RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 FAM110AQ9BQ89 295 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 SLC45A2Q9UMX9 530 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 U3KQK5 164 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 LOC102724200A0A096LPH7 203 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-208ENST00000476739 TRAV2A0A0B4J234 112 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 UBE2L5PA0A1B0GUS4 154 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 RNF222A6NCQ9 220 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 HELTA6NFD8 242 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 E5RGE8 158 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 ZNF688P0C7X2 276 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 LINC00614P0C842 121 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 RPL35AP18077 110 aaKnown RBP7.16□□□□□ -1.26
HDAC3-208ENST00000476739 PLP1P60201 277 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 EWSR1Q01844 656 aaKnown RBP eCLIP7.16□□□□□ -1.26
HDAC3-208ENST00000476739 UHRF2Q96PU4 802 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 SCRT1Q9BWW7 348 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 SLC25A22Q9H936 323 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 UQCC1Q9NVA1 299 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 WDR83OSQ9Y284 106 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 AGRNO00468 2067 aa7.16□□□□□ -1.26
HDAC3-208ENST00000476739 FXYD6-FXYD2A0A087WZ82 144 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 H3BRN7 92 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 TPT1P13693 172 aaKnown RBP7.15□□□□□ -1.26
HDAC3-208ENST00000476739 HOXA5P20719 270 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 PCP4P48539 62 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 SELENOTP62341 195 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 GAGE1Q13065 139 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 FAM74A1Q5RGS3 127 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 C1orf194Q5T5A4 169 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 MIC13Q5XKP0 118 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 ZNF546Q86UE3 836 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 OR8I2Q8N0Y5 310 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 OR5C1Q8NGR4 320 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 C14orf144Q96I85 54 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 TMEM147Q9BVK8 224 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 GGTLC1Q9BX51 225 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 SLC25A39Q9BZJ4 359 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-208ENST00000476739 ZMAT4Q9H898 229 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 NRN1Q9NPD7 142 aa7.15□□□□□ -1.26
HDAC3-208ENST00000476739 KNCNA6PVL3 124 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 SOCS3O14543 225 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 HYPMO75409 117 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 OR5G3P0C626 314 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 FGF7P21781 194 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 DDTP30046 118 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 CAMLGP49069 296 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 DEFB1P60022 68 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 HBG1P69891 147 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 HBG2P69892 147 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 PRR20EP86478 221 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 PRR20CP86479 221 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 PRR20DP86480 221 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 PRR20BP86481 221 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 PRR20AP86496 221 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 BAXQ07812 192 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 CLINT1Q14677 625 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 PSMG4Q5JS54 123 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 SAPCD1Q5SSQ6 148 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 MORN5Q5VZ52 161 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 TMEM88Q6PEY1 159 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 INO80EQ8NBZ0 244 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-208ENST00000476739 TMEM37Q8WXS4 190 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 SPATA25Q9BR10 227 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 SHANK2-AS3Q9BTD1 123 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 SLC25A31Q9H0C2 315 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 ARV1Q9H2C2 271 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 SMDT1Q9H4I9 107 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 TREM1Q9NP99 234 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 TENM3Q9P273 2699 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 HIGD1AQ9Y241 93 aa7.14□□□□□ -1.27
HDAC3-208ENST00000476739 MBP02144 154 aa7.13□□□□□ -1.27
HDAC3-208ENST00000476739 LYL1P12980 280 aa7.13□□□□□ -1.27
HDAC3-208ENST00000476739 CMC4P56277 68 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-208ENST00000476739 NUTF2P61970 127 aaKnown RBP7.13□□□□□ -1.27
HDAC3-208ENST00000476739 RHEBQ15382 184 aa7.13□□□□□ -1.27
HDAC3-208ENST00000476739 ATP6V1FQ16864 119 aa7.13□□□□□ -1.27
HDAC3-208ENST00000476739 IGFL4Q6B9Z1 124 aa7.13□□□□□ -1.27
HDAC3-208ENST00000476739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.13□□□□□ -1.27
HDAC3-208ENST00000476739 CBLN2Q8IUK8 224 aa7.13□□□□□ -1.27
HDAC3-208ENST00000476739 C2CD4CQ8TF44 421 aa7.13□□□□□ -1.27
HDAC3-208ENST00000476739 RSG1Q9BU20 258 aa7.13□□□□□ -1.27
HDAC3-208ENST00000476739 SMIM3Q9BZL3 60 aa7.13□□□□□ -1.27
HDAC3-208ENST00000476739 FBXL17Q9UF56 701 aa7.13□□□□□ -1.27
HDAC3-208ENST00000476739 TRAV5A0A0B4J249 113 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 A0A1B0GV90 55 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 MRPS12O15235 138 aaKnown RBP7.12□□□□□ -1.27
HDAC3-208ENST00000476739 SNRPCP09234 159 aaKnown RBP7.12□□□□□ -1.27
HDAC3-208ENST00000476739 PET100P0DJ07 73 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 RAB5AP20339 215 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 RPL12P30050 165 aaKnown RBP7.12□□□□□ -1.27
HDAC3-208ENST00000476739 RPL29P47914 159 aaKnown RBP7.12□□□□□ -1.27
HDAC3-208ENST00000476739 DEFB135Q30KP9 77 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 ACTL10Q5JWF8 245 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 GDF5OSQ5U4N7 250 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 LINC00305Q7Z4B0 112 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 HIST1H2BAQ96A08 127 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 C20orf173Q96LM9 149 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 WWC2-AS2Q96NR7 200 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 OVOL2Q9BRP0 275 aa7.12□□□□□ -1.27
HDAC3-208ENST00000476739 NPCDR1Q9BY65 106 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms