RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 SIGLECL1Q8N7X8 197 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 AJUBAQ96IF1 538 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 NDUFAF3Q9BU61 184 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 SAMD10Q9BYL1 202 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 BPESC1Q9GZL8 116 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 AAMDCQ9H7C9 122 aa6.34□□□□□ -1.39
SMAD3-212ENST00000559937 WNK2Q9Y3S1 2297 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 DIRC3C9JPN6 131 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 NDUFS8O00217 210 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 NPFFO15130 113 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 SPINK4O60575 86 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 ZNF324O75467 553 aaPredicted RBP6.33□□□□□ -1.4
SMAD3-212ENST00000559937 CA1P00915 261 aaPredicted RBP6.33□□□□□ -1.4
SMAD3-212ENST00000559937 RAB4AP20338 218 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 COL8A1P27658 744 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 SAA4P35542 130 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 CSN1S1P47710 185 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 CRIP2P52943 208 aaPredicted RBP6.33□□□□□ -1.4
SMAD3-212ENST00000559937 SLC35B1P78383 322 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 SLAQ13239 276 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 KLF17Q5JT82 389 aaPredicted RBP6.33□□□□□ -1.4
SMAD3-212ENST00000559937 C1orf194Q5T5A4 169 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 Q6ZWC4 215 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 MRPL52Q86TS9 123 aaKnown RBP6.33□□□□□ -1.4
SMAD3-212ENST00000559937 EXOC3-AS1Q8N2X6 119 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 GATD1Q8NB37 220 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 C18orf32Q8TCD1 76 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 C14orf144Q96I85 54 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 HSPB9Q9BQS6 159 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 ALKBH7Q9BT30 221 aaPredicted RBP6.33□□□□□ -1.4
SMAD3-212ENST00000559937 PRO1933Q9H354 126 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 RABAC1Q9UI14 185 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 FBXL7Q9UJT9 491 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 PSG8Q9UQ74 426 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 ABCA1O95477 2261 aa6.33□□□□□ -1.4
SMAD3-212ENST00000559937 A0A087X0K7 114 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 CENPVL3A0A0U1RRI6 287 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 ZNF705FA8MVS1 300 aaPredicted RBP6.32□□□□□ -1.4
SMAD3-212ENST00000559937 F2Z2F3 143 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 H3BTX0 84 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 C19orf84I3L1E1 186 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 HAX1O00165 279 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 IGHV4-39P01824 125 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 CTSGP08311 255 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 SNRPCP09234 159 aaKnown RBP6.32□□□□□ -1.4
SMAD3-212ENST00000559937 ZNF705DP0CH99 300 aaPredicted RBP6.32□□□□□ -1.4
SMAD3-212ENST00000559937 ZNF705BP0CI00 300 aaPredicted RBP6.32□□□□□ -1.4
SMAD3-212ENST00000559937 UQCRFS1P47985 274 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 AMTP48728 403 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 PAX8Q06710 450 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 KIAA1644Q3SXP7 199 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 GDF5OSQ5U4N7 250 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 UNQ5815/PRO19632Q6UWF5 114 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 TOMM20LQ6UXN7 152 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 LINC00322Q6ZN03 302 aaPredicted RBP6.32□□□□□ -1.4
SMAD3-212ENST00000559937 PRNTQ86SH4 94 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 CIARTQ8N365 385 aaPredicted RBP6.32□□□□□ -1.4
SMAD3-212ENST00000559937 ZNF502Q8TBZ5 544 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 C20orf144Q9BQM9 153 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 PIMREGQ9BSJ6 248 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 LRBAP50851 2863 aa6.32□□□□□ -1.4
SMAD3-212ENST00000559937 ADGRG4Q8IZF6 3080 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 TRAV8-1A0A0A6YYK1 113 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 TRBV7-1A0A0A6YYK4 115 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 A0A1W2PS18 150 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 CYSRT1A8MQ03 144 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 VWC2LB2RUY7 222 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 CT45A10P0DMU9 189 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 SRSF1Q07955 248 aaKnown RBP eCLIP6.31□□□□□ -1.4
SMAD3-212ENST00000559937 RIGQ13278 110 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 SAPCD1Q5SSQ6 148 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 FAM120AOSQ5T036 256 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 TCF24Q7RTU0 167 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 OR2D3Q8NGH3 330 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 GTSF1Q8WW33 167 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 ZC2HC1AQ96GY0 325 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 SGK494Q96LW2 274 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 RCHY1Q96PM5 261 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 NRN1Q9NPD7 142 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 MOB4Q9Y3A3 225 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 MYO9AB2RTY4 2548 aa6.31□□□□□ -1.4
SMAD3-212ENST00000559937 ABCA2Q9BZC7 2435 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 A0A1B0GUT8 65 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 ATP6V0E1O15342 81 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 BRI3O95415 125 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 PMCHP20382 165 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 CAMPP49913 170 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 RPS20P60866 119 aaKnown RBP6.3□□□□□ -1.4
SMAD3-212ENST00000559937 SRSF2Q01130 221 aaKnown RBP6.3□□□□□ -1.4
SMAD3-212ENST00000559937 CRYBG3Q68DQ2 2970 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 C5orf56Q8N8D9 126 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 C10orf105Q8TEF2 133 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 EEF1AKMT3Q96AZ1 226 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 CHCHD1Q96BP2 118 aaKnown RBP6.3□□□□□ -1.4
SMAD3-212ENST00000559937 PGLYRP4Q96LB8 373 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 C17orf77Q96MU5 243 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 SLC50A1Q9BRV3 221 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 NDFIP1Q9BT67 221 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 TMUB1Q9BVT8 246 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 MEGF9Q9H1U4 602 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms