RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 IGHV1-3A0A0C4DH29 117 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 NKX2-6A6NCS4 301 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 CCDC160A6NGH7 325 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 BUB1B-PAK6H3BSN5 160 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 UBFD1O14562 309 aaKnown RBP1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF73O43830 326 aaPredicted RBP1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 KLF7O75840 302 aaPredicted RBP1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 SCO1O75880 301 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 NDUFC2O95298 119 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 NRASP01111 189 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 HRASP01112 189 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 KRASP01116 189 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 PDYNP01213 254 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 MPC1LP0DKB6 136 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 CCL3P10147 92 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 TSPEAR-AS2P59090 65 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 TBPL1P62380 186 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 CAV1Q03135 178 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 KISS1Q15726 138 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 FAM229BQ4G0N7 80 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 MRPL51Q4U2R6 128 aaKnown RBP1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 Q5W150 140 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 AGTRAPQ6RW13 159 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 SCXQ7RTU7 201 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 OR10D4PQ8NGN7 298 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 SKA2Q8WVK7 121 aaPredicted RBP1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 DOHHQ9BU89 302 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 OR8D2Q9GZM6 311 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 LHX9Q9NQ69 397 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 TVP23BQ9NYZ1 205 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 AK3Q9UIJ7 227 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF835Q9Y2P0 537 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 COL6A6A6NMZ7 2263 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 ARHGAP21Q5T5U3 1957 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 AKAP9Q99996 3911 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 VPS13CQ709C8 3753 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 CSMD1Q96PZ7 3565 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 FLNBO75369 2602 aaKnown RBP1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 ADGRG4Q8IZF6 3080 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF407Q9C0G0 2248 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 DOCK10Q96BY6 2186 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 TRBV6-6A0A0A6YYG2 114 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 TLCD2A6NGC4 264 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 IGLL5B9A064 214 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 E7EQ34 232 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 H0YGG7 62 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 H3BMM0 161 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 K7EP13 123 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 LECT2O14960 151 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 PRB1P04280 392 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 CD7P09564 240 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 LINC00869P0C866 280 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF705DP0CH99 300 aaPredicted RBP1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 TAS2R30P59541 319 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 CDC42P60953 191 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 Q5XG85 94 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 SSX8Q7RTT4 187 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 CTAGE3PQ8IX95 158 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 MBD3L1Q8WWY6 194 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 UBE2WQ96B02 151 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 ADAT3Q96EY9 351 aaPredicted RBP1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 CYYR1Q96J86 154 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 GPX7Q96SL4 187 aaPredicted RBP1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 RNF5Q99942 180 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 VPS25Q9BRG1 176 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 C20orf27Q9GZN8 174 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 COMMD5Q9GZQ3 224 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 IFI27L2Q9H2X8 130 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 C11orf1Q9H5F2 150 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 EFCAB1Q9HAE3 211 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 CACYBPQ9HB71 228 aaKnown RBP1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 POPDC3Q9HBV1 291 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 OTORQ9NRC9 128 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 HSPB8Q9UJY1 196 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 LRRK2Q5S007 2527 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 PLXNB1O43157 2135 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 RP1L1Q8IWN7 2480 aaPredicted RBP1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 HECTD1Q9ULT8 2610 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 USP9YO00507 2555 aaPredicted RBP1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 TRBV19A0A075B6N1 114 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 IGKV1D-37A0A075B6S9 117 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 TRAV36DV7A0A075B6V5 113 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 LOC107984640A0A0U1RRK4 108 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 ODAMA1E959 279 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 PINLYPA6NC86 204 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF860A6NHJ4 632 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 C1orf196B1AJZ1 125 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 SLC17A3O00476 420 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 LHBP01229 141 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 IGHV1-46P01743 117 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 IGKV1-16P04430 117 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 RBP1P09455 135 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 ELK1P19419 428 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 PPIBP23284 216 aaKnown RBP1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 LPAR6P43657 344 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 SRP9P49458 86 aaKnown RBP1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 FOXA1P55317 472 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 DNAJB13P59910 316 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 RPL30P62888 115 aaKnown RBP1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 BTG2P78543 158 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms