RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 OR10J1P30954 320 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 APOC4P55056 127 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 SRPXP78539 464 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 PPP1R1AQ13522 171 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 TMEM88Q6PEY1 159 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 ACOT7LQ6ZUV0 252 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 LINC01551Q86U37 167 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 FAM24BQ8N5W8 94 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 STPG3Q8N7X2 389 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 OR1S2Q8NGQ3 325 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 OR1S1Q8NH92 325 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 RNF183Q96D59 192 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 METTL26Q96S19 204 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 TP53TG1Q9Y2A0 90 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 TRAV2A0A0B4J234 112 aa6.87□□□□□ -1.31
HDAC3-215ENST00000519474 DUXBA0A1W2PPF3 345 aa6.87□□□□□ -1.31
HDAC3-215ENST00000519474 K7EQG2 157 aa6.87□□□□□ -1.31
HDAC3-215ENST00000519474 RD3LP0DJH9 198 aa6.87□□□□□ -1.31
HDAC3-215ENST00000519474 PSG1P11464 419 aa6.87□□□□□ -1.31
HDAC3-215ENST00000519474 DEFB131AP59861 70 aa6.87□□□□□ -1.31
HDAC3-215ENST00000519474 RPL11P62913 178 aaKnown RBP6.87□□□□□ -1.31
HDAC3-215ENST00000519474 EWSR1Q01844 656 aaKnown RBP eCLIP6.87□□□□□ -1.31
HDAC3-215ENST00000519474 BOD1L2Q8IYS8 172 aa6.87□□□□□ -1.31
HDAC3-215ENST00000519474 IL17DQ8TAD2 202 aa6.87□□□□□ -1.31
HDAC3-215ENST00000519474 ACY3Q96HD9 319 aa6.87□□□□□ -1.31
HDAC3-215ENST00000519474 SNHG12Q9BXW3 62 aa6.87□□□□□ -1.31
HDAC3-215ENST00000519474 TMEM231Q9H6L2 316 aa6.87□□□□□ -1.31
HDAC3-215ENST00000519474 TMED3Q9Y3Q3 217 aa6.87□□□□□ -1.31
HDAC3-215ENST00000519474 KMT2CQ8NEZ4 4911 aaKnown RBP6.87□□□□□ -1.31
HDAC3-215ENST00000519474 IGKV1D-37A0A075B6S9 117 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 TGIF2-C20orf24A0A0A6YYL0 155 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 PIGBOS1A0A0B4J2F0 54 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 CXorf65A6NEN9 183 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 NAP1L6A6NFF2 107 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 PLA2G10O15496 165 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 NDUFB6O95139 128 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 TOMM40O96008 361 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 APOC3P02656 99 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 P2RY1P47900 373 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 RRAS2P62070 204 aaPredicted RBP6.86□□□□□ -1.31
HDAC3-215ENST00000519474 EIF5AP63241 154 aaKnown RBP6.86□□□□□ -1.31
HDAC3-215ENST00000519474 ID3Q02535 119 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 UBE2V1Q13404 147 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 DEFB135Q30KP9 77 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 SAMD13Q5VXD3 122 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 GGNBP1Q5YKI7 109 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 ZNF431Q8TF32 576 aaPredicted RBP6.86□□□□□ -1.31
HDAC3-215ENST00000519474 DCANP1Q8TF63 244 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 RSG1Q9BU20 258 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 MAGT1Q9H0U3 335 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 DNAJC4Q9NNZ3 241 aa6.86□□□□□ -1.31
HDAC3-215ENST00000519474 A0A0J9YWU9 116 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 LCE6AA0A183 80 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 FAM90A26D6RGX4 464 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 SNAI2O43623 268 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 BUB3O43684 328 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 SYNGR2O43760 224 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 IL4P05112 153 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 IAPPP10997 89 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 BTCP35070 178 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 UBE2MP61081 183 aaKnown RBP6.85□□□□□ -1.31
HDAC3-215ENST00000519474 ZNF90Q03938 601 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 GCSAMLQ5JQS6 135 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 FAM74A1Q5RGS3 127 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 C10orf91Q5T1B1 145 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 RABAC1Q9UI14 185 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 STAB2Q8WWQ8 2551 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 TENM2Q9NT68 2774 aa6.85□□□□□ -1.31
HDAC3-215ENST00000519474 NBEAL2Q6ZNJ1 2754 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 IGKV1OR2-108A0A075B7D4 117 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 TRAV26-1A0A087WT03 109 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 PRSS46E5RG02 174 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 F6UZH7 168 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 EREGO14944 169 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 MT-ND4LP03901 98 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 GIG44P09565 113 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-215ENST00000519474 ID1P41134 155 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 INPP1P49441 399 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 TMEM241Q24JQ0 296 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 AKR1C8PQ5T2L2 129 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 OR51G1Q8NGK1 321 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 RXFP4Q8TDU9 374 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 PTH2Q96A98 100 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 RPUSD4Q96CM3 377 aaKnown RBP6.84□□□□□ -1.31
HDAC3-215ENST00000519474 GRAMD2BQ96HH9 432 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 ATG101Q9BSB4 218 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 WFDC1Q9HC57 220 aa6.84□□□□□ -1.31
HDAC3-215ENST00000519474 CARHSP1Q9Y2V2 147 aaKnown RBP6.84□□□□□ -1.31
HDAC3-215ENST00000519474 AGRNO00468 2067 aa6.83□□□□□ -1.32
HDAC3-215ENST00000519474 KNCNA6PVL3 124 aa6.83□□□□□ -1.32
HDAC3-215ENST00000519474 SSNA1O43805 119 aa6.83□□□□□ -1.32
HDAC3-215ENST00000519474 PAX9P55771 341 aa6.83□□□□□ -1.32
HDAC3-215ENST00000519474 ERVFC1-1P60608 527 aa6.83□□□□□ -1.32
HDAC3-215ENST00000519474 DHRS2Q13268 280 aa6.83□□□□□ -1.32
HDAC3-215ENST00000519474 PEA15Q15121 130 aa6.83□□□□□ -1.32
HDAC3-215ENST00000519474 OCIAD2Q56VL3 154 aa6.83□□□□□ -1.32
HDAC3-215ENST00000519474 COL5A1-AS1Q5SY13 56 aa6.83□□□□□ -1.32
HDAC3-215ENST00000519474 TMEM182Q6ZP80 229 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-215ENST00000519474 OR4D5Q8NGN0 318 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms