RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 SLAQ13239 276 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 GDF5OSQ5U4N7 250 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 CLEC2AQ6UVW9 174 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 TCF24Q7RTU0 167 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 LYPD1Q8N2G4 141 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 ZNF502Q8TBZ5 544 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 VN1R17PQ8TDU5 208 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 TXN2Q99757 166 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 ZNF492Q9P255 531 aa10.14□□□□□ -0.79
SEC13-216ENST00000479868 ZNF462Q96JM2 2506 aa10.13□□□□□ -0.79
SEC13-216ENST00000479868 NDUFS8O00217 210 aa10.13□□□□□ -0.79
SEC13-216ENST00000479868 P01737 135 aa10.13□□□□□ -0.79
SEC13-216ENST00000479868 GPR183P32249 361 aa10.13□□□□□ -0.79
SEC13-216ENST00000479868 Q0VG73 95 aa10.13□□□□□ -0.79
SEC13-216ENST00000479868 S100A7AQ86SG5 101 aa10.13□□□□□ -0.79
SEC13-216ENST00000479868 BAGE3Q86Y29 109 aa10.13□□□□□ -0.79
SEC13-216ENST00000479868 PIFOQ8TCI5 191 aa10.13□□□□□ -0.79
SEC13-216ENST00000479868 WIPF2Q8TF74 440 aaPredicted RBP10.13□□□□□ -0.79
SEC13-216ENST00000479868 ZNF785A8K8V0 405 aa10.12□□□□□ -0.79
SEC13-216ENST00000479868 KLK9Q2XQG4 91 aa10.12□□□□□ -0.79
SEC13-216ENST00000479868 TMEM75Q8N9X5 138 aa10.12□□□□□ -0.79
SEC13-216ENST00000479868 GTSF1Q8WW33 167 aa10.12□□□□□ -0.79
SEC13-216ENST00000479868 NRGNQ92686 78 aa10.12□□□□□ -0.79
SEC13-216ENST00000479868 KLK9Q9UKQ9 250 aa10.12□□□□□ -0.79
SEC13-216ENST00000479868 APCSP02743 223 aa10.12□□□□□ -0.79
SEC13-216ENST00000479868 IGHV4-38-2P0DP08 117 aa10.12□□□□□ -0.79
SEC13-216ENST00000479868 ESDP10768 282 aa10.12□□□□□ -0.79
SEC13-216ENST00000479868 SRIP30626 198 aa10.12□□□□□ -0.79
SEC13-216ENST00000479868 PDE6HQ13956 83 aa10.12□□□□□ -0.79
SEC13-216ENST00000479868 C9orf152Q5JTZ5 239 aa10.12□□□□□ -0.79
SEC13-216ENST00000479868 RASL11AQ6T310 242 aa10.12□□□□□ -0.79
SEC13-216ENST00000479868 SOX21Q9Y651 276 aaPredicted RBP10.12□□□□□ -0.79
SEC13-216ENST00000479868 DIRC3C9JPN6 131 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 SCGB2A1O75556 95 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 CLEC3BP05452 202 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 DAZAP1Q96EP5 407 aaKnown RBP10.11□□□□□ -0.79
SEC13-216ENST00000479868 CCDC140Q96MF4 163 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 MS4A10Q96PG2 267 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 RABAC1Q9UI14 185 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 TRBV6-1A0A0K0K1D8 114 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 A8MWL6 223 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 NPIPB6E9PJ23 425 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 CAMPP49913 170 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 PSG3Q16557 428 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 CT83Q5H943 113 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 PRR31Q5SQ13 230 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 ZC2HC1AQ96GY0 325 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 NOL4LQ96MY1 436 aaPredicted RBP10.11□□□□□ -0.79
SEC13-216ENST00000479868 RCHY1Q96PM5 261 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 SSBP4Q9BWG4 385 aaPredicted RBP10.11□□□□□ -0.79
SEC13-216ENST00000479868 MOB4Q9Y3A3 225 aa10.11□□□□□ -0.79
SEC13-216ENST00000479868 A0A1B0GXF2 115 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 RPL7P18124 248 aaKnown RBP10.1□□□□□ -0.79
SEC13-216ENST00000479868 COL8A1P27658 744 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 TOMM20LQ6UXN7 152 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 BBC3Q96PG8 261 aaPredicted RBP10.1□□□□□ -0.79
SEC13-216ENST00000479868 PRO1933Q9H354 126 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 AAMDCQ9H7C9 122 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 PSG8Q9UQ74 426 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 SMAD5-AS1Q9Y6J3 95 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 FAM208BQ5VWN6 2430 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 K7EQM0 130 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 CD33P20138 364 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 OR10J3Q5JRS4 329 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 CLEC19AQ6UXS0 136 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 TMEM190Q8WZ59 177 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 ZFAND3Q9H8U3 227 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 LINC00527Q9UJ94 153 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 LRRK2Q5S007 2527 aa10.1□□□□□ -0.79
SEC13-216ENST00000479868 ZNF253O75346 499 aa10.09□□□□□ -0.79
SEC13-216ENST00000479868 TPPP2P59282 170 aa10.09□□□□□ -0.79
SEC13-216ENST00000479868 ATP5L2Q7Z4Y8 100 aa10.09□□□□□ -0.79
SEC13-216ENST00000479868 PGLYRP4Q96LB8 373 aa10.09□□□□□ -0.79
SEC13-216ENST00000479868 MEGF9Q9H1U4 602 aa10.09□□□□□ -0.79
SEC13-216ENST00000479868 ZFP30Q9Y2G7 519 aa10.09□□□□□ -0.79
SEC13-216ENST00000479868 CENPEQ02224 2701 aa10.09□□□□□ -0.79
SEC13-216ENST00000479868 PAFAH1B2P68402 229 aa10.09□□□□□ -0.79
SEC13-216ENST00000479868 Q6ZWC4 215 aa10.09□□□□□ -0.79
SEC13-216ENST00000479868 GFRA4Q9GZZ7 299 aa10.09□□□□□ -0.79
SEC13-216ENST00000479868 FBN2P35556 2912 aa10.09□□□□□ -0.79
SEC13-216ENST00000479868 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.08□□□□□ -0.82e-9■■■□□ 14.9
SEC13-216ENST00000479868 MSMBP08118 114 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 PKIAP61925 76 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 PSG9Q00887 426 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 IGFL4Q6B9Z1 124 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 OR2D3Q8NGH3 330 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 C8orf49Q96NF6 230 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 SCGB1D1O95968 90 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 CRIP1P50238 77 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 HBBP68871 147 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 LY6EQ16553 131 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 IQCJQ1A5X6 159 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 C19orf54Q5BKX5 351 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 RBPMS2Q6ZRY4 209 aaKnown RBP10.08□□□□□ -0.8
SEC13-216ENST00000479868 ZNF664Q8N3J9 261 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 SAMD10Q9BYL1 202 aa10.08□□□□□ -0.8
SEC13-216ENST00000479868 POLQO75417 2590 aa10.07□□□□□ -0.8
SEC13-216ENST00000479868 IGKV2-40A0A087WW87 121 aaPredicted RBP10.07□□□□□ -0.8
SEC13-216ENST00000479868 TRAV41A0A0B4J266 112 aa10.07□□□□□ -0.8
SEC13-216ENST00000479868 CLPSL1A2RUU4 121 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms