RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 ARL3P36405 182 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 FGF8P55075 233 aaPredicted RBP4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 LYZP61626 148 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 PEA15Q15121 130 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 GUK1Q16774 197 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 KHDC3LQ587J8 217 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 TOMM20LQ6UXN7 152 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 MIR17HGQ75NE6 70 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 GPHB5Q86YW7 130 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 SUN5Q8TC36 379 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 FAM167A-AS1Q96KT0 104 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 UHRF2Q96PU4 802 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 TXNDC17Q9BRA2 123 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 SHANK2-AS3Q9BTD1 123 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 SLC25A39Q9BZJ4 359 aaPredicted RBP4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 EIF5A2Q9GZV4 153 aaKnown RBP4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 GNB4Q9HAV0 340 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 MANBALQ9NQG1 85 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 TMEM167BQ9NRX6 74 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 RABAC1Q9UI14 185 aa4.7□□□□□ -1.66
DEPDC4-209ENST00000550587 TRAV5A0A0B4J249 113 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 ZNF98A6NK75 572 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 I3L521 148 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 K7EMT4 169 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 OR7C2O60412 319 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 ATP6V1G1O75348 118 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 EIF3GO75821 320 aaKnown RBP eCLIP4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 IFNA1P01562 189 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 TRBV12-3P01733 135 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 HSPB1P04792 205 aaKnown RBP4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 LGALS1P09382 135 aaKnown RBP4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 S100A1P23297 94 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 NPPCP23582 126 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 CRYBB3P26998 211 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 HOXD3P31249 432 aaPredicted RBP4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 MYCNOSP40205 109 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 EGFEM1PQ0D2K5 195 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 USF2Q15853 346 aaPredicted RBP4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 FAM106AQ4KMX7 169 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 TM4SF20Q53R12 229 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 TCTEX1D4Q5JR98 221 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 ZNF506Q5JVG8 444 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 MORN5Q5VZ52 161 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 BPIFA4PQ86YQ2 179 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 RARRES2Q99969 163 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 PAXXQ9BUH6 204 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 SLC25A2Q9BXI2 301 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 NKX6-2Q9C056 277 aaPredicted RBP4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 OR51M1Q9H341 326 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 TMEM14CQ9P0S9 112 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 GNG13Q9P2W3 67 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 VAX2Q9UIW0 290 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 ARL2-SNX15V9GYD0 113 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 NOTCH3Q9UM47 2321 aa4.69□□□□□ -1.66
DEPDC4-209ENST00000550587 IGHV3-35A0A0C4DH35 117 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 LOC102723971A0A1B0GUV8 181 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 A0A1W2PRE2 83 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 KRBOX1C9JBD0 128 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 C3orf84H3BNL1 204 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 H3BRN7 92 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 BUB3O43684 328 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 NBEAP1P0C6P0 100 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 HIST1H1EP10412 219 aaKnown RBP4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 BCL2P10415 239 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 MEF2BQ02080 365 aaPredicted RBP4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 HAGHQ16775 308 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 TOR2AQ5JU69 321 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 C1orf194Q5T5A4 169 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 IQCF2Q8IXL9 164 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 FXYD5Q96DB9 178 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 GPR82Q96P67 336 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 OR5B12Q96R08 314 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 METTL26Q96S19 204 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 SLC35B3Q9H1N7 401 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 TREM1Q9NP99 234 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 U3KQK5 164 aa4.68□□□□□ -1.66
DEPDC4-209ENST00000550587 BIRC6Q9NR09 4857 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 ZNF320A2RRD8 509 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 TMEM218A2RU14 115 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 FAM74A7A6NL05 159 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 C9JQL5 133 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 TMEM250H0YL14 139 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 LGALS9O00182 355 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 PAGE4O60829 102 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 SRP19P09132 144 aaKnown RBP4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 OR10J4P0C629 311 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 PYYP10082 97 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 GP9P14770 177 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 RPL7P18124 248 aaKnown RBP4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 ZP3P21754 424 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 CD81P60033 236 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 KRTAP10-11P60412 298 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 SUMO1P63165 101 aaKnown RBP4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 KLF5Q13887 457 aaPredicted RBP4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 RPEL1Q2QD12 228 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 C9orf66Q5T8R8 295 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 CST9LP1Q5W188 147 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 LEMD1Q68G75 181 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 UNQ9165/PRO28630Q6UXU0 137 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 672.2 ms