RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 SEC11CQ9BY50 192 aa2.2□□□□□ -2.06
FN1-222ENST00000485567 RERGLQ9H628 205 aa2.2□□□□□ -2.06
FN1-222ENST00000485567 FKBP11Q9NYL4 201 aa2.2□□□□□ -2.06
FN1-222ENST00000485567 METTL1Q9UBP6 276 aaKnown RBP2.2□□□□□ -2.06
FN1-222ENST00000485567 ZNF443Q9Y2A4 671 aaPredicted RBP2.2□□□□□ -2.06
FN1-222ENST00000485567 LOXHD1Q8IVV2 1947 aa2.2□□□□□ -2.06
FN1-222ENST00000485567 DICER1Q9UPY3 1922 aaKnown RBP2.2□□□□□ -2.06
FN1-222ENST00000485567 A2ML1A8K2U0 1454 aa2.2□□□□□ -2.06
FN1-222ENST00000485567 MYH11P35749 1972 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 MED1Q15648 1581 aaPredicted RBP2.19□□□□□ -2.06
FN1-222ENST00000485567 TICRRQ7Z2Z1 1910 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 KDM6AO15550 1401 aaPredicted RBP2.19□□□□□ -2.06
FN1-222ENST00000485567 IGKV1D-37A0A075B6S9 117 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 IGHV3-73A0A0B4J1V6 119 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 H3BT86 120 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 TMEM258P61165 79 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 DYNLT1P63172 113 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 AKR1C1Q04828 323 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 FOXF1Q12946 379 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 MIAQ16674 131 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 TMEM155Q4W5P6 130 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 NOXRED1Q6NXP6 359 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 TMEM136Q6ZRR5 245 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 RPRMLQ8N4K4 120 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 KCNRGQ8N5I3 272 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 C1orf64Q8NEQ6 169 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 BPIFB6Q8NFQ5 453 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 OR4B1Q8NGF8 309 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 OR5D16Q8NGK9 328 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 GINS4Q9BRT9 223 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 PRO1933Q9H354 126 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 Q9H521 79 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 RPRMQ9NS64 109 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 TAS2R8Q9NYW2 309 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 SCP2D1Q9UJQ7 156 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 FER1L6Q2WGJ9 1857 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 CDK5RAP2Q96SN8 1893 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 NCAPD3P42695 1498 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 DENND4CQ5VZ89 1909 aa2.19□□□□□ -2.06
FN1-222ENST00000485567 TRAV12-2A0A075B6T6 113 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 C17orf98A8MV24 154 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 NPYP01303 97 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 TNFP01375 233 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 CD3DP04234 171 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 DEFA4P12838 97 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 RPL28P46779 137 aaKnown RBP2.18□□□□□ -2.06
FN1-222ENST00000485567 CDK5R1Q15078 307 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 MRPL54Q6P161 138 aaKnown RBP2.18□□□□□ -2.06
FN1-222ENST00000485567 FOXI2Q6ZQN5 318 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 SLC35E3Q7Z769 313 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 Q8N2B8 174 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 MUC7Q8TAX7 377 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 AGPAT4-IT1Q9H0P7 198 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 SLC35B3Q9H1N7 401 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 V9GYS6 101 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 SVILO95425 2214 aa2.18□□□□□ -2.06
FN1-222ENST00000485567 TOPBP1Q92547 1522 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 DLC1Q96QB1 1528 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 SCN4AP35499 1836 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 ATAD5Q96QE3 1844 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 TRBV20-1A0A075B6N2 111 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.17□□□□□ -2.06
FN1-222ENST00000485567 IGHV3-15A0A0B4J1V0 119 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 A0A1W2PQD3 144 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 GEMIN2O14893 280 aaKnown RBP2.17□□□□□ -2.06
FN1-222ENST00000485567 ZNF737O75373 536 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 CTSDP07339 412 aaPredicted RBP2.17□□□□□ -2.06
FN1-222ENST00000485567 SLC25A4P12235 298 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 KRTAP10-8P60410 259 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 ZNF90Q03938 601 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 KLRD1Q13241 179 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 KHDC3LQ587J8 217 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 PYY3Q5JQD4 70 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 Q6ZUT4 128 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 TTC9CQ8N5M4 171 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 Q8NDZ9 215 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 AQP3Q92482 292 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 LSM10Q969L4 123 aaKnown RBP2.17□□□□□ -2.06
FN1-222ENST00000485567 SMDT1Q9H4I9 107 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 TRAPPC1Q9Y5R8 145 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 CHCHD2Q9Y6H1 151 aaPredicted RBP2.17□□□□□ -2.06
FN1-222ENST00000485567 HSPE1-MOB4S4R3N1 261 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 MED14O60244 1454 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 MAST2Q6P0Q8 1798 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 KIAA1107Q9UPP5 1409 aa2.17□□□□□ -2.06
FN1-222ENST00000485567 COL4A4P53420 1690 aaPredicted RBP2.16□□□□□ -2.06
FN1-222ENST00000485567 COL1A1P02452 1464 aaPredicted RBP2.16□□□□□ -2.06
FN1-222ENST00000485567 GRIFINA4D1Z8 144 aa2.16□□□□□ -2.06
FN1-222ENST00000485567 H3BQ85 93 aa2.16□□□□□ -2.06
FN1-222ENST00000485567 H3BQF6 201 aa2.16□□□□□ -2.06
FN1-222ENST00000485567 SHBGP04278 402 aa2.16□□□□□ -2.06
FN1-222ENST00000485567 CRYGAP11844 174 aa2.16□□□□□ -2.06
FN1-222ENST00000485567 IFITM1P13164 125 aa2.16□□□□□ -2.06
FN1-222ENST00000485567 ZNF22P17026 224 aaPredicted RBP2.16□□□□□ -2.06
FN1-222ENST00000485567 FUSP35637 526 aaKnown RBP eCLIP2.16□□□□□ -2.06
FN1-222ENST00000485567 XCL1P47992 114 aa2.16□□□□□ -2.06
FN1-222ENST00000485567 BLCAPP62952 87 aa2.16□□□□□ -2.06
FN1-222ENST00000485567 UBA52P62987 128 aaKnown RBP2.16□□□□□ -2.06
FN1-222ENST00000485567 SS18Q15532 418 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms