RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 RNF24Q9Y225 148 aa3.4□□□□□ -1.87
UBE2D3-230ENST00000510599 ZZEF1O43149 2961 aa3.4□□□□□ -1.87
UBE2D3-230ENST00000510599 ITPR1Q14643 2758 aa3.4□□□□□ -1.87
UBE2D3-230ENST00000510599 SPTBN2O15020 2390 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 COL6A6A6NMZ7 2263 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 TRBV9A0A0B4J1U6 114 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 TRBV6-1A0A0K0K1D8 114 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 A0A0U1RQK1 487 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 A0A1W2PPQ1 181 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 WI2-2373I1.2A0A1W2PRP0 233 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 ZNF320A2RRD8 509 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 PGPEP1LA6NFU8 196 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 K7EN84 100 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 PEX7O00628 323 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 NPFFO15130 113 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 SCGB2A1O75556 95 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 IGLV2-8P01709 118 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 IGHV3-48P01763 117 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 IGHV4-39P01824 125 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 HLA-DRB1P01911 266 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 NBEAP1P0C6P0 100 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 RD3LP0DJH9 198 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 PYYP10082 97 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 HIST1H1EP10412 219 aaKnown RBP3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 GP9P14770 177 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 TMEM11P17152 192 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 ORM2P19652 201 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 CNN1P51911 297 aaKnown RBP3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 MFAP4P55083 255 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 NDUFA6P56556 154 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 KRTAP10-3P60369 221 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 CX3CL1P78423 397 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 PRB3Q04118 309 aaPredicted RBP3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 HES1Q14469 280 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 TMEM183BQ1AE95 376 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 RPEL1Q2QD12 228 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 DYNAPQ8N1N2 210 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 LYPD1Q8N2G4 141 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 ZNF491Q8N8L2 437 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 Q8N9W7 124 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 NECAP1Q8NC96 275 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 OR1B1Q8NGR6 318 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 SGMS2Q8NHU3 365 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 VN1R17PQ8TDU5 208 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 ARPC1AQ92747 370 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 RBM14Q96PK6 669 aaKnown RBP3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 ATP6V0BQ99437 205 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 C12orf57Q99622 126 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 BPESC1Q9GZL8 116 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 HIGD1AQ9Y241 93 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 KLF12Q9Y4X4 402 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 V9GYV3 84 aa3.39□□□□□ -1.87
UBE2D3-230ENST00000510599 IGF2RP11717 2491 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 MAP1BP46821 2468 aaKnown RBP3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 IGHV7-81A0A0B4J1V7 117 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 CENPVL3A0A0U1RRI6 287 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 A0A1W2PRD5 423 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 A0A1W2PRF3 423 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 A0A1W2PRM7 423 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 SMIM27A0A1W2PRY6 76 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 PGPA6NDG6 321 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 NCBP2LA6PVI3 153 aaKnown RBP3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 H3BRN7 92 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 GNG7O60262 68 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 BRI3O95415 125 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 IGKV1-17P01599 117 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 S100A2P29034 98 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 DNLZQ5SXM8 178 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 IBA57Q5T440 356 aaKnown RBP3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 WDR73Q6P4I2 378 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 RASL11AQ6T310 242 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 CLEC2AQ6UVW9 174 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 ZNF600Q6ZNG1 722 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 TMEM183AQ8IXX5 376 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 HIST3H2BBQ8N257 126 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 ARL6IP6Q8N6S5 226 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 C5orf17Q8NAS9 161 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 OR5T1Q8NG75 326 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 C10orf105Q8TEF2 133 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 FMC1Q96HJ9 113 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 CCL19Q99731 98 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 ATG101Q9BSB4 218 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 SHANK2-AS3Q9BTD1 123 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 SLC25A39Q9BZJ4 359 aaPredicted RBP3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 OTORQ9NRC9 128 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 EPDR1Q9UM22 224 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 ABCA2Q9BZC7 2435 aa3.38□□□□□ -1.87
UBE2D3-230ENST00000510599 CR1P17927 2039 aa3.37□□□□□ -1.87
UBE2D3-230ENST00000510599 TACC2O95359 2948 aa3.37□□□□□ -1.87
UBE2D3-230ENST00000510599 IGHV1-69DA0A0B4J2H0 117 aa3.37□□□□□ -1.87
UBE2D3-230ENST00000510599 SERTM2A0A1B0GWG4 89 aa3.37□□□□□ -1.87
UBE2D3-230ENST00000510599 FBLL1A6NHQ2 334 aaKnown RBP3.37□□□□□ -1.87
UBE2D3-230ENST00000510599 MRPS12O15235 138 aaKnown RBP3.37□□□□□ -1.87
UBE2D3-230ENST00000510599 ZNF253O75346 499 aa3.37□□□□□ -1.87
UBE2D3-230ENST00000510599 IGHV1-69P01742 117 aa3.37□□□□□ -1.87
UBE2D3-230ENST00000510599 APOHP02749 345 aaPredicted RBP3.37□□□□□ -1.87
UBE2D3-230ENST00000510599 MT-ND6P03923 174 aa3.37□□□□□ -1.87
UBE2D3-230ENST00000510599 TCRAP04437 139 aa3.37□□□□□ -1.87
UBE2D3-230ENST00000510599 SLC25A5P05141 298 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms