RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 SOX21Q9Y651 276 aaPredicted RBP11.49□□□□□ -0.57
GABPA-202ENST00000400075 SRCAPQ6ZRS2 3230 aa11.49□□□□□ -0.57
GABPA-202ENST00000400075 H3BRM9 83 aa11.49□□□□□ -0.57
GABPA-202ENST00000400075 SPRNQ5BIV9 151 aa11.49□□□□□ -0.57
GABPA-202ENST00000400075 C5orf52A6NGY3 159 aa11.49□□□□□ -0.57
GABPA-202ENST00000400075 HOXD3P31249 432 aaPredicted RBP11.49□□□□□ -0.57
GABPA-202ENST00000400075 SLC17A3O00476 420 aa11.48□□□□□ -0.57
GABPA-202ENST00000400075 LHBP01229 141 aa11.48□□□□□ -0.57
GABPA-202ENST00000400075 LGALS1P09382 135 aaKnown RBP11.48□□□□□ -0.57
GABPA-202ENST00000400075 FOXE3Q13461 319 aa11.48□□□□□ -0.57
GABPA-202ENST00000400075 COPS9Q8WXC6 57 aa11.48□□□□□ -0.57
GABPA-202ENST00000400075 ZNF134P52741 427 aa11.48□□□□□ -0.57
GABPA-202ENST00000400075 TCTAP57738 103 aa11.48□□□□□ -0.57
GABPA-202ENST00000400075 IGHV3-73A0A0B4J1V6 119 aa11.48□□□□□ -0.57
GABPA-202ENST00000400075 F2Z2F3 143 aa11.48□□□□□ -0.57
GABPA-202ENST00000400075 H0YIZ8 118 aa11.48□□□□□ -0.57
GABPA-202ENST00000400075 ZFP36P26651 326 aaKnown RBP11.48□□□□□ -0.57
GABPA-202ENST00000400075 ORMDL3Q8N138 153 aa11.48□□□□□ -0.57
GABPA-202ENST00000400075 OR13C6PQ8NH95 151 aa11.48□□□□□ -0.57
GABPA-202ENST00000400075 IFITM10A6NMD0 228 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 C15orf62A8K5M9 175 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 IFI27P40305 119 aaPredicted RBP11.47□□□□□ -0.57
GABPA-202ENST00000400075 SNRPEP62304 92 aaKnown RBP11.47□□□□□ -0.57
GABPA-202ENST00000400075 SCGB3A1Q96QR1 104 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 TMEM14BQ9NUH8 114 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 RNF222A6NCQ9 220 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 SPINK13Q1W4C9 94 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 TPSG1Q9NRR2 321 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 SRSF4Q08170 494 aaKnown RBP11.47□□□□□ -0.57
GABPA-202ENST00000400075 VAMP3Q15836 100 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 LYPD1Q8N2G4 141 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 C8orf31Q8N9H6 132 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 MGST2Q99735 147 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 ADARB2-AS1A8MUL3 147 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 STAG3L2P0CL84 134 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 STAG3L3P0CL85 134 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 FOLR2P14207 255 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 GP9P14770 177 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 Q8TAT8 98 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 C1orf147Q96MC9 270 aaPredicted RBP11.47□□□□□ -0.57
GABPA-202ENST00000400075 SHANK2-AS3Q9BTD1 123 aa11.47□□□□□ -0.57
GABPA-202ENST00000400075 HIGD1CA8MV81 97 aa11.46□□□□□ -0.57
GABPA-202ENST00000400075 Q6ZRM9 215 aa11.46□□□□□ -0.57
GABPA-202ENST00000400075 VCX2Q9H322 139 aa11.46□□□□□ -0.57
GABPA-202ENST00000400075 C1orf194Q5T5A4 169 aa11.46□□□□□ -0.57
GABPA-202ENST00000400075 LINC00862A6NCI5 91 aa11.46□□□□□ -0.58
GABPA-202ENST00000400075 CD5LO43866 347 aa11.46□□□□□ -0.58
GABPA-202ENST00000400075 MRAP2Q96G30 205 aa11.46□□□□□ -0.58
GABPA-202ENST00000400075 SEPSECSQ9HD40 501 aaKnown RBP11.46□□□□□ -0.58
GABPA-202ENST00000400075 TRBV9A0A0B4J1U6 114 aa11.46□□□□□ -0.58
GABPA-202ENST00000400075 TRAV8-6A0A0B4J262 113 aa11.46□□□□□ -0.58
GABPA-202ENST00000400075 LY6G6FQ5SQ64 297 aa11.46□□□□□ -0.58
GABPA-202ENST00000400075 C2CD3Q4AC94 2353 aa11.45□□□□□ -0.58
GABPA-202ENST00000400075 A0A0G2JRQ6 117 aa11.45□□□□□ -0.58
GABPA-202ENST00000400075 EREGO14944 169 aa11.45□□□□□ -0.58
GABPA-202ENST00000400075 SPATA31B1PQ5VZV4 182 aa11.45□□□□□ -0.58
GABPA-202ENST00000400075 TCRAP04437 139 aa11.45□□□□□ -0.58
GABPA-202ENST00000400075 BTCP35070 178 aa11.45□□□□□ -0.58
GABPA-202ENST00000400075 TMEM86BQ8N661 226 aa11.45□□□□□ -0.58
GABPA-202ENST00000400075 C18orf15Q96N68 181 aa11.45□□□□□ -0.58
GABPA-202ENST00000400075 IGLV3-1P01715 115 aa11.44□□□□□ -0.58
GABPA-202ENST00000400075 JKAMPQ9P055 326 aa11.44□□□□□ -0.58
GABPA-202ENST00000400075 ATP5LO75964 103 aa11.44□□□□□ -0.58
GABPA-202ENST00000400075 FOXC2Q99958 501 aa11.44□□□□□ -0.58
GABPA-202ENST00000400075 IL36BQ9NZH7 164 aa11.44□□□□□ -0.58
GABPA-202ENST00000400075 FNDC10F2Z333 226 aa11.44□□□□□ -0.58
GABPA-202ENST00000400075 PDE6HQ13956 83 aa11.44□□□□□ -0.58
GABPA-202ENST00000400075 MED12LQ86YW9 2145 aa11.44□□□□□ -0.58
GABPA-202ENST00000400075 M0R143 59 aa11.43□□□□□ -0.58
GABPA-202ENST00000400075 ZNF876PQ49A33 203 aa11.43□□□□□ -0.58
GABPA-202ENST00000400075 RAB37Q96AX2 223 aa11.43□□□□□ -0.58
GABPA-202ENST00000400075 RNASE7Q9H1E1 156 aaKnown RBP11.43□□□□□ -0.58
GABPA-202ENST00000400075 IGHV7-4-1A0A0J9YVY3 117 aa11.43□□□□□ -0.58
GABPA-202ENST00000400075 C7orf71A4D174 169 aa11.43□□□□□ -0.58
GABPA-202ENST00000400075 J3QR89 54 aa11.43□□□□□ -0.58
GABPA-202ENST00000400075 LMO4P61968 165 aa11.43□□□□□ -0.58
GABPA-202ENST00000400075 WT1-ASQ06250 92 aa11.43□□□□□ -0.58
GABPA-202ENST00000400075 CBLN1P23435 193 aa11.43□□□□□ -0.58
GABPA-202ENST00000400075 CENPFP49454 3210 aa11.43□□□□□ -0.58
GABPA-202ENST00000400075 DNAJC9-AS1A6NH13 148 aa11.43□□□□□ -0.58
GABPA-202ENST00000400075 COX6CP09669 75 aa11.43□□□□□ -0.58
GABPA-202ENST00000400075 BCL6BQ8N143 479 aaPredicted RBP11.43□□□□□ -0.58
GABPA-202ENST00000400075 DIRC3C9JPN6 131 aa11.42□□□□□ -0.58
GABPA-202ENST00000400075 MYCNOSP40205 109 aa11.42□□□□□ -0.58
GABPA-202ENST00000400075 FAM90A2PQ658T7 463 aa11.42□□□□□ -0.58
GABPA-202ENST00000400075 IGFBPL1Q8WX77 278 aa11.42□□□□□ -0.58
GABPA-202ENST00000400075 KNCNA6PVL3 124 aa11.42□□□□□ -0.58
GABPA-202ENST00000400075 PPBPP02775 128 aa11.42□□□□□ -0.58
GABPA-202ENST00000400075 IGHV4-31P0DP07 118 aa11.42□□□□□ -0.58
GABPA-202ENST00000400075 MRPS16Q9Y3D3 137 aaKnown RBP11.42□□□□□ -0.58
GABPA-202ENST00000400075 IGKV3D-20A0A0C4DH25 116 aa11.42□□□□□ -0.58
GABPA-202ENST00000400075 SRP19P09132 144 aaKnown RBP11.42□□□□□ -0.58
GABPA-202ENST00000400075 CFHR3Q02985 330 aa11.42□□□□□ -0.58
GABPA-202ENST00000400075 TTC9CQ8N5M4 171 aa11.41□□□□□ -0.58
GABPA-202ENST00000400075 PIFOQ8TCI5 191 aa11.41□□□□□ -0.58
GABPA-202ENST00000400075 HSPB9Q9BQS6 159 aa11.41□□□□□ -0.58
GABPA-202ENST00000400075 NCOA6Q14686 2063 aaPredicted RBP11.41□□□□□ -0.58
GABPA-202ENST00000400075 APOHP02749 345 aaPredicted RBP11.41□□□□□ -0.58
GABPA-202ENST00000400075 TRGC2P03986 189 aa11.41□□□□□ -0.58
GABPA-202ENST00000400075 SLURP1P55000 103 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms