RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ETFRF1Q6IPR1 90 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 ZNF738Q8NE65 137 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 IL22RA2Q969J5 263 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 DIRAS2Q96HU8 199 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 LINC01587Q99440 93 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 RPRMQ9NS64 109 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 U3KQ87 197 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 TRAV26-1A0A087WT03 109 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 A0A0B4J2A0 478 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 ANKRD20A5PA0PJZ0 165 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 PRSS46E5RG02 174 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 PITX3O75364 302 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 ADAP1O75689 374 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 GAGE7O76087 117 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 INSP01308 110 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 GAGE12FP0CL80 117 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 GAGE12GP0CL81 117 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 GAGE12IP0CL82 117 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 GPX4P36969 197 aaPredicted RBP4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 ESRGQ1W209 222 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 SOHLH1Q5JUK2 328 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 MORN5Q5VZ52 161 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 OR8G2PQ6IF36 304 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 PATE2Q6UY27 113 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 ACOT7LQ6ZUV0 252 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 THAP8Q8NA92 274 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 TRGV9Q99603 122 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 ZNF586Q9NXT0 402 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 SHPKQ9UHJ6 478 aa4.74□□□□□ -1.65
PRPF40B-214ENST00000551320 A0A096LPF7 62 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 LINC00854A0A1B0GVQ3 168 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 A8MTW9 85 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 SLC17A3O00476 420 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 OR5G3P0C626 314 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 TNFSF8P32971 234 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 GALR1P47211 349 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 POLR2GP62487 172 aaKnown RBP eCLIP4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 AKR1C1Q04828 323 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 PPP1R1AQ13522 171 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 CLINT1Q14677 625 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 Q6ZQT7 251 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 Q8N1X5 172 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 AP3S1Q92572 193 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 PRRT1Q99946 306 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 Q9H8V8 135 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 SEPSECSQ9HD40 501 aaKnown RBP4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 FLVCR2Q9UPI3 526 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 KCNIP3Q9Y2W7 256 aa4.73□□□□□ -1.65
PRPF40B-214ENST00000551320 TRGV11A0A075B6L2 103 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 TRAV5A0A0B4J249 113 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 F5H697 171 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 H3BRN7 92 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 BOLA2-SMG1P6H3BVE0 249 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 ZNF701M0R085 212 aaPredicted RBP4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 B3GALNT1O75752 331 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 CDK2AP2O75956 126 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 SMR3BP02814 79 aaPredicted RBP4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 ATP5G1P05496 136 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 DNAH10OSP0CZ25 163 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 CXCL3P19876 107 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 ATP5G3P48201 142 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 UBE2MP61081 183 aaKnown RBP4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 SLC38A11Q08AI6 406 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 ARL16Q0P5N6 197 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 OXA1LQ15070 435 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 SURF2Q15527 256 aaPredicted RBP4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 C1orf194Q5T5A4 169 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 GGNBP1Q5YKI7 109 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 CYP2G1PQ6ZSU1 146 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 OR8A1Q8NGG7 326 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 FAM210BQ96KR6 192 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 MLST8Q9BVC4 326 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 TMEM147Q9BVK8 224 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 ARL6Q9H0F7 186 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 TMPRSS5Q9H3S3 457 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 PPP1R14DQ9NXH3 145 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 MDFICQ9P1T7 246 aa4.72□□□□□ -1.65
PRPF40B-214ENST00000551320 TRAV12-3A0A0B4J271 114 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 CBY3A6NI87 242 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 PMS2P5A8MQ11 134 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 LYRM9A8MSI8 78 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 SYNGR2O43760 224 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 SSSCA1O60232 199 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 IGHV3-53P01767 116 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 IL5P05113 134 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 METTL15P1P0C7V9 234 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 LINC00869P0C866 280 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 ANXA7P20073 488 aaKnown RBP4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 ALDH3B2P48448 385 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 CCL18P55774 89 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 RAB11AP62491 216 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 ERCC8Q13216 396 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 PSG3Q16557 428 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 PYDC2Q56P42 97 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 Q6ZTI0 123 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 CCDC190Q86UF4 302 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 NOXA1Q86UR1 476 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 C15orf53Q8NAA6 179 aa4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 ZBTB8BQ8NAP8 495 aaPredicted RBP4.71□□□□□ -1.66
PRPF40B-214ENST00000551320 BPIFCQ8NFQ6 507 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms