RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 TEX45Q8NA69 505 aa9.47□□□□□ -0.89
XRCC3-208ENST00000554811 GTSF1Q8WW33 167 aa9.47□□□□□ -0.89
XRCC3-208ENST00000554811 MAP1LC3CQ9BXW4 147 aa9.47□□□□□ -0.89
XRCC3-208ENST00000554811 AAMDCQ9H7C9 122 aa9.47□□□□□ -0.89
XRCC3-208ENST00000554811 A0A087X0K7 114 aa9.46□□□□□ -0.89
XRCC3-208ENST00000554811 CSN1S1P47710 185 aa9.46□□□□□ -0.89
XRCC3-208ENST00000554811 ITGB1BP1O14713 200 aa9.46□□□□□ -0.89
XRCC3-208ENST00000554811 TEX36Q5VZQ5 186 aa9.46□□□□□ -0.89
XRCC3-208ENST00000554811 RBPMS2Q6ZRY4 209 aaKnown RBP9.46□□□□□ -0.89
XRCC3-208ENST00000554811 AP1S3Q96PC3 154 aa9.46□□□□□ -0.89
XRCC3-208ENST00000554811 EPG5Q9HCE0 2579 aa9.46□□□□□ -0.9
XRCC3-208ENST00000554811 TRAV9-2A0A087WT02 112 aa9.46□□□□□ -0.9
XRCC3-208ENST00000554811 CEACAM8P31997 349 aaPredicted RBP9.46□□□□□ -0.9
XRCC3-208ENST00000554811 DEFB104AQ8WTQ1 72 aa9.46□□□□□ -0.9
XRCC3-208ENST00000554811 C8orf49Q96NF6 230 aa9.46□□□□□ -0.9
XRCC3-208ENST00000554811 TMEM191AQ9H0A3 160 aa9.46□□□□□ -0.9
XRCC3-208ENST00000554811 F11RQ9Y624 299 aaKnown RBP9.46□□□□□ -0.9
XRCC3-208ENST00000554811 LINC00614P0C842 121 aa9.45□□□□□ -0.9
XRCC3-208ENST00000554811 RAB37Q96AX2 223 aa9.45□□□□□ -0.9
XRCC3-208ENST00000554811 LINC00527Q9UJ94 153 aa9.45□□□□□ -0.9
XRCC3-208ENST00000554811 ZNF785A8K8V0 405 aa9.45□□□□□ -0.9
XRCC3-208ENST00000554811 IGLV2-23P01705 113 aa9.45□□□□□ -0.9
XRCC3-208ENST00000554811 TMEM155Q4W5P6 130 aa9.45□□□□□ -0.9
XRCC3-208ENST00000554811 SCNM1Q9BWG6 230 aa9.45□□□□□ -0.9
XRCC3-208ENST00000554811 HLA-DRB1P01911 266 aa9.45□□□□□ -0.9
XRCC3-208ENST00000554811 ASCL5Q7RTU5 278 aa9.45□□□□□ -0.9
XRCC3-208ENST00000554811 FAM169BQ8N8A8 192 aa9.45□□□□□ -0.9
XRCC3-208ENST00000554811 C8orf46Q8TAG6 207 aa9.45□□□□□ -0.9
XRCC3-208ENST00000554811 TMEM213A2RRL7 107 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 NPIPB5A8MRT5 1133 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 NMUP48645 174 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 RPL11P62913 178 aaKnown RBP9.44□□□□□ -0.9
XRCC3-208ENST00000554811 TWIST1Q15672 202 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 TMEM75Q8N9X5 138 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 ZNF738Q8NE65 137 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 AP5S1Q9NUS5 200 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 IGHV1-24A0A0C4DH33 117 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 A0A1B0GUT8 65 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 BUB1B-PAK6H3BSN5 160 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 HLA-DMBP28068 263 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 APOBEC3AP31941 199 aaPredicted RBP9.44□□□□□ -0.9
XRCC3-208ENST00000554811 SPATA12Q7Z6I5 190 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 DCHS2Q6V1P9 2916 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 SMIM15Q7Z3B0 74 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 RNF125Q96EQ8 232 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 HIF1ANQ9NWT6 349 aa9.44□□□□□ -0.9
XRCC3-208ENST00000554811 Q86TA4 180 aa9.43□□□□□ -0.9
XRCC3-208ENST00000554811 TIMD4Q96H15 378 aa9.43□□□□□ -0.9
XRCC3-208ENST00000554811 FMC1Q96HJ9 113 aa9.43□□□□□ -0.9
XRCC3-208ENST00000554811 PSG8Q9UQ74 426 aa9.43□□□□□ -0.9
XRCC3-208ENST00000554811 ZNF672Q499Z4 452 aaPredicted RBP9.43□□□□□ -0.9
XRCC3-208ENST00000554811 SLC25A34Q6PIV7 304 aa9.43□□□□□ -0.9
XRCC3-208ENST00000554811 NUP37Q8NFH4 326 aa9.43□□□□□ -0.9
XRCC3-208ENST00000554811 FNDC10F2Z333 226 aa9.43□□□□□ -0.9
XRCC3-208ENST00000554811 RIGQ13278 110 aa9.43□□□□□ -0.9
XRCC3-208ENST00000554811 AMN1Q8IY45 258 aa9.43□□□□□ -0.9
XRCC3-208ENST00000554811 RNASE8Q8TDE3 154 aaKnown RBP9.43□□□□□ -0.9
XRCC3-208ENST00000554811 CHODLQ9H9P2 273 aa9.43□□□□□ -0.9
XRCC3-208ENST00000554811 UFC1Q9Y3C8 167 aa9.43□□□□□ -0.9
XRCC3-208ENST00000554811 LRRK2Q5S007 2527 aa9.43□□□□□ -0.9
XRCC3-208ENST00000554811 TMEM189A5PLL7 270 aa9.42□□□□□ -0.9
XRCC3-208ENST00000554811 SYS1-DBNDD2H3BUS1 97 aa9.42□□□□□ -0.9
XRCC3-208ENST00000554811 NDUFS7O75251 213 aa9.42□□□□□ -0.9
XRCC3-208ENST00000554811 EVI2AP22794 236 aa9.42□□□□□ -0.9
XRCC3-208ENST00000554811 ATP5IP56385 69 aaPredicted RBP9.42□□□□□ -0.9
XRCC3-208ENST00000554811 Q8N976 141 aa9.42□□□□□ -0.9
XRCC3-208ENST00000554811 ZFP30Q9Y2G7 519 aa9.42□□□□□ -0.9
XRCC3-208ENST00000554811 PSMB11A5LHX3 300 aa9.42□□□□□ -0.9
XRCC3-208ENST00000554811 D6R8Y8 96 aa9.42□□□□□ -0.9
XRCC3-208ENST00000554811 IGLC1P0CG04 106 aa9.42□□□□□ -0.9
XRCC3-208ENST00000554811 GPR183P32249 361 aa9.42□□□□□ -0.9
XRCC3-208ENST00000554811 TRGV9Q99603 122 aa9.42□□□□□ -0.9
XRCC3-208ENST00000554811 CKS2P33552 79 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 IFI27P40305 119 aaPredicted RBP9.41□□□□□ -0.9
XRCC3-208ENST00000554811 OR4A5Q8NH83 315 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 MBD6Q96DN6 1003 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 FBLL1A6NHQ2 334 aaKnown RBP9.41□□□□□ -0.9
XRCC3-208ENST00000554811 SHISA9B4DS77 424 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 TOMM40O96008 361 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 FAM106CPP0CH98 169 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 GP9P14770 177 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 PAX1P15863 534 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 FCER1GP30273 86 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 FAM106AQ4KMX7 169 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 SPRY2O43597 315 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 LIPFP07098 398 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 LYZL1Q6UWQ5 148 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 OTORQ9NRC9 128 aa9.41□□□□□ -0.9
XRCC3-208ENST00000554811 IGKV1-17P01599 117 aa9.4□□□□□ -0.9
XRCC3-208ENST00000554811 B9A039 149 aa9.4□□□□□ -0.9
XRCC3-208ENST00000554811 TMEM30BQ3MIR4 351 aa9.4□□□□□ -0.9
XRCC3-208ENST00000554811 MRPL27Q9P0M9 148 aaKnown RBP9.4□□□□□ -0.9
XRCC3-208ENST00000554811 DPM3Q9P2X0 92 aa9.4□□□□□ -0.9
XRCC3-208ENST00000554811 CCL25O15444 150 aa9.4□□□□□ -0.91
XRCC3-208ENST00000554811 NBR2O15453 112 aa9.4□□□□□ -0.91
XRCC3-208ENST00000554811 BMI1P35226 326 aa9.4□□□□□ -0.91
XRCC3-208ENST00000554811 CACNG7P62955 275 aa9.4□□□□□ -0.91
XRCC3-208ENST00000554811 THAP8Q8NA92 274 aa9.4□□□□□ -0.91
XRCC3-208ENST00000554811 KLK15Q9H2R5 256 aa9.4□□□□□ -0.91
XRCC3-208ENST00000554811 CEACAM4O75871 244 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms