RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 RAB9AP51151 201 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 LCNL1Q6ZST4 164 aa13.66□□□□□ -0.22
PTPRA-205ENST00000399903 MED13LQ71F56 2210 aa13.65□□□□□ -0.22
PTPRA-205ENST00000399903 WT1-ASQ06250 92 aa13.65□□□□□ -0.22
PTPRA-205ENST00000399903 RIGQ13278 110 aa13.65□□□□□ -0.22
PTPRA-205ENST00000399903 SVEP1Q4LDE5 3571 aa13.65□□□□□ -0.22
PTPRA-205ENST00000399903 DSCAMO60469 2012 aa13.65□□□□□ -0.22
PTPRA-205ENST00000399903 GAGE12HA6NDE8 117 aa13.65□□□□□ -0.22
PTPRA-205ENST00000399903 CEACAM3P40198 252 aa13.65□□□□□ -0.22
PTPRA-205ENST00000399903 FOXC1Q12948 553 aa13.65□□□□□ -0.22
PTPRA-205ENST00000399903 FAM216BQ8N7L0 139 aa13.65□□□□□ -0.22
PTPRA-205ENST00000399903 ZNF714Q96N38 554 aa13.65□□□□□ -0.22
PTPRA-205ENST00000399903 KBTBD11-OT1A0A1B0GTJ5 212 aa13.64□□□□□ -0.23
PTPRA-205ENST00000399903 AMN1Q8IY45 258 aa13.64□□□□□ -0.23
PTPRA-205ENST00000399903 LTAP01374 205 aa13.64□□□□□ -0.23
PTPRA-205ENST00000399903 ARPC1AQ92747 370 aa13.64□□□□□ -0.23
PTPRA-205ENST00000399903 PLSCR4Q9NRQ2 329 aa13.64□□□□□ -0.23
PTPRA-205ENST00000399903 TMEM213A2RRL7 107 aa13.64□□□□□ -0.23
PTPRA-205ENST00000399903 CKS1BP61024 79 aa13.64□□□□□ -0.23
PTPRA-205ENST00000399903 OR5AN1Q8NGI8 311 aa13.64□□□□□ -0.23
PTPRA-205ENST00000399903 SOX21Q9Y651 276 aaPredicted RBP13.64□□□□□ -0.23
PTPRA-205ENST00000399903 BOD1L2Q8IYS8 172 aa13.63□□□□□ -0.23
PTPRA-205ENST00000399903 FMC1Q96HJ9 113 aa13.63□□□□□ -0.23
PTPRA-205ENST00000399903 MLST8Q9BVC4 326 aa13.63□□□□□ -0.23
PTPRA-205ENST00000399903 PRSS22Q9GZN4 317 aa13.63□□□□□ -0.23
PTPRA-205ENST00000399903 ATP5G2Q06055 141 aa13.63□□□□□ -0.23
PTPRA-205ENST00000399903 CACNG8Q8WXS5 425 aa13.63□□□□□ -0.23
PTPRA-205ENST00000399903 PRELID3AQ96N28 172 aa13.63□□□□□ -0.23
PTPRA-205ENST00000399903 ATP6V0BQ99437 205 aa13.63□□□□□ -0.23
PTPRA-205ENST00000399903 COL25A1Q9BXS0 654 aaPredicted RBP13.63□□□□□ -0.23
PTPRA-205ENST00000399903 SIGLEC8Q9NYZ4 499 aa13.63□□□□□ -0.23
PTPRA-205ENST00000399903 H3BMG7 143 aa13.62□□□□□ -0.23
PTPRA-205ENST00000399903 SLC25A17O43808 307 aa13.62□□□□□ -0.23
PTPRA-205ENST00000399903 ASCL5Q7RTU5 278 aa13.62□□□□□ -0.23
PTPRA-205ENST00000399903 C19orf71A6NCJ1 209 aa13.62□□□□□ -0.23
PTPRA-205ENST00000399903 SRRM5B3KS81 715 aa13.62□□□□□ -0.23
PTPRA-205ENST00000399903 PRSS1P07477 247 aa13.62□□□□□ -0.23
PTPRA-205ENST00000399903 PRB3Q04118 309 aaPredicted RBP13.62□□□□□ -0.23
PTPRA-205ENST00000399903 PRR30Q53SZ7 412 aaPredicted RBP13.62□□□□□ -0.23
PTPRA-205ENST00000399903 ABHD17AQ96GS6 310 aa13.62□□□□□ -0.23
PTPRA-205ENST00000399903 PPIFP30405 207 aaKnown RBP13.62□□□□□ -0.23
PTPRA-205ENST00000399903 SUB1P53999 127 aaKnown RBP eCLIP13.62□□□□□ -0.23
PTPRA-205ENST00000399903 SFTA2Q6UW10 78 aa13.62□□□□□ -0.23
PTPRA-205ENST00000399903 PIP4P2Q8N4L2 257 aa13.62□□□□□ -0.23
PTPRA-205ENST00000399903 SLC25A15Q9Y619 301 aa13.62□□□□□ -0.23
PTPRA-205ENST00000399903 DIAPH2-AS1Q14236 149 aa13.61□□□□□ -0.23
PTPRA-205ENST00000399903 OR4X2Q8NGF9 303 aa13.61□□□□□ -0.23
PTPRA-205ENST00000399903 IFI27L1Q96BM0 104 aa13.61□□□□□ -0.23
PTPRA-205ENST00000399903 IGKV1D-37A0A075B6S9 117 aa13.61□□□□□ -0.23
PTPRA-205ENST00000399903 Q86TA4 180 aa13.61□□□□□ -0.23
PTPRA-205ENST00000399903 OR9G4Q8NGQ1 327 aa13.61□□□□□ -0.23
PTPRA-205ENST00000399903 TRAV26-1A0A087WT03 109 aa13.61□□□□□ -0.23
PTPRA-205ENST00000399903 J3QR89 54 aa13.61□□□□□ -0.23
PTPRA-205ENST00000399903 SCGB2A2Q13296 93 aa13.61□□□□□ -0.23
PTPRA-205ENST00000399903 TPSG1Q9NRR2 321 aa13.61□□□□□ -0.23
PTPRA-205ENST00000399903 C22orf46C9J442 243 aa13.6□□□□□ -0.23
PTPRA-205ENST00000399903 K7EQM0 130 aa13.6□□□□□ -0.23
PTPRA-205ENST00000399903 HAX1O00165 279 aa13.6□□□□□ -0.23
PTPRA-205ENST00000399903 ASH1LQ9NR48 2969 aaKnown RBP13.6□□□□□ -0.23
PTPRA-205ENST00000399903 CACNA1BQ00975 2339 aa13.6□□□□□ -0.23
PTPRA-205ENST00000399903 DSCAML1Q8TD84 2053 aa13.6□□□□□ -0.23
PTPRA-205ENST00000399903 GTSCR1Q86UQ5 136 aa13.6□□□□□ -0.23
PTPRA-205ENST00000399903 STXBP6Q8NFX7 210 aa13.6□□□□□ -0.23
PTPRA-205ENST00000399903 NDUFA4L2Q9NRX3 87 aa13.6□□□□□ -0.23
PTPRA-205ENST00000399903 CSMD1Q96PZ7 3565 aa13.6□□□□□ -0.23
PTPRA-205ENST00000399903 RBP4P02753 201 aa13.59□□□□□ -0.23
PTPRA-205ENST00000399903 CCL3L1P16619 93 aa13.59□□□□□ -0.23
PTPRA-205ENST00000399903 CD300EQ496F6 205 aaPredicted RBP13.59□□□□□ -0.23
PTPRA-205ENST00000399903 C17orf77Q96MU5 243 aa13.59□□□□□ -0.23
PTPRA-205ENST00000399903 AGRNO00468 2067 aa13.59□□□□□ -0.23
PTPRA-205ENST00000399903 CEACAM4O75871 244 aa13.59□□□□□ -0.23
PTPRA-205ENST00000399903 OR10X1Q8NGY0 326 aa13.59□□□□□ -0.23
PTPRA-205ENST00000399903 VGLL1Q99990 258 aa13.59□□□□□ -0.23
PTPRA-205ENST00000399903 TNFRSF1AP19438 455 aa13.59□□□□□ -0.23
PTPRA-205ENST00000399903 CKS2P33552 79 aa13.59□□□□□ -0.23
PTPRA-205ENST00000399903 Q6ZS92 163 aa13.59□□□□□ -0.23
PTPRA-205ENST00000399903 FAM222BQ8WU58 562 aa13.59□□□□□ -0.23
PTPRA-205ENST00000399903 A0A096LNJ9 63 aa13.58□□□□□ -0.24
PTPRA-205ENST00000399903 IGKV2D-26A0A0A0MRZ7 120 aa13.58□□□□□ -0.24
PTPRA-205ENST00000399903 INSL3P51460 131 aa13.58□□□□□ -0.24
PTPRA-205ENST00000399903 IGLV1-44P01699 117 aa13.58□□□□□ -0.24
PTPRA-205ENST00000399903 MYCNOSP40205 109 aa13.58□□□□□ -0.24
PTPRA-205ENST00000399903 CCDC144NLQ6NUI1 221 aa13.58□□□□□ -0.24
PTPRA-205ENST00000399903 FAM169BQ8N8A8 192 aa13.58□□□□□ -0.24
PTPRA-205ENST00000399903 RPUSD1Q9UJJ7 312 aaKnown RBP13.58□□□□□ -0.24
PTPRA-205ENST00000399903 KLF12Q9Y4X4 402 aa13.58□□□□□ -0.24
PTPRA-205ENST00000399903 MBD3L4A6NDZ8 208 aaPredicted RBP13.57□□□□□ -0.24
PTPRA-205ENST00000399903 MBD3L3A6NE82 208 aaPredicted RBP13.57□□□□□ -0.24
PTPRA-205ENST00000399903 MBD3L5A6NJ08 208 aaPredicted RBP13.57□□□□□ -0.24
PTPRA-205ENST00000399903 M0R3E3 92 aa13.57□□□□□ -0.24
PTPRA-205ENST00000399903 HBDP02042 147 aa13.57□□□□□ -0.24
PTPRA-205ENST00000399903 SMIM17P0DL12 118 aa13.57□□□□□ -0.24
PTPRA-205ENST00000399903 CT83Q5H943 113 aa13.57□□□□□ -0.24
PTPRA-205ENST00000399903 MBD3L2Q8NHZ7 208 aaPredicted RBP13.57□□□□□ -0.24
PTPRA-205ENST00000399903 DCHS2Q6V1P9 2916 aa13.57□□□□□ -0.24
PTPRA-205ENST00000399903 LYZL1Q6UWQ5 148 aa13.57□□□□□ -0.24
PTPRA-205ENST00000399903 SLC25A48Q6ZT89 311 aaKnown RBP13.57□□□□□ -0.24
PTPRA-205ENST00000399903 CHAC1Q9BUX1 264 aa13.57□□□□□ -0.24
PTPRA-205ENST00000399903 ZNF492Q9P255 531 aa13.57□□□□□ -0.24
PTPRA-205ENST00000399903 SVIPQ8NHG7 77 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms