RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 KRTAP10-3P60369 221 aa13.48□□□□□ -0.25
HSPG2-208ENST00000471322 PDE6HQ13956 83 aa13.48□□□□□ -0.25
HSPG2-208ENST00000471322 OR5B12Q96R08 314 aa13.48□□□□□ -0.25
HSPG2-208ENST00000471322 Q9H3A6 140 aa13.48□□□□□ -0.25
HSPG2-208ENST00000471322 C16orf95Q9H693 158 aa13.48□□□□□ -0.25
HSPG2-208ENST00000471322 PKD1L1Q8TDX9 2849 aa13.47□□□□□ -0.25
HSPG2-208ENST00000471322 MRPS12O15235 138 aaKnown RBP13.47□□□□□ -0.25
HSPG2-208ENST00000471322 FOLR2P14207 255 aa13.47□□□□□ -0.25
HSPG2-208ENST00000471322 ATF4P18848 351 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-208ENST00000471322 CENPWQ5EE01 88 aa13.47□□□□□ -0.25
HSPG2-208ENST00000471322 WFDC12Q8WWY7 111 aa13.47□□□□□ -0.25
HSPG2-208ENST00000471322 ZFAND3Q9H8U3 227 aa13.47□□□□□ -0.25
HSPG2-208ENST00000471322 VWFP04275 2813 aa13.47□□□□□ -0.25
HSPG2-208ENST00000471322 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.46□□□□□ -0.25
HSPG2-208ENST00000471322 IGHG4P01861 327 aa13.46□□□□□ -0.25
HSPG2-208ENST00000471322 RAB5AP20339 215 aa13.46□□□□□ -0.25
HSPG2-208ENST00000471322 S100PP25815 95 aa13.46□□□□□ -0.25
HSPG2-208ENST00000471322 PROK1P58294 105 aa13.46□□□□□ -0.25
HSPG2-208ENST00000471322 ELOBQ15370 118 aa13.46□□□□□ -0.25
HSPG2-208ENST00000471322 C11orf44Q8N8P7 122 aa13.46□□□□□ -0.25
HSPG2-208ENST00000471322 SFRP2Q96HF1 295 aa13.46□□□□□ -0.25
HSPG2-208ENST00000471322 GPR82Q96P67 336 aa13.46□□□□□ -0.25
HSPG2-208ENST00000471322 ATG101Q9BSB4 218 aa13.46□□□□□ -0.25
HSPG2-208ENST00000471322 A0A1B0GUS0 222 aa13.46□□□□□ -0.26
HSPG2-208ENST00000471322 ARL3P36405 182 aa13.46□□□□□ -0.26
HSPG2-208ENST00000471322 C1orf194Q5T5A4 169 aa13.46□□□□□ -0.26
HSPG2-208ENST00000471322 OR8I2Q8N0Y5 310 aa13.46□□□□□ -0.26
HSPG2-208ENST00000471322 CMTM2Q8TAZ6 248 aa13.46□□□□□ -0.26
HSPG2-208ENST00000471322 METTL26Q96S19 204 aa13.46□□□□□ -0.26
HSPG2-208ENST00000471322 ZNF747Q9BV97 191 aa13.46□□□□□ -0.26
HSPG2-208ENST00000471322 KLF12Q9Y4X4 402 aa13.46□□□□□ -0.26
HSPG2-208ENST00000471322 SNRPCP09234 159 aaKnown RBP13.45□□□□□ -0.26
HSPG2-208ENST00000471322 SLC35B1P78383 322 aa13.45□□□□□ -0.26
HSPG2-208ENST00000471322 TMEM183BQ1AE95 376 aa13.45□□□□□ -0.26
HSPG2-208ENST00000471322 ZNF414Q96IQ9 312 aa13.45□□□□□ -0.26
HSPG2-208ENST00000471322 IMMP2LQ96T52 175 aa13.45□□□□□ -0.26
HSPG2-208ENST00000471322 SERTAD4Q9NUC0 356 aa13.45□□□□□ -0.26
HSPG2-208ENST00000471322 PGPEP1LA6NFU8 196 aa13.44□□□□□ -0.26
HSPG2-208ENST00000471322 GALR1P47211 349 aa13.44□□□□□ -0.26
HSPG2-208ENST00000471322 UBE2G1P62253 170 aa13.44□□□□□ -0.26
HSPG2-208ENST00000471322 PSG9Q00887 426 aa13.44□□□□□ -0.26
HSPG2-208ENST00000471322 KLHDC1Q8N7A1 406 aa13.44□□□□□ -0.26
HSPG2-208ENST00000471322 OR10G8Q8NGN5 311 aa13.44□□□□□ -0.26
HSPG2-208ENST00000471322 SMIM12Q96EX1 92 aa13.44□□□□□ -0.26
HSPG2-208ENST00000471322 IGF2BP2-AS1Q96M15 143 aa13.44□□□□□ -0.26
HSPG2-208ENST00000471322 KLK15Q9H2R5 256 aa13.44□□□□□ -0.26
HSPG2-208ENST00000471322 AURKAIP1Q9NWT8 199 aaPredicted RBP13.44□□□□□ -0.26
HSPG2-208ENST00000471322 MLXQ9UH92 298 aa13.44□□□□□ -0.26
HSPG2-208ENST00000471322 URGCP-MRPS24S4R325 110 aa13.44□□□□□ -0.26
HSPG2-208ENST00000471322 TRBV24-1A0A075B6N3 115 aa13.43□□□□□ -0.26
HSPG2-208ENST00000471322 IGHV3-35A0A0C4DH35 117 aa13.43□□□□□ -0.26
HSPG2-208ENST00000471322 NDUFA4O00483 81 aa13.43□□□□□ -0.26
HSPG2-208ENST00000471322 TCRAP04437 139 aa13.43□□□□□ -0.26
HSPG2-208ENST00000471322 PSMB8P28062 276 aa13.43□□□□□ -0.26
HSPG2-208ENST00000471322 TEX38Q6PEX7 206 aa13.43□□□□□ -0.26
HSPG2-208ENST00000471322 KCNIP4Q6PIL6 250 aa13.43□□□□□ -0.26
HSPG2-208ENST00000471322 Q8N2B8 174 aa13.43□□□□□ -0.26
HSPG2-208ENST00000471322 ARL6IP6Q8N6S5 226 aa13.43□□□□□ -0.26
HSPG2-208ENST00000471322 OR4X2Q8NGF9 303 aa13.43□□□□□ -0.26
HSPG2-208ENST00000471322 FMC1Q96HJ9 113 aa13.43□□□□□ -0.26
HSPG2-208ENST00000471322 BTF3L4Q96K17 158 aa13.43□□□□□ -0.26
HSPG2-208ENST00000471322 PPP5D1E7EU14 171 aa13.42□□□□□ -0.26
HSPG2-208ENST00000471322 H3BTX0 84 aa13.42□□□□□ -0.26
HSPG2-208ENST00000471322 BUB3O43684 328 aa13.42□□□□□ -0.26
HSPG2-208ENST00000471322 ZNF253O75346 499 aa13.42□□□□□ -0.26
HSPG2-208ENST00000471322 GCGP01275 180 aa13.42□□□□□ -0.26
HSPG2-208ENST00000471322 SIGLEC15Q6ZMC9 328 aa13.42□□□□□ -0.26
HSPG2-208ENST00000471322 BAGE2Q86Y30 109 aa13.42□□□□□ -0.26
HSPG2-208ENST00000471322 AAMDCQ9H7C9 122 aa13.42□□□□□ -0.26
HSPG2-208ENST00000471322 C1orf196B1AJZ1 125 aa13.42□□□□□ -0.26
HSPG2-208ENST00000471322 K7EN84 100 aa13.42□□□□□ -0.26
HSPG2-208ENST00000471322 K7EQM0 130 aa13.42□□□□□ -0.26
HSPG2-208ENST00000471322 PFN1P07737 140 aaKnown RBP13.42□□□□□ -0.26
HSPG2-208ENST00000471322 GNG5P63218 68 aa13.42□□□□□ -0.26
HSPG2-208ENST00000471322 SHISA2Q6UWI4 295 aa13.42□□□□□ -0.26
HSPG2-208ENST00000471322 GGCTO75223 188 aaKnown RBP13.41□□□□□ -0.26
HSPG2-208ENST00000471322 ELANEP08246 267 aa13.41□□□□□ -0.26
HSPG2-208ENST00000471322 MEOX2P50222 304 aa13.41□□□□□ -0.26
HSPG2-208ENST00000471322 FOXE3Q13461 319 aa13.41□□□□□ -0.26
HSPG2-208ENST00000471322 FAM210BQ96KR6 192 aa13.41□□□□□ -0.26
HSPG2-208ENST00000471322 LINC00479Q96M42 142 aa13.41□□□□□ -0.26
HSPG2-208ENST00000471322 OSTCQ9NRP0 149 aa13.41□□□□□ -0.26
HSPG2-208ENST00000471322 U3KQE9 123 aa13.41□□□□□ -0.26
HSPG2-208ENST00000471322 A0A087X0K7 114 aa13.4□□□□□ -0.26
HSPG2-208ENST00000471322 TGIF2-C20orf24A0A0A6YYL0 155 aa13.4□□□□□ -0.26
HSPG2-208ENST00000471322 TRBV6-1A0A0K0K1D8 114 aa13.4□□□□□ -0.26
HSPG2-208ENST00000471322 SERTM2A0A1B0GWG4 89 aa13.4□□□□□ -0.26
HSPG2-208ENST00000471322 ISLRO14498 428 aa13.4□□□□□ -0.26
HSPG2-208ENST00000471322 CSN1S1P47710 185 aa13.4□□□□□ -0.26
HSPG2-208ENST00000471322 ERVFC1-1P60608 527 aa13.4□□□□□ -0.26
HSPG2-208ENST00000471322 RAB5BP61020 215 aa13.4□□□□□ -0.26
HSPG2-208ENST00000471322 FLI1Q01543 452 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-208ENST00000471322 C10orf99Q6UWK7 81 aa13.4□□□□□ -0.26
HSPG2-208ENST00000471322 C1QL4Q86Z23 238 aa13.4□□□□□ -0.26
HSPG2-208ENST00000471322 EXOC3-AS1Q8N2X6 119 aa13.4□□□□□ -0.26
HSPG2-208ENST00000471322 C17orf77Q96MU5 243 aa13.4□□□□□ -0.26
HSPG2-208ENST00000471322 BIN3Q9NQY0 253 aa13.4□□□□□ -0.26
HSPG2-208ENST00000471322 TRAV34A0A0B4J273 112 aa13.39□□□□□ -0.27
HSPG2-208ENST00000471322 IGLV2-8P01709 118 aa13.39□□□□□ -0.27
HSPG2-208ENST00000471322 IGHV3-11P01762 117 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms