RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 TMEM144Q7Z5S9 345 aa7.65□□□□□ -1.18
SNRNP200-207ENST00000493271 BAP18Q8IXM2 172 aa7.65□□□□□ -1.18
SNRNP200-207ENST00000493271 OR1S1Q8NH92 325 aa7.65□□□□□ -1.18
SNRNP200-207ENST00000493271 RXFP4Q8TDU9 374 aa7.65□□□□□ -1.18
SNRNP200-207ENST00000493271 TMEM263Q8WUH6 116 aaKnown RBP7.65□□□□□ -1.18
SNRNP200-207ENST00000493271 GNPNAT1Q96EK6 184 aaPredicted RBP7.65□□□□□ -1.18
SNRNP200-207ENST00000493271 CIB3Q96Q77 187 aaPredicted RBP7.65□□□□□ -1.18
SNRNP200-207ENST00000493271 MARVELD1Q9BSK0 173 aa7.65□□□□□ -1.18
SNRNP200-207ENST00000493271 PPP1R14DQ9NXH3 145 aa7.65□□□□□ -1.18
SNRNP200-207ENST00000493271 SCP2D1Q9UJQ7 156 aa7.65□□□□□ -1.18
SNRNP200-207ENST00000493271 RNF24Q9Y225 148 aa7.65□□□□□ -1.18
SNRNP200-207ENST00000493271 IGKV1OR2-108A0A075B7D4 117 aa7.64□□□□□ -1.19
SNRNP200-207ENST00000493271 MED6O75586 246 aa7.64□□□□□ -1.19
SNRNP200-207ENST00000493271 RPL7P18124 248 aaKnown RBP7.64□□□□□ -1.19
SNRNP200-207ENST00000493271 AZU1P20160 251 aa7.64□□□□□ -1.19
SNRNP200-207ENST00000493271 CDPF1Q6NVV7 123 aa7.64□□□□□ -1.19
SNRNP200-207ENST00000493271 FAAP20Q6NZ36 180 aa7.64□□□□□ -1.19
SNRNP200-207ENST00000493271 LYZL2Q7Z4W2 148 aa7.64□□□□□ -1.19
SNRNP200-207ENST00000493271 ZNF738Q8NE65 137 aa7.64□□□□□ -1.19
SNRNP200-207ENST00000493271 C17orf77Q96MU5 243 aa7.64□□□□□ -1.19
SNRNP200-207ENST00000493271 PGPEP1Q9NXJ5 209 aa7.64□□□□□ -1.19
SNRNP200-207ENST00000493271 MRPS16Q9Y3D3 137 aaKnown RBP7.64□□□□□ -1.19
SNRNP200-207ENST00000493271 TRAV12-2A0A075B6T6 113 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 TRAV8-2A0A0B4J237 113 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 INMT-MINDY4F8WBC2 141 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 H7BYZ3 331 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 EREGO14944 169 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 CCNKO75909 580 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 SLC25A6P12236 298 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 ORM2P19652 201 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 CDKN1BP46527 198 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 KRTAP10-2P60368 255 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 RAP2BP61225 183 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 RHOBP62745 196 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 FCN2Q15485 313 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 OR8A1Q8NGG7 326 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 OR51S1Q8NGJ8 323 aa7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 RNASE8Q8TDE3 154 aaKnown RBP7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 DMBT1Q9UGM3 2413 aaPredicted RBP7.63□□□□□ -1.19
SNRNP200-207ENST00000493271 TRAV26-1A0A087WT03 109 aa7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 A0A087X0K7 114 aa7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 ANKRD20A5PA0PJZ0 165 aa7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 H3BRN7 92 aa7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 PITX3O75364 302 aa7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 PRM2P04554 102 aa7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 INAFM2P0DMQ5 153 aa7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 BTCP35070 178 aa7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 HIST1H1AQ02539 215 aaPredicted RBP7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 FGL1Q08830 312 aa7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 OR5I1Q13606 314 aa7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 CCDC28AQ8IWP9 274 aa7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 LINC00612Q8N6U2 182 aa7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 KRTAP1-5Q9BYS1 174 aa7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 SLC25A39Q9BZJ4 359 aaPredicted RBP7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 NOP10Q9NPE3 64 aaKnown RBP7.62□□□□□ -1.19
SNRNP200-207ENST00000493271 C7orf66A4D0T2 115 aa7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 PRAF2O60831 178 aa7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 RLN2P04090 185 aa7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 TCRBP04435 133 aa7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 HTN1P15515 57 aa7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 CXCL2P19875 107 aa7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 CXCL3P19876 107 aa7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 SELENOTP62341 195 aa7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 RNF182Q8N6D2 247 aa7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 FRZBQ92765 325 aa7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 SHANK2-AS3Q9BTD1 123 aa7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 NUDT15Q9NV35 164 aa7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 PAIP2BQ9ULR5 123 aaKnown RBP7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 ALG5Q9Y673 324 aa7.61□□□□□ -1.19
SNRNP200-207ENST00000493271 SNURFLB1AK76 121 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 PRSS46E5RG02 174 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 H2AFB2P0C5Z0 115 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 IAPPP10997 89 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 PLP1P60201 277 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 RRAS2P62070 204 aaPredicted RBP7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 AKR1C1Q04828 323 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 PSG3Q16557 428 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 ESRGQ1W209 222 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 IGFL4Q6B9Z1 124 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 LYPD1Q8N2G4 141 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 LRTM2Q8N967 370 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 LRRC20Q8TCA0 184 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 PRR13Q9NZ81 148 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 HIGD1AQ9Y241 93 aa7.6□□□□□ -1.19
SNRNP200-207ENST00000493271 SYNGR2O43760 224 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 HYPMO75409 117 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 IL5P05113 134 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 LINC00315P59091 139 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 ERVFC1-1P60608 527 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 C4orf46Q504U0 113 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 TMEM128Q5BJH2 165 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 LCN15Q6UWW0 184 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 ACOT7LQ6ZUV0 252 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 UHRF2Q96PU4 802 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 SLC50A1Q9BRV3 221 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 C20orf85Q9H1P6 137 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 MCUBQ9NWR8 336 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 ZNF586Q9NXT0 402 aa7.59□□□□□ -1.19
SNRNP200-207ENST00000493271 FAT1Q14517 4588 aa7.58□□□□□ -1.2
SNRNP200-207ENST00000493271 TRAV6A0A075B6T7 132 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms