RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 NPCDR1Q9BY65 106 aa2.79□□□□□ -1.96
TM9SF3-202ENST00000443638 PRO2289Q9P1D8 64 aa2.79□□□□□ -1.96
TM9SF3-202ENST00000443638 GNG8Q9UK08 70 aa2.79□□□□□ -1.96
TM9SF3-202ENST00000443638 BAIAP2Q9UQB8 552 aa2.79□□□□□ -1.96
TM9SF3-202ENST00000443638 DENND4CQ5VZ89 1909 aa2.79□□□□□ -1.96
TM9SF3-202ENST00000443638 MROH2AA6NES4 1674 aa2.79□□□□□ -1.96
TM9SF3-202ENST00000443638 SHPRHQ149N8 1683 aa2.79□□□□□ -1.96
TM9SF3-202ENST00000443638 ZC3H13Q5T200 1668 aaKnown RBP2.79□□□□□ -1.96
TM9SF3-202ENST00000443638 DIP2AQ14689 1571 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 CFAP74Q9C0B2 1584 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 LYZL6O75951 148 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 SS18Q15532 418 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 NNATQ16517 81 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 LCN15Q6UWW0 184 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 IFT20Q8IY31 132 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 OR4E2Q8NGC2 313 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 OR4C6Q8NH72 309 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 TP53RKQ96S44 253 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 LINC00470Q9BZP3 86 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 LPAR5Q9H1C0 372 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 DEPDC5O75140 1603 aa2.78□□□□□ -1.96
TM9SF3-202ENST00000443638 KDM5DQ9BY66 1539 aa2.78□□□□□ -1.97
TM9SF3-202ENST00000443638 CUL9Q8IWT3 2517 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 WDR90Q96KV7 1748 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 LOC107984640A0A0U1RRK4 108 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 C9orf170A2RU37 121 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 J3QR89 54 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 CTSGP08311 255 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 KDELR1P24390 212 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 SDC2P34741 201 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 VMA21Q3ZAQ7 101 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 RNASE10Q5GAN6 216 aaKnown RBP2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 HAGHLQ6PII5 290 aaPredicted RBP2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 AP1S3Q96PC3 154 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 TCEAL2Q9H3H9 227 aaPredicted RBP2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 OR5AC2Q9NZP5 309 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 HS3ST2Q9Y278 367 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 KDM5CP41229 1560 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 UGGT1Q9NYU2 1555 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 MAST1Q9Y2H9 1570 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 SLIT2O94813 1529 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 MALRD1Q5VYJ5 2156 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 MLH3Q9UHC1 1453 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 KIDINS220Q9ULH0 1771 aa2.77□□□□□ -1.97
TM9SF3-202ENST00000443638 TNS3Q68CZ2 1445 aa2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 IBTKQ9P2D0 1353 aaPredicted RBP2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 SCN9AQ15858 1988 aa2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 TMSB15BA0A087X1C1 80 aa2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 K7ERJ3 54 aa2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 GNG7O60262 68 aa2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 NDUFA6P56556 154 aa2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 RPS25P62851 125 aaKnown RBP2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 GLYATL3Q5SZD4 288 aa2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 C3orf62Q6ZUJ4 267 aa2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 OR51A4Q8NGJ6 313 aa2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 TAF9BQ9HBM6 251 aa2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 LRRC9Q6ZRR7 1453 aa2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 DOCK4Q8N1I0 1966 aa2.76□□□□□ -1.97
TM9SF3-202ENST00000443638 KIF26AQ9ULI4 1882 aaPredicted RBP2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 ATP7AQ04656 1500 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 HIST1H2BKO60814 126 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 IGLV6-57P01721 117 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 HIST1H2BJP06899 126 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 PAEPP09466 180 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 METTL15P1P0C7V9 234 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 RPL35P42766 123 aaKnown RBP2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 MRPS10P82664 201 aaKnown RBP2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 ZNF345Q14585 488 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 EIF5AL1Q6IS14 154 aaKnown RBP2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 AAED1Q7RTV5 226 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 LINC00305Q7Z4B0 112 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 ZNF418Q8TF45 676 aaPredicted RBP2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 MRPS24Q96EL2 167 aaKnown RBP2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 C20orf166-AS1Q96NR2 134 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 PDCD10Q9BUL8 212 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 BCL2L10Q9HD36 194 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 CBLN4Q9NTU7 201 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 NHP2Q9NX24 153 aaKnown RBP2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 COA4Q9NYJ1 87 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 NALCNQ8IZF0 1738 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 GOLGA3Q08378 1498 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 NCOA2Q15596 1464 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 RALGAPBQ86X10 1494 aa2.75□□□□□ -1.97
TM9SF3-202ENST00000443638 GLI3P10071 1580 aa2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 UBR2Q8IWV8 1755 aa2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 MYH11P35749 1972 aa2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 PRDM15P57071 1507 aaPredicted RBP2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 ARHGEF28Q8N1W1 1705 aaKnown RBP2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 F6UZH7 168 aa2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 SDCBPO00560 298 aaPredicted RBP2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 S100A8P05109 93 aa2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 TRGC1P0CF51 173 aa2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 FABP2P12104 132 aa2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 RELAQ04206 551 aa2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 Q8IYB0 196 aa2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 C9orf163Q8N9P6 203 aa2.74□□□□□ -1.97
TM9SF3-202ENST00000443638 C14orf144Q96I85 54 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms