RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 I3L2K1 104 aa9.27□□□□□ -0.93
PDZRN3-203ENST00000462146 CD5LO43866 347 aa9.27□□□□□ -0.93
PDZRN3-203ENST00000462146 PPP1R27Q86WC6 154 aa9.27□□□□□ -0.93
PDZRN3-203ENST00000462146 C8orf31Q8N9H6 132 aa9.27□□□□□ -0.93
PDZRN3-203ENST00000462146 PSG8Q9UQ74 426 aa9.27□□□□□ -0.93
PDZRN3-203ENST00000462146 TRBV19A0A075B6N1 114 aa9.27□□□□□ -0.93
PDZRN3-203ENST00000462146 SERTM2A0A1B0GWG4 89 aa9.27□□□□□ -0.93
PDZRN3-203ENST00000462146 SIGLEC15Q6ZMC9 328 aa9.27□□□□□ -0.93
PDZRN3-203ENST00000462146 FA2HQ7L5A8 372 aa9.27□□□□□ -0.93
PDZRN3-203ENST00000462146 VPS25Q9BRG1 176 aa9.27□□□□□ -0.93
PDZRN3-203ENST00000462146 NGBQ9NPG2 151 aa9.27□□□□□ -0.93
PDZRN3-203ENST00000462146 IGHV1-3A0A0C4DH29 117 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 A0A0G2JNJ9 132 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 D6R8Y8 96 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 APC2O95996 2303 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 COX7A1P24310 79 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 COTL1Q14019 142 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 TMEM14CQ9P0S9 112 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 Q9UFV3 132 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 RELNP78509 3460 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 C7orf71A4D174 169 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 LYNX1G3V0Z9 82 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 LYNX1P0DP58 116 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 FGF6P10767 208 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 RIGQ13278 110 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 BPIFA4PQ86YQ2 179 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 INSIG2Q9Y5U4 225 aa9.26□□□□□ -0.93
PDZRN3-203ENST00000462146 PPBPP02775 128 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 AMN1Q8IY45 258 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 TMEM75Q8N9X5 138 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 OR10AG1Q8NH19 301 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 SIGLEC8Q9NYZ4 499 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 GAGE12BA1L429 117 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 PSG3Q16557 428 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 KLF17Q5JT82 389 aaPredicted RBP9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 JMJD8Q96S16 334 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 SMKR1H3BMG3 65 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 C16orf97H3BN30 126 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 IGLV1-47P01700 117 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 S100A7P31151 101 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 RBPJQ06330 500 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 LYZL1Q6UWQ5 148 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 Q6ZS92 163 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 PIP4P1Q86T03 277 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 RABAC1Q9UI14 185 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 HILPDAQ9Y5L2 63 aa9.25□□□□□ -0.93
PDZRN3-203ENST00000462146 PIEZO2Q9H5I5 2752 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 H3BRN7 92 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 K7EIM0 57 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 CACNG7P62955 275 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 PLGLAQ15195 96 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 TMEM97Q5BJF2 176 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 WFDC3Q8IUB2 231 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 FAM57AQ8TBR7 257 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 RNASE6Q93091 150 aaKnown RBP9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 SHANK2-AS3Q9BTD1 123 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 BUB1B-PAK6H3BSN5 160 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 SAP30O75446 220 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 IL4P05112 153 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 FCGR2BP31994 310 aaPredicted RBP9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 CSN1S1P47710 185 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 GATD1Q8NB37 220 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 SCNM1Q9BWG6 230 aa9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 PEF1Q9UBV8 284 aaKnown RBP9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 ANKRD11Q6UB99 2663 aaPredicted RBP9.24□□□□□ -0.93
PDZRN3-203ENST00000462146 MRPS12O15235 138 aaKnown RBP9.23□□□□□ -0.93
PDZRN3-203ENST00000462146 NHLH1Q02575 133 aa9.23□□□□□ -0.93
PDZRN3-203ENST00000462146 ZNF491Q8N8L2 437 aa9.23□□□□□ -0.93
PDZRN3-203ENST00000462146 ZNF414Q96IQ9 312 aa9.23□□□□□ -0.93
PDZRN3-203ENST00000462146 DYNLRB1Q9NP97 96 aa9.23□□□□□ -0.93
PDZRN3-203ENST00000462146 GVINP1Q7Z2Y8 2422 aa9.23□□□□□ -0.93
PDZRN3-203ENST00000462146 PAX2Q02962 417 aa9.23□□□□□ -0.93
PDZRN3-203ENST00000462146 PRSS57Q6UWY2 283 aa9.23□□□□□ -0.93
PDZRN3-203ENST00000462146 TRBV6-1A0A0K0K1D8 114 aa9.22□□□□□ -0.93
PDZRN3-203ENST00000462146 CNIH1O95406 144 aa9.22□□□□□ -0.93
PDZRN3-203ENST00000462146 APOBEC3AP31941 199 aaPredicted RBP9.22□□□□□ -0.93
PDZRN3-203ENST00000462146 IGFL3Q6UXB1 125 aa9.22□□□□□ -0.93
PDZRN3-203ENST00000462146 ASCL5Q7RTU5 278 aa9.22□□□□□ -0.93
PDZRN3-203ENST00000462146 RNF125Q96EQ8 232 aa9.22□□□□□ -0.93
PDZRN3-203ENST00000462146 PRELID3AQ96N28 172 aa9.22□□□□□ -0.93
PDZRN3-203ENST00000462146 THYN1Q9P016 225 aa9.22□□□□□ -0.93
PDZRN3-203ENST00000462146 KAAG1Q9UBP8 84 aa9.22□□□□□ -0.93
PDZRN3-203ENST00000462146 ZFHX3Q15911 3703 aa9.22□□□□□ -0.93
PDZRN3-203ENST00000462146 IGKV2-40A0A087WW87 121 aaPredicted RBP9.21□□□□□ -0.93
PDZRN3-203ENST00000462146 E7EQL1 145 aa9.21□□□□□ -0.93
PDZRN3-203ENST00000462146 IGKV2D-40P01614 121 aaPredicted RBP9.21□□□□□ -0.93
PDZRN3-203ENST00000462146 RPS20P60866 119 aaKnown RBP9.21□□□□□ -0.93
PDZRN3-203ENST00000462146 MRPL51Q4U2R6 128 aaKnown RBP9.21□□□□□ -0.93
PDZRN3-203ENST00000462146 ACACAQ13085 2346 aa9.21□□□□□ -0.93
PDZRN3-203ENST00000462146 SH2D1AO60880 128 aa9.21□□□□□ -0.93
PDZRN3-203ENST00000462146 IGFL4Q6B9Z1 124 aa9.21□□□□□ -0.93
PDZRN3-203ENST00000462146 ZNF493Q6ZR52 646 aa9.21□□□□□ -0.93
PDZRN3-203ENST00000462146 PCP2Q8IVA1 136 aa9.21□□□□□ -0.93
PDZRN3-203ENST00000462146 RPEQ96AT9 228 aa9.21□□□□□ -0.93
PDZRN3-203ENST00000462146 RAB37Q96AX2 223 aa9.21□□□□□ -0.93
PDZRN3-203ENST00000462146 H3BUT2 72 aa9.21□□□□□ -0.94
PDZRN3-203ENST00000462146 GAS8-AS1O95177 125 aa9.21□□□□□ -0.94
PDZRN3-203ENST00000462146 FAM104BQ5XKR9 115 aa9.21□□□□□ -0.94
PDZRN3-203ENST00000462146 Q8TAT8 98 aa9.21□□□□□ -0.94
PDZRN3-203ENST00000462146 ZFHX2Q9C0A1 2572 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms