RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 FAM135AQ9P2D6 1515 aa2.16□□□□□ -2.06
HMGB1P22-201ENST00000505315 FAM135BQ49AJ0 1406 aa2.16□□□□□ -2.06
HMGB1P22-201ENST00000505315 FGD6Q6ZV73 1430 aa2.16□□□□□ -2.06
HMGB1P22-201ENST00000505315 DOCK4Q8N1I0 1966 aa2.16□□□□□ -2.06
HMGB1P22-201ENST00000505315 EIF4G3O43432 1585 aaKnown RBP2.15□□□□□ -2.06
HMGB1P22-201ENST00000505315 IGLV3-9A0A075B6K5 115 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 PNMA8CA0A1B0GUJ8 204 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 C9orf170A2RU37 121 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 TRACP01848 142 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 CLPSP04118 112 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 S100A8P05109 93 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 CTSDP07339 412 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 ASAH2BP0C7U1 165 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 PYYP10082 97 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 SLC25A4P12235 298 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 CSRP1P21291 193 aaKnown RBP2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 GNG4P50150 75 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 CDK6Q00534 326 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 ZNF846Q147U1 533 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 TEN1Q86WV5 123 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 RPS19BP1Q86WX3 136 aaKnown RBP2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 Q8IYB0 196 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 ATOH7Q8N100 152 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 TMEM254Q8TBM7 123 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 COPS9Q8WXC6 57 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 SLC35B3Q9H1N7 401 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 CXCL16Q9H2A7 254 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 SCN3BQ9NY72 215 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 MYH10P35580 1976 aa2.15□□□□□ -2.07
HMGB1P22-201ENST00000505315 ATRXP46100 2492 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 NUP210Q8TEM1 1887 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 SLIT3O75094 1523 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 IGKV2D-26A0A0A0MRZ7 120 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 C3orf85A0A1B0GTC6 90 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 ZNF736B4DX44 427 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 UBL3O95164 117 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 ETV6P41212 452 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 PPP3R1P63098 170 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 ZNF791Q3KP31 576 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 LINC00311Q8N616 119 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 HYLS1Q96M11 299 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 CST9LQ9H4G1 147 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 SAR1AQ9NR31 198 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 CYTL1Q9NRR1 136 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 COA4Q9NYJ1 87 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 VIRMAQ69YN4 1812 aaKnown RBP2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 XIRP1Q702N8 1843 aaKnown RBP2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 GRIN2AQ12879 1464 aa2.14□□□□□ -2.07
HMGB1P22-201ENST00000505315 TUBGCP6Q96RT7 1819 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 LOC100130705A0A1B0GUX0 176 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 ZNF705FA8MVS1 300 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 RTL8CO15255 209 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 YPEL1O60688 119 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 BAALC-AS2P0C853 105 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 SSR2P43308 183 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 TPPP2P59282 170 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 OR5AS1Q8N127 324 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 OTOSQ8NHW6 89 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 PP6455Q8WZ26 134 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 MUCL1Q96DR8 90 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 METTL1Q9UBP6 276 aaKnown RBP2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 LSM2Q9Y333 95 aaKnown RBP2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 DNAJC15Q9Y5T4 150 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 KIAA1107Q9UPP5 1409 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 SCAF11Q99590 1463 aaKnown RBP2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 MRC2Q9UBG0 1479 aa2.13□□□□□ -2.07
HMGB1P22-201ENST00000505315 THADAQ6YHU6 1953 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 ZNF646O15015 1829 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 PIK3C2AO00443 1686 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 TMEM2Q9UHN6 1383 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 KDM5CP41229 1560 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 KDM6AO15550 1401 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 TRBV20-1A0A075B6N2 111 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 IGHV1-24A0A0C4DH33 117 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 A0A1W2PNM2 257 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 ODF3BA8MYP8 253 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 ZNF737O75373 536 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 IGLV6-57P01721 117 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 CD3DP04234 171 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 CD2P06729 351 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 CD14P08571 375 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 HIST1H1DP16402 221 aaKnown RBP2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 MOBPQ13875 183 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 C1orf134Q5TEV5 83 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 ZNF826PQ6ZT77 177 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 SNX29P2Q8IUI4 249 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 CLECL1Q8IZS7 167 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 C8orf59Q8N0T1 100 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 Q8N814 137 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 SDF2Q99470 211 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 NABP2Q9BQ15 211 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 SMIM7Q9BQ49 75 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 BOKQ9UMX3 212 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 ARHGEF11O15085 1522 aa2.12□□□□□ -2.07
HMGB1P22-201ENST00000505315 ZNF407Q9C0G0 2248 aa2.11□□□□□ -2.07
HMGB1P22-201ENST00000505315 N4BP2Q86UW6 1770 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P22-201ENST00000505315 MYH11P35749 1972 aa2.11□□□□□ -2.07
HMGB1P22-201ENST00000505315 SPAARA0A1B0GVQ0 90 aa2.11□□□□□ -2.07
HMGB1P22-201ENST00000505315 TMEM218A2RU14 115 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms