481 aa10.36□□□□□ -0.75
CCDC40-209ENST00000573474 CMTM2Q8TAZ6 248 aa10.36□□□□□ -0.75
CCDC40-209ENST00000573474 NRN1Q9NPD7 142 aa10.36□□□□□ -0.75
CCDC40-209ENST00000573474 CLEC5AQ9NY25 188 aa10.36□□□□□ -0.75
CCDC40-209ENST00000573474 ZNF727A8MUV8 499 aa10.35□□□□□ -0.75
CCDC40-209ENST00000573474 PEX7O00628 323 aa10.35□□□□□ -0.75
CCDC40-209ENST00000573474 CSN1S1P47710 185 aa10.35□□□□□ -0.75
CCDC40-209ENST00000573474 ZNF674Q2M3X9 581 aa10.35□□□□□ -0.75
CCDC40-209ENST00000573474 SAMD13Q5VXD3 122 aa10.35□□□□□ -0.75
CCDC40-209ENST00000573474 ARL6IP6Q8N6S5 226 aa10.35□□□□□ -0.75
CCDC40-209ENST00000573474 C2CD4CQ8TF44 421 aa10.35□□□□□ -0.75
CCDC40-209ENST00000573474 C16orf92Q96LL3 132 aa10.35□□□□□ -0.75
CCDC40-209ENST00000573474 SMIM7Q9BQ49 75 aa10.35□□□□□ -0.75
CCDC40-209ENST00000573474 PARLQ9H300 379 aa10.35□□□□□ -0.75
CCDC40-209ENST00000573474 MLXQ9UH92 298 aa10.35□□□□□ -0.75
CCDC40-209ENST00000573474 PRELID1Q9Y255 219 aa10.35□□□□□ -0.75
CCDC40-209ENST00000573474 APOC3P02656 99 aa10.34□□□□□ -0.75
CCDC40-209ENST00000573474 TCRAP04437 139 aa10.34□□□□□ -0.75
CCDC40-209ENST00000573474 AKR1C3P42330 323 aa10.34□□□□□ -0.75
CCDC40-209ENST00000573474 GNG5P63218 68 aa10.34□□□□□ -0.75
CCDC40-209ENST00000573474 NIPSNAP3BQ9BS92 247 aa10.34□□□□□ -0.75
CCDC40-209ENST00000573474 ATG101Q9BSB4 218 aa10.34□□□□□ -0.75
CCDC40-209ENST00000573474 SIGLEC8Q9NYZ4 499 aa10.34□□□□□ -0.75
CCDC40-209ENST00000573474 TRAV8-2A0A0B4J237 113 aa10.33□□□□□ -0.76
CCDC40-209ENST00000573474 PF4P02776 101 aa10.33□□□□□ -0.76
CCDC40-209ENST00000573474 S100A9P06702 114 aaKnown RBP10.33□□□□□ -0.76
CCDC40-209ENST00000573474 CNN1P51911 297 aaKnown RBP10.33□□□□□ -0.76
CCDC40-209ENST00000573474 TMEM241Q24JQ0 296 aa10.33□□□□□ -0.76
CCDC40-209ENST00000573474 DYNLRB2Q8TF09 96 aa10.33□□□□□ -0.76
CCDC40-209ENST00000573474 TMEM158Q8WZ71 300 aa10.33□□□□□ -0.76
CCDC40-209ENST00000573474 MRPL53Q96EL3 112 aaKnown RBP10.33□□□□□ -0.76
CCDC40-209ENST00000573474 DERL1Q9BUN8 251 aa10.33□□□□□ -0.76
CCDC40-209ENST00000573474 RPH3ALQ9UNE2 315 aa10.33□□□□□ -0.76
CCDC40-209ENST00000573474 SELENOKQ9Y6D0 94 aa10.33□□□□□ -0.76
CCDC40-209ENST00000573474 IGKV3-7A0A075B6H7 116 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 SERTM2A0A1B0GWG4 89 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 DIRC3C9JPN6 131 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 K7EQM0 130 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 M0R3E3 92 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 DNASE2O00115 360 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-209ENST00000573474 ISLRO14498 428 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 SOCS3O14543 225 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms