RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 PRCDQ00LT1 54 aa10.01□□□□□ -0.81
PCDHGA6-201ENST00000517434 LINC01587Q99440 93 aa10.01□□□□□ -0.81
PCDHGA6-201ENST00000517434 TOMM7Q9P0U1 55 aa10.01□□□□□ -0.81
PCDHGA6-201ENST00000517434 KIF26BQ2KJY2 2108 aa10.01□□□□□ -0.81
PCDHGA6-201ENST00000517434 LSM4Q9Y4Z0 139 aaKnown RBP10.01□□□□□ -0.81
PCDHGA6-201ENST00000517434 H3BUX3 64 aa10.01□□□□□ -0.81
PCDHGA6-201ENST00000517434 MCRIP2Q9BUT9 160 aaKnown RBP10.01□□□□□ -0.81
PCDHGA6-201ENST00000517434 SLC25A20O43772 301 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 CLPSP04118 112 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 SPATA31B1PQ5VZV4 182 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 RNASE8Q8TDE3 154 aaKnown RBP10□□□□□ -0.81
PCDHGA6-201ENST00000517434 BPESC1Q9GZL8 116 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 ZNF319Q9P2F9 582 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 SCN8AQ9UQD0 1980 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 CT83Q5H943 113 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 CITED2Q99967 270 aaPredicted RBP10□□□□□ -0.81
PCDHGA6-201ENST00000517434 H3BMM0 161 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 WISP1O95388 367 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 NCR2O95944 276 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 ZNF138P52744 262 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 PAX8Q06710 450 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 UBE2WQ96B02 151 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 SS18L2Q9UHA2 77 aa10□□□□□ -0.81
PCDHGA6-201ENST00000517434 MDC1Q14676 2089 aaKnown RBP10□□□□□ -0.81
PCDHGA6-201ENST00000517434 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 COA6Q5JTJ3 125 aaKnown RBP9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 C1QTNF4Q9BXJ3 329 aa9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 MKI67P46013 3256 aaKnown RBP9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 IGHV3OR16-13A0A075B7E8 117 aa9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 IGHV3-74A0A0B4J1X5 117 aa9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 RNF223E7ERA6 249 aa9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 FCN3O75636 299 aa9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 SMIM20Q8N5G0 67 aa9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 MBNL3Q9NUK0 354 aaKnown RBP9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 NPIPB5A8MRT5 1133 aa9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 E7EQL1 145 aa9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 CDPF1Q6NVV7 123 aa9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 FOXL2NBQ6ZUU3 175 aa9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 SLC25A39Q9BZJ4 359 aaPredicted RBP9.99□□□□□ -0.81
PCDHGA6-201ENST00000517434 IGKV1-5P01602 117 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 DUTP33316 252 aaKnown RBP9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 OVOL2Q9BRP0 275 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 ANAPC1Q9H1A4 1944 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 SAP30O75446 220 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 IGKV3-20P01619 116 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 TCRAP04437 139 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 RNF125Q96EQ8 232 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 LYZL4Q96KX0 146 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 VGLL1Q99990 258 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 IGHV1-24A0A0C4DH33 117 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 IGLC7A0M8Q6 106 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 ETV2O00321 342 aaPredicted RBP9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 FOXG1P55316 489 aaPredicted RBP9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 TMEM200BQ69YZ2 307 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 FGFBP3Q8TAT2 258 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 FRMPD3Q5JV73 1810 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 DOCK9Q9BZ29 2069 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 LAMA3Q16787 3333 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 TRAV8-3A0A0A6YYJ7 113 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 OVOL1O14753 267 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 LYZL1Q6UWQ5 148 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 SCRT1Q9BWW7 348 aa9.98□□□□□ -0.81
PCDHGA6-201ENST00000517434 TRACP01848 142 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 INAFM2P0DMQ5 153 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 PRR30Q53SZ7 412 aaPredicted RBP9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 TMEM158Q8WZ71 300 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 Q96MF0 132 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 DOCK8Q8NF50 2099 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 DOPEY2Q9Y3R5 2298 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 DEFB125Q8N687 156 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 SRSF8Q9BRL6 282 aaKnown RBP9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 TANC1Q9C0D5 1861 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 E9PQ18 207 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 ZNF688P0C7X2 276 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 PPIFP30405 207 aaKnown RBP9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 COL4A4P53420 1690 aaPredicted RBP9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 TRGV11A0A075B6L2 103 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 CD28P10747 220 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 UBE2E1P51965 193 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 GFRA4Q9GZZ7 299 aa9.97□□□□□ -0.81
PCDHGA6-201ENST00000517434 GBF1Q92538 1859 aa9.96□□□□□ -0.81
PCDHGA6-201ENST00000517434 NOTCH4Q99466 2003 aa9.96□□□□□ -0.81
PCDHGA6-201ENST00000517434 TRBV7-1A0A0A6YYK4 115 aa9.96□□□□□ -0.81
PCDHGA6-201ENST00000517434 IGHV1-3A0A0C4DH29 117 aa9.96□□□□□ -0.81
PCDHGA6-201ENST00000517434 C5orf64Q2M2E5 130 aa9.96□□□□□ -0.82
PCDHGA6-201ENST00000517434 FAM223BA6NKX1 122 aa9.96□□□□□ -0.82
PCDHGA6-201ENST00000517434 FXYD7P58549 80 aa9.96□□□□□ -0.82
PCDHGA6-201ENST00000517434 PMVKQ15126 192 aa9.96□□□□□ -0.82
PCDHGA6-201ENST00000517434 FAM223AQ8IWN6 122 aa9.96□□□□□ -0.82
PCDHGA6-201ENST00000517434 BOD1L2Q8IYS8 172 aa9.96□□□□□ -0.82
PCDHGA6-201ENST00000517434 IGHV3-23P01764 117 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 ROS1P08922 2347 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 HEATR1Q9H583 2144 aaKnown RBP9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 IGHV3-49A0A0A0MS15 119 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 IGKV1-12A0A0C4DH73 117 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 IGKV1D-12P01611 117 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 DEFB121Q5J5C9 76 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 MED12Q93074 2177 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 SIVA1O15304 175 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 HTN3P15516 51 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms