RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 OCIAD2Q56VL3 154 aa9.96□□□□□ -0.82
LIN54-210ENST00000510877 KLF17Q5JT82 389 aaPredicted RBP9.96□□□□□ -0.82
LIN54-210ENST00000510877 LINC00311Q8N616 119 aa9.96□□□□□ -0.82
LIN54-210ENST00000510877 CITED1Q99966 193 aa9.96□□□□□ -0.82
LIN54-210ENST00000510877 A0A1B0GW64 132 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 APOC4P55056 127 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 UNC119Q13432 240 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 ZNF841Q6ZN19 808 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 J3KRW8 73 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 PGLYRP1O75594 196 aaPredicted RBP9.95□□□□□ -0.82
LIN54-210ENST00000510877 IGFBP3P17936 291 aaPredicted RBP9.95□□□□□ -0.82
LIN54-210ENST00000510877 S100A4P26447 101 aaKnown RBP9.95□□□□□ -0.82
LIN54-210ENST00000510877 SELENOTP62341 195 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 HIST1H1AQ02539 215 aaPredicted RBP9.95□□□□□ -0.82
LIN54-210ENST00000510877 ATOH7Q8N100 152 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 RNASEH2CQ8TDP1 164 aaKnown RBP9.95□□□□□ -0.82
LIN54-210ENST00000510877 KCNS1Q96KK3 526 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 IGHV3-66A0A0C4DH42 116 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.95□□□□□ -0.82
LIN54-210ENST00000510877 LDLRAD4O15165 306 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 CDKN1BP46527 198 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 PAX2Q02962 417 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 IBA57Q5T440 356 aaKnown RBP9.95□□□□□ -0.82
LIN54-210ENST00000510877 C10orf126Q8N4M7 172 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 C20orf144Q9BQM9 153 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 ST20Q9HBF5 79 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 NRN1Q9NPD7 142 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 TRBV6-7A0A0A0MS04 114 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 A6NDX4 124 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 SRSF4Q08170 494 aaKnown RBP9.95□□□□□ -0.82
LIN54-210ENST00000510877 HIST1H4GQ99525 98 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 AURKAIP1Q9NWT8 199 aaPredicted RBP9.95□□□□□ -0.82
LIN54-210ENST00000510877 FRYLO94915 3013 aa9.95□□□□□ -0.82
LIN54-210ENST00000510877 H3BUT2 72 aa9.94□□□□□ -0.82
LIN54-210ENST00000510877 C17orf58Q2M2W7 97 aa9.94□□□□□ -0.82
LIN54-210ENST00000510877 AP5S1Q9NUS5 200 aa9.94□□□□□ -0.82
LIN54-210ENST00000510877 SELENOKQ9Y6D0 94 aa9.94□□□□□ -0.82
LIN54-210ENST00000510877 SRSF3P84103 164 aaKnown RBP9.94□□□□□ -0.82
LIN54-210ENST00000510877 SNHG12Q9BXW3 62 aa9.94□□□□□ -0.82
LIN54-210ENST00000510877 TMEM56-RWDD3S4R434 201 aa9.94□□□□□ -0.82
LIN54-210ENST00000510877 C7orf71A4D174 169 aa9.94□□□□□ -0.82
LIN54-210ENST00000510877 GZMBP10144 247 aa9.94□□□□□ -0.82
LIN54-210ENST00000510877 FCGR2BP31994 310 aaPredicted RBP9.94□□□□□ -0.82
LIN54-210ENST00000510877 DUTP33316 252 aaKnown RBP9.94□□□□□ -0.82
LIN54-210ENST00000510877 IL36BQ9NZH7 164 aa9.94□□□□□ -0.82
LIN54-210ENST00000510877 ORM1P02763 201 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 AMMECR1LQ6DCA0 310 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 SPSB3Q6PJ21 355 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 SH3BGRL3Q9H299 93 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 C5orf66Q9H5L9 145 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 FAM90A26D6RGX4 464 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 CBLN1P23435 193 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 NR2C2APQ86WQ0 139 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 C5orf17Q8NAS9 161 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 TMEM222Q9H0R3 208 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 COX11Q9Y6N1 276 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 VPS13AQ96RL7 3174 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 TRBV7-1A0A0A6YYK4 115 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 RBFOX2O43251 390 aaKnown RBP eCLIP9.93□□□□□ -0.82
LIN54-210ENST00000510877 SCGB1A1P11684 91 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 TWIST1Q15672 202 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 OXLD1Q5BKU9 147 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 C10orf55Q5SWW7 151 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 TTC9CQ8N5M4 171 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 LY6G5BQ8NDX9 201 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 CST9LQ9H4G1 147 aa9.93□□□□□ -0.82
LIN54-210ENST00000510877 ZFAND6Q6FIF0 208 aa9.92□□□□□ -0.82
LIN54-210ENST00000510877 TNCP24821 2201 aa9.92□□□□□ -0.82
LIN54-210ENST00000510877 SHISA3A0PJX4 238 aa9.92□□□□□ -0.82
LIN54-210ENST00000510877 SERF1AO75920 110 aa9.92□□□□□ -0.82
LIN54-210ENST00000510877 LGALS1P09382 135 aaKnown RBP9.92□□□□□ -0.82
LIN54-210ENST00000510877 GFI1BQ5VTD9 330 aa9.92□□□□□ -0.82
LIN54-210ENST00000510877 OR10J6PQ8NGY7 276 aa9.92□□□□□ -0.82
LIN54-210ENST00000510877 TSPOP30536 169 aa9.92□□□□□ -0.82
LIN54-210ENST00000510877 TCTEX1D4Q5JR98 221 aa9.92□□□□□ -0.82
LIN54-210ENST00000510877 PRR25Q96S07 402 aa9.92□□□□□ -0.82
LIN54-210ENST00000510877 GAGE12BA1L429 117 aa9.92□□□□□ -0.82
LIN54-210ENST00000510877 UPK2O00526 184 aa9.92□□□□□ -0.82
LIN54-210ENST00000510877 MRPS16Q9Y3D3 137 aaKnown RBP9.92□□□□□ -0.82
LIN54-210ENST00000510877 NPSP0C0P6 89 aa9.91□□□□□ -0.82
LIN54-210ENST00000510877 HYPMO75409 117 aa9.91□□□□□ -0.82
LIN54-210ENST00000510877 LY6G6FQ5SQ64 297 aa9.91□□□□□ -0.82
LIN54-210ENST00000510877 UBE2E2Q96LR5 201 aa9.91□□□□□ -0.82
LIN54-210ENST00000510877 MS4A6AQ9H2W1 248 aa9.91□□□□□ -0.82
LIN54-210ENST00000510877 PQLC2Q6ZP29 291 aa9.91□□□□□ -0.82
LIN54-210ENST00000510877 TCF24Q7RTU0 167 aa9.91□□□□□ -0.82
LIN54-210ENST00000510877 OR13C6PQ8NH95 151 aa9.91□□□□□ -0.82
LIN54-210ENST00000510877 FLNCQ14315 2725 aa9.9□□□□□ -0.82
LIN54-210ENST00000510877 GAGE2BQ13066 116 aa9.9□□□□□ -0.82
LIN54-210ENST00000510877 GAGE2EQ4V326 116 aa9.9□□□□□ -0.82
LIN54-210ENST00000510877 ZNF818PQ6ZRF7 136 aa9.9□□□□□ -0.82
LIN54-210ENST00000510877 C1QTNF4Q9BXJ3 329 aa9.9□□□□□ -0.82
LIN54-210ENST00000510877 FNDC4Q9H6D8 234 aaPredicted RBP9.9□□□□□ -0.82
LIN54-210ENST00000510877 GAGE2DQ9UEU5 116 aa9.9□□□□□ -0.82
LIN54-210ENST00000510877 HIGD1AQ9Y241 93 aa9.9□□□□□ -0.82
LIN54-210ENST00000510877 TMEM89A2RUT3 159 aa9.9□□□□□ -0.82
LIN54-210ENST00000510877 CYSRT1A8MQ03 144 aa9.9□□□□□ -0.82
LIN54-210ENST00000510877 SMIM17P0DL12 118 aa9.9□□□□□ -0.82
LIN54-210ENST00000510877 TEPPQ6URK8 271 aa9.9□□□□□ -0.82
LIN54-210ENST00000510877 RPRMQ9NS64 109 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms