RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 PRRG2O14669 202 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 AMMECR1LQ6DCA0 310 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 FA2HQ7L5A8 372 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 SCNM1Q9BWG6 230 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 SERTM2A0A1B0GWG4 89 aa13.8□□□□□ -0.2
SCARF1-205ENST00000571272 TCTAP57738 103 aa13.8□□□□□ -0.2
SCARF1-205ENST00000571272 LINC01545Q5VT33 79 aa13.8□□□□□ -0.2
SCARF1-205ENST00000571272 RPEQ96AT9 228 aa13.8□□□□□ -0.2
SCARF1-205ENST00000571272 ZNF747Q9BV97 191 aa13.8□□□□□ -0.2
SCARF1-205ENST00000571272 E7EQL1 145 aa13.8□□□□□ -0.2
SCARF1-205ENST00000571272 KLF17Q5JT82 389 aaPredicted RBP13.8□□□□□ -0.2
SCARF1-205ENST00000571272 SIGLEC15Q6ZMC9 328 aa13.8□□□□□ -0.2
SCARF1-205ENST00000571272 C8orf49Q96NF6 230 aa13.8□□□□□ -0.2
SCARF1-205ENST00000571272 ARHGAP32A7KAX9 2087 aa13.79□□□□□ -0.2
SCARF1-205ENST00000571272 IFI27P40305 119 aaPredicted RBP13.79□□□□□ -0.2
SCARF1-205ENST00000571272 LOXL1Q08397 574 aaPredicted RBP13.79□□□□□ -0.2
SCARF1-205ENST00000571272 BCL6BQ8N143 479 aaPredicted RBP13.79□□□□□ -0.2
SCARF1-205ENST00000571272 SHANK2-AS3Q9BTD1 123 aa13.79□□□□□ -0.2
SCARF1-205ENST00000571272 RALYQ9UKM9 306 aaKnown RBP13.79□□□□□ -0.2
SCARF1-205ENST00000571272 VSTM5A8MXK1 200 aa13.79□□□□□ -0.2
SCARF1-205ENST00000571272 IL4P05112 153 aa13.79□□□□□ -0.2
SCARF1-205ENST00000571272 FCGR2BP31994 310 aaPredicted RBP13.79□□□□□ -0.2
SCARF1-205ENST00000571272 FXYD7P58549 80 aa13.79□□□□□ -0.2
SCARF1-205ENST00000571272 PSG3Q16557 428 aa13.78□□□□□ -0.2
SCARF1-205ENST00000571272 TMEM75Q8N9X5 138 aa13.78□□□□□ -0.2
SCARF1-205ENST00000571272 OR8A1Q8NGG7 326 aa13.78□□□□□ -0.2
SCARF1-205ENST00000571272 MS4A6AQ9H2W1 248 aa13.78□□□□□ -0.2
SCARF1-205ENST00000571272 WNK2Q9Y3S1 2297 aa13.78□□□□□ -0.2
SCARF1-205ENST00000571272 K7EIM0 57 aa13.78□□□□□ -0.2
SCARF1-205ENST00000571272 GPR183P32249 361 aa13.78□□□□□ -0.2
SCARF1-205ENST00000571272 K7EQM0 130 aa13.77□□□□□ -0.2
SCARF1-205ENST00000571272 CSN1S1P47710 185 aa13.77□□□□□ -0.2
SCARF1-205ENST00000571272 RHOGP84095 191 aa13.77□□□□□ -0.2
SCARF1-205ENST00000571272 HIST1H1AQ02539 215 aaPredicted RBP13.77□□□□□ -0.2
SCARF1-205ENST00000571272 PAX2Q02962 417 aa13.77□□□□□ -0.2
SCARF1-205ENST00000571272 OR10AG1Q8NH19 301 aa13.77□□□□□ -0.2
SCARF1-205ENST00000571272 SHISA9B4DS77 424 aa13.77□□□□□ -0.21
SCARF1-205ENST00000571272 LDLRAD2Q5SZI1 272 aa13.77□□□□□ -0.21
SCARF1-205ENST00000571272 ZNF491Q8N8L2 437 aa13.77□□□□□ -0.21
SCARF1-205ENST00000571272 TNFRSF14Q92956 283 aa13.77□□□□□ -0.21
SCARF1-205ENST00000571272 TMEM213A2RRL7 107 aa13.77□□□□□ -0.21
SCARF1-205ENST00000571272 H3BRN7 92 aa13.77□□□□□ -0.21
SCARF1-205ENST00000571272 CDKN1BP46527 198 aa13.77□□□□□ -0.21
SCARF1-205ENST00000571272 RNF125Q96EQ8 232 aa13.77□□□□□ -0.21
SCARF1-205ENST00000571272 D6R8Y8 96 aa13.76□□□□□ -0.21
SCARF1-205ENST00000571272 PSG9Q00887 426 aa13.76□□□□□ -0.21
SCARF1-205ENST00000571272 LRBAP50851 2863 aa13.76□□□□□ -0.21
SCARF1-205ENST00000571272 COX8AP10176 69 aa13.76□□□□□ -0.21
SCARF1-205ENST00000571272 C2orf91Q6ZV80 131 aa13.76□□□□□ -0.21
SCARF1-205ENST00000571272 ZNF414Q96IQ9 312 aa13.76□□□□□ -0.21
SCARF1-205ENST00000571272 ZFHX2Q9C0A1 2572 aaPredicted RBP13.75□□□□□ -0.21
SCARF1-205ENST00000571272 PPIAL4CA0A0B4J2A2 164 aa13.75□□□□□ -0.21
SCARF1-205ENST00000571272 PPIAL4GP0DN37 164 aa13.75□□□□□ -0.21
SCARF1-205ENST00000571272 LYZL1Q6UWQ5 148 aa13.75□□□□□ -0.21
SCARF1-205ENST00000571272 AMN1Q8IY45 258 aa13.75□□□□□ -0.21
SCARF1-205ENST00000571272 TRAV8-6A0A0B4J262 113 aa13.75□□□□□ -0.21
SCARF1-205ENST00000571272 TIMM23O14925 209 aa13.75□□□□□ -0.21
SCARF1-205ENST00000571272 CT45A10P0DMU9 189 aa13.75□□□□□ -0.21
SCARF1-205ENST00000571272 A0A096LNJ9 63 aa13.74□□□□□ -0.21
SCARF1-205ENST00000571272 TRBV6-1A0A0K0K1D8 114 aa13.74□□□□□ -0.21
SCARF1-205ENST00000571272 CD5LO43866 347 aa13.74□□□□□ -0.21
SCARF1-205ENST00000571272 UQCRFS1P47985 274 aa13.74□□□□□ -0.21
SCARF1-205ENST00000571272 ANKRD39Q53RE8 183 aa13.74□□□□□ -0.21
SCARF1-205ENST00000571272 GFRALQ6UXV0 394 aa13.74□□□□□ -0.21
SCARF1-205ENST00000571272 CST9LQ9H4G1 147 aa13.74□□□□□ -0.21
SCARF1-205ENST00000571272 SIGLEC8Q9NYZ4 499 aa13.74□□□□□ -0.21
SCARF1-205ENST00000571272 HILPDAQ9Y5L2 63 aa13.74□□□□□ -0.21
SCARF1-205ENST00000571272 SELENOKQ9Y6D0 94 aa13.74□□□□□ -0.21
SCARF1-205ENST00000571272 IGF2-ASQ6U949 168 aa13.73□□□□□ -0.21
SCARF1-205ENST00000571272 ONECUT1Q9UBC0 465 aa13.73□□□□□ -0.21
SCARF1-205ENST00000571272 ZNF292O60281 2723 aa13.73□□□□□ -0.21
SCARF1-205ENST00000571272 MRPS12O15235 138 aaKnown RBP13.73□□□□□ -0.21
SCARF1-205ENST00000571272 NHLH1Q02575 133 aa13.73□□□□□ -0.21
SCARF1-205ENST00000571272 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
SCARF1-205ENST00000571272 PRELID3AQ96N28 172 aa13.73□□□□□ -0.21
SCARF1-205ENST00000571272 DCHS2Q6V1P9 2916 aa13.72□□□□□ -0.21
SCARF1-205ENST00000571272 RELNP78509 3460 aa13.72□□□□□ -0.21
SCARF1-205ENST00000571272 ABHD17AQ96GS6 310 aa13.72□□□□□ -0.21
SCARF1-205ENST00000571272 MED13LQ71F56 2210 aa13.72□□□□□ -0.21
SCARF1-205ENST00000571272 C7orf71A4D174 169 aa13.72□□□□□ -0.21
SCARF1-205ENST00000571272 TMEM189A5PLL7 270 aa13.72□□□□□ -0.21
SCARF1-205ENST00000571272 GNG7O60262 68 aa13.72□□□□□ -0.21
SCARF1-205ENST00000571272 GATD1Q8NB37 220 aa13.72□□□□□ -0.21
SCARF1-205ENST00000571272 IGKV2-40A0A087WW87 121 aaPredicted RBP13.71□□□□□ -0.21
SCARF1-205ENST00000571272 A0A1B0GW15 77 aa13.71□□□□□ -0.21
SCARF1-205ENST00000571272 SMKR1H3BMG3 65 aa13.71□□□□□ -0.21
SCARF1-205ENST00000571272 IGKV2D-40P01614 121 aaPredicted RBP13.71□□□□□ -0.21
SCARF1-205ENST00000571272 LYPD1Q8N2G4 141 aa13.71□□□□□ -0.21
SCARF1-205ENST00000571272 AAMDCQ9H7C9 122 aa13.71□□□□□ -0.21
SCARF1-205ENST00000571272 CACNA1BQ00975 2339 aa13.71□□□□□ -0.21
SCARF1-205ENST00000571272 SH2D1AO60880 128 aa13.71□□□□□ -0.22
SCARF1-205ENST00000571272 TMEM97Q5BJF2 176 aa13.71□□□□□ -0.22
SCARF1-205ENST00000571272 JKAMPQ9P055 326 aa13.71□□□□□ -0.22
SCARF1-205ENST00000571272 NBASA2RRP1 2371 aa13.71□□□□□ -0.22
SCARF1-205ENST00000571272 SVEP1Q4LDE5 3571 aa13.7□□□□□ -0.22
SCARF1-205ENST00000571272 IGHV3-23P01764 117 aa13.7□□□□□ -0.22
SCARF1-205ENST00000571272 APOBEC3AP31941 199 aaPredicted RBP13.7□□□□□ -0.22
SCARF1-205ENST00000571272 CACNG7P62955 275 aa13.7□□□□□ -0.22
SCARF1-205ENST00000571272 OCIAD2Q56VL3 154 aa13.7□□□□□ -0.22
SCARF1-205ENST00000571272 SAPCD1Q5SSQ6 148 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms