RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 K7EQM0 130 aa11.97□□□□□ -0.49
MACF1-223ENST00000496360 MLANAQ16655 118 aa11.97□□□□□ -0.49
MACF1-223ENST00000496360 S100A7AQ86SG5 101 aa11.97□□□□□ -0.49
MACF1-223ENST00000496360 C8orf46Q8TAG6 207 aa11.97□□□□□ -0.49
MACF1-223ENST00000496360 Q9H3A6 140 aa11.97□□□□□ -0.49
MACF1-223ENST00000496360 TIMM8BQ9Y5J9 83 aaPredicted RBP11.97□□□□□ -0.49
MACF1-223ENST00000496360 FLNCQ14315 2725 aa11.97□□□□□ -0.49
MACF1-223ENST00000496360 PRRC2CQ9Y520 2896 aaKnown RBP11.97□□□□□ -0.49
MACF1-223ENST00000496360 C17orf58Q2M2W7 97 aa11.96□□□□□ -0.49
MACF1-223ENST00000496360 TRGV9Q99603 122 aa11.96□□□□□ -0.49
MACF1-223ENST00000496360 TFF1P04155 84 aa11.96□□□□□ -0.5
MACF1-223ENST00000496360 GP9P14770 177 aa11.96□□□□□ -0.5
MACF1-223ENST00000496360 GCSHP23434 173 aa11.96□□□□□ -0.5
MACF1-223ENST00000496360 NMUP48645 174 aa11.96□□□□□ -0.5
MACF1-223ENST00000496360 CRYBA4P53673 196 aa11.96□□□□□ -0.5
MACF1-223ENST00000496360 Q5PR19 223 aa11.96□□□□□ -0.5
MACF1-223ENST00000496360 TTC9CQ8N5M4 171 aa11.96□□□□□ -0.5
MACF1-223ENST00000496360 ATP6V0E2Q8NHE4 81 aa11.96□□□□□ -0.5
MACF1-223ENST00000496360 NPIPB3Q92617 1050 aa11.96□□□□□ -0.5
MACF1-223ENST00000496360 LINC00574Q9H8X3 128 aa11.96□□□□□ -0.5
MACF1-223ENST00000496360 SPENQ96T58 3664 aaKnown RBP11.96□□□□□ -0.5
MACF1-223ENST00000496360 FREM1Q5H8C1 2179 aa11.96□□□□□ -0.5
MACF1-223ENST00000496360 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.95□□□□□ -0.5
MACF1-223ENST00000496360 SAA1P0DJI8 122 aaPredicted RBP11.95□□□□□ -0.5
MACF1-223ENST00000496360 IFI27P40305 119 aaPredicted RBP11.95□□□□□ -0.5
MACF1-223ENST00000496360 ORMDL3Q8N138 153 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 CHAC1Q9BUX1 264 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 C12orf49Q9H741 205 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 TMEM14CQ9P0S9 112 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 LRRK2Q5S007 2527 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 TRAV26-1A0A087WT03 109 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 CELA3AP09093 270 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 ARMS2P0C7Q2 107 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 GNLYP22749 145 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 PAX8Q06710 450 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 MBNL2Q5VZF2 373 aaKnown RBP11.95□□□□□ -0.5
MACF1-223ENST00000496360 WFDC12Q8WWY7 111 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 RITA1Q96K30 269 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 SPAG8Q99932 426 aaPredicted RBP11.95□□□□□ -0.5
MACF1-223ENST00000496360 TTTY12Q9BZ98 90 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 GEMIN7Q9H840 131 aaKnown RBP11.95□□□□□ -0.5
MACF1-223ENST00000496360 ZMAT4Q9H898 229 aa11.95□□□□□ -0.5
MACF1-223ENST00000496360 hADV38S2A0JD32 116 aa11.94□□□□□ -0.5
MACF1-223ENST00000496360 FXYD2P54710 66 aa11.94□□□□□ -0.5
MACF1-223ENST00000496360 C5orf64Q2M2E5 130 aa11.94□□□□□ -0.5
MACF1-223ENST00000496360 PCP2Q8IVA1 136 aa11.94□□□□□ -0.5
MACF1-223ENST00000496360 CEND1Q8N111 149 aa11.94□□□□□ -0.5
MACF1-223ENST00000496360 ZNF418Q8TF45 676 aaPredicted RBP11.94□□□□□ -0.5
MACF1-223ENST00000496360 PRELID3AQ96N28 172 aa11.94□□□□□ -0.5
MACF1-223ENST00000496360 ASH1LQ9NR48 2969 aaKnown RBP11.94□□□□□ -0.5
MACF1-223ENST00000496360 OR11H12B2RN74 326 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 IGLL5B9A064 214 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 MAGEA5P43359 124 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 SPINK14Q6IE38 97 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 TMEM75Q8N9X5 138 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 OR11H1Q8NG94 326 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 OR11H2Q8NH07 326 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 TMEM167AQ8TBQ9 72 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 RND1Q92730 232 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 VCX2Q9H322 139 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 CYSLTR1Q9Y271 337 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 TRAV17A0A0B4J275 112 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 LINC01546A6NGU7 62 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 EVI2AP22794 236 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 GAGE13Q4V321 117 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 FAM104BQ5XKR9 115 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 TMEM116Q8NCL8 245 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 SRSF12Q8WXF0 261 aaKnown RBP11.93□□□□□ -0.5
MACF1-223ENST00000496360 ZNF479Q96JC4 524 aa11.93□□□□□ -0.5
MACF1-223ENST00000496360 DOPEY2Q9Y3R5 2298 aa11.92□□□□□ -0.5
MACF1-223ENST00000496360 PTPN13Q12923 2485 aa11.92□□□□□ -0.5
MACF1-223ENST00000496360 SLC25A17O43808 307 aa11.92□□□□□ -0.5
MACF1-223ENST00000496360 CRYGCP07315 174 aa11.92□□□□□ -0.5
MACF1-223ENST00000496360 SSBP2P81877 361 aaPredicted RBP11.92□□□□□ -0.5
MACF1-223ENST00000496360 WFDC2Q14508 124 aa11.92□□□□□ -0.5
MACF1-223ENST00000496360 PRR31Q5SQ13 230 aa11.92□□□□□ -0.5
MACF1-223ENST00000496360 PVRIGQ6DKI7 326 aa11.92□□□□□ -0.5
MACF1-223ENST00000496360 SGK494Q96LW2 274 aa11.92□□□□□ -0.5
MACF1-223ENST00000496360 CACNA1DQ01668 2161 aa11.92□□□□□ -0.5
MACF1-223ENST00000496360 A6NJY4 79 aa11.91□□□□□ -0.5
MACF1-223ENST00000496360 NDUFS7O75251 213 aa11.91□□□□□ -0.5
MACF1-223ENST00000496360 IGKV3-15P01624 115 aa11.91□□□□□ -0.5
MACF1-223ENST00000496360 CIARTQ8N365 385 aaPredicted RBP11.91□□□□□ -0.5
MACF1-223ENST00000496360 USP9XQ93008 2570 aaPredicted RBP11.91□□□□□ -0.5
MACF1-223ENST00000496360 RELNP78509 3460 aa11.91□□□□□ -0.5
MACF1-223ENST00000496360 LINC01619G3V211 115 aa11.91□□□□□ -0.5
MACF1-223ENST00000496360 IGLV2-11P01706 119 aa11.91□□□□□ -0.5
MACF1-223ENST00000496360 KLRD1Q13241 179 aa11.91□□□□□ -0.5
MACF1-223ENST00000496360 HECTD1Q9ULT8 2610 aa11.91□□□□□ -0.5
MACF1-223ENST00000496360 SVILO95425 2214 aa11.9□□□□□ -0.5
MACF1-223ENST00000496360 D6R8Y8 96 aa11.9□□□□□ -0.5
MACF1-223ENST00000496360 TSPAN13O95857 204 aa11.9□□□□□ -0.5
MACF1-223ENST00000496360 IGHV3-13P01766 116 aa11.9□□□□□ -0.5
MACF1-223ENST00000496360 ORM2P19652 201 aa11.9□□□□□ -0.5
MACF1-223ENST00000496360 ZNF833PQ6ZTB9 187 aa11.9□□□□□ -0.5
MACF1-223ENST00000496360 LYPD1Q8N2G4 141 aa11.9□□□□□ -0.5
MACF1-223ENST00000496360 C1orf162Q8NEQ5 155 aaPredicted RBP11.9□□□□□ -0.5
MACF1-223ENST00000496360 HARBI1Q96MB7 349 aa11.9□□□□□ -0.5
MACF1-223ENST00000496360 F11RQ9Y624 299 aaKnown RBP11.9□□□□□ -0.5
MACF1-223ENST00000496360 SELENOKQ9Y6D0 94 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms