RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 HSBP1O75506 76 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 FOXH1O75593 365 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 CXorf1O96002 111 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 FXYD3Q14802 87 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 MIR17HGQ75NE6 70 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 C18orf32Q8TCD1 76 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 SRSF12Q8WXF0 261 aaKnown RBP6.53□□□□□ -1.36
SOX6-210ENST00000528252 SIRPDQ9H106 197 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 V9GYV3 84 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 IGHV3-21A0A0B4J1V1 117 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 TEX22C9J3V5 150 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 CNIH1O95406 144 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 MOSP00540 346 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 SCGB1A1P11684 91 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 HOXB4P17483 251 aaPredicted RBP6.53□□□□□ -1.36
SOX6-210ENST00000528252 CKS1BP61024 79 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 PRR31Q5SQ13 230 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 RUSC1-AS1Q66K80 236 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 RNASEKQ6P5S7 137 aaKnown RBP6.53□□□□□ -1.36
SOX6-210ENST00000528252 SIGMAR1Q99720 223 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 ST20Q9HBF5 79 aa6.53□□□□□ -1.36
SOX6-210ENST00000528252 USP9YO00507 2555 aaPredicted RBP6.52□□□□□ -1.37
SOX6-210ENST00000528252 SH2D7A6NKC9 451 aaPredicted RBP6.52□□□□□ -1.37
SOX6-210ENST00000528252 ZNF207O43670 478 aaKnown RBP6.52□□□□□ -1.37
SOX6-210ENST00000528252 MT-ND6P03923 174 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 GCHFRP30047 84 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 PLP1P60201 277 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 SLAQ13239 276 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 GTF2H5Q6ZYL4 71 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 CCL19Q99731 98 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 SLC25A33Q9BSK2 321 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 POLQO75417 2590 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 K7EP34 96 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 NBR2O15453 112 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 SNAI2O43623 268 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 CX3CL1P78423 397 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 MCRIP2Q9BUT9 160 aaKnown RBP6.52□□□□□ -1.37
SOX6-210ENST00000528252 NPFFR1Q9GZQ6 430 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 RNASE7Q9H1E1 156 aaKnown RBP6.52□□□□□ -1.37
SOX6-210ENST00000528252 TECRQ9NZ01 308 aaKnown RBP6.52□□□□□ -1.37
SOX6-210ENST00000528252 PTPN13Q12923 2485 aa6.52□□□□□ -1.37
SOX6-210ENST00000528252 IGKV1D-37A0A075B6S9 117 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 H3BUT2 72 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 APCSP02743 223 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 RPL24P83731 157 aaKnown RBP6.51□□□□□ -1.37
SOX6-210ENST00000528252 PSG3Q16557 428 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 ASPHD1Q5U4P2 390 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 CCDC144NLQ6NUI1 221 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 LINC00173Q6ZV60 143 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 PERPQ96FX8 193 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 YTHDF2Q9Y5A9 579 aaKnown RBP6.51□□□□□ -1.37
SOX6-210ENST00000528252 F11RQ9Y624 299 aaKnown RBP6.51□□□□□ -1.37
SOX6-210ENST00000528252 TEX48A0A1B0GUV7 120 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 AMY1AP04745 511 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 CRYGCP07315 174 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 MGST1P10620 155 aaKnown RBP6.51□□□□□ -1.37
SOX6-210ENST00000528252 MINOS1Q5TGZ0 78 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 PVRIGQ6DKI7 326 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 MINOS1-NBL1R4GNA1 71 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 CSMD1Q96PZ7 3565 aa6.51□□□□□ -1.37
SOX6-210ENST00000528252 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.5□□□□□ -1.37
SOX6-210ENST00000528252 TCRBV4S1A1TA0A5B7 111 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 NCBP2LA6PVI3 153 aaKnown RBP6.5□□□□□ -1.37
SOX6-210ENST00000528252 NDUFA3O95167 84 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 GPR183P32249 361 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 C5orf64Q2M2E5 130 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 MORN5Q5VZ52 161 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 THAP8Q8NA92 274 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 NPBQ8NG41 125 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 FAM168AQ92567 244 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 AP1S3Q96PC3 154 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 TMEM70Q9BUB7 260 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 SCRT2Q9NQ03 307 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 TSSC4Q9Y5U2 329 aaPredicted RBP6.5□□□□□ -1.37
SOX6-210ENST00000528252 CELSR2Q9HCU4 2923 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.5□□□□□ -1.37
SOX6-210ENST00000528252 TRAV5A0A0B4J249 113 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 IGHV4-61A0A0C4DH41 118 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 OOSP1A8MZH6 123 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 CRYBB3P26998 211 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 UBE2E1P51965 193 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 ATP5J2P56134 94 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 HIST1H1AQ02539 215 aaPredicted RBP6.5□□□□□ -1.37
SOX6-210ENST00000528252 HSD52Q0P140 79 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 ZNF843Q8N446 348 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 ZNF503Q96F45 646 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 C19orf24Q9BVV8 132 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 TNFRSF19Q9NS68 423 aa6.5□□□□□ -1.37
SOX6-210ENST00000528252 ABCA2Q9BZC7 2435 aa6.49□□□□□ -1.37
SOX6-210ENST00000528252 PSMB11A5LHX3 300 aa6.49□□□□□ -1.37
SOX6-210ENST00000528252 C9orf118A6NHY6 69 aa6.49□□□□□ -1.37
SOX6-210ENST00000528252 COX7A2P2O60397 106 aa6.49□□□□□ -1.37
SOX6-210ENST00000528252 CA1P00915 261 aaPredicted RBP6.49□□□□□ -1.37
SOX6-210ENST00000528252 HLA-DQA1P01909 254 aa6.49□□□□□ -1.37
SOX6-210ENST00000528252 OR10J4P0C629 311 aa6.49□□□□□ -1.37
SOX6-210ENST00000528252 SAA4P35542 130 aa6.49□□□□□ -1.37
SOX6-210ENST00000528252 FAM120AOSQ5T036 256 aa6.49□□□□□ -1.37
SOX6-210ENST00000528252 PATE2Q6UY27 113 aa6.49□□□□□ -1.37
SOX6-210ENST00000528252 C2orf91Q6ZV80 131 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms