RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 BANF2Q9H503 90 aa3.27□□□□□ -1.89
GABPB1-204ENST00000396464 MYH11P35749 1972 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 DSPPQ9NZW4 1301 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 QSER1Q2KHR3 1735 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 LAMB2P55268 1798 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 MAST2Q6P0Q8 1798 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.26□□□□□ -1.89
GABPB1-204ENST00000396464 TRBV24-1A0A075B6N3 115 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 IGKV6D-41A0A0C4DH26 115 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 C17orf51A8MQB3 221 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 K7ERJ3 54 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 M0R143 59 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 UBFD1O14562 309 aaKnown RBP3.26□□□□□ -1.89
GABPB1-204ENST00000396464 LY6HO94772 140 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 IGHV1-69P01742 117 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 TCRAP04437 139 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 AKAIN1P0CW23 69 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 HIST1H4AP62805 103 aaKnown RBP3.26□□□□□ -1.89
GABPB1-204ENST00000396464 NCMAPQ5T1S8 102 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 ZNF705AQ6ZN79 300 aaPredicted RBP3.26□□□□□ -1.89
GABPB1-204ENST00000396464 HIST3H2BBQ8N257 126 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 OR5D14Q8NGL3 314 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 NAT14Q8WUY8 206 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 DEDD2Q8WXF8 326 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 MAGOHBQ96A72 148 aaKnown RBP3.26□□□□□ -1.89
GABPB1-204ENST00000396464 YPEL2Q96QA6 119 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 OR4C12Q96R67 309 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 BOKQ9UMX3 212 aaPredicted RBP3.26□□□□□ -1.89
GABPB1-204ENST00000396464 ICOSQ9Y6W8 199 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 FER1L6Q2WGJ9 1857 aa3.26□□□□□ -1.89
GABPB1-204ENST00000396464 GTF3C1Q12789 2109 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 IGKV3D-20A0A0C4DH25 116 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 TRBV27A0A0K0K1C4 114 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 MDFIC2A0A1B0GVS7 189 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 TMEM218A2RU14 115 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 A8MWV9 139 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 NDUFB3O43676 98 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 LHBP01229 141 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 IGHV3-7P01780 117 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 CRYGSP22914 178 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 GUCA1AP43080 201 aaPredicted RBP3.25□□□□□ -1.89
GABPB1-204ENST00000396464 QRFPP83859 136 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 AKR1C1Q04828 323 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 HSD17B12Q53GQ0 312 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 MEIG1Q5JSS6 88 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 C22orf39Q6P5X5 142 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 OR5A2Q8NGI9 324 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 NPCDR1Q9BY65 106 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 C16orf95Q9H693 158 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 LHX9Q9NQ69 397 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 EPDR1Q9UM22 224 aa3.25□□□□□ -1.89
GABPB1-204ENST00000396464 LTBP1Q14766 1721 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 COL24A1Q17RW2 1714 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 TRAV27A0A087WT01 109 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 A0A0B4J2C4 111 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 IFITM5A6NNB3 132 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 A8MUU9 505 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 C19orf84I3L1E1 186 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 SNAPC5O75971 98 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 GNG4P50150 75 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 SMIM5Q71RC9 77 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 MIR17HGQ75NE6 70 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 SAXO1Q8IYX7 474 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 SPANXA2-OT1Q8N9U9 137 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 CLDND2Q8NHS1 167 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 HIST1H2BLQ99880 126 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 TMEM191AQ9H0A3 160 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 MYH7P12883 1935 aa3.24□□□□□ -1.89
GABPB1-204ENST00000396464 ZNF609O15014 1411 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 NUP210LQ5VU65 1888 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 IGKV1OR2-108A0A075B7D4 117 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 TRAV30A0A087WSZ9 112 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 A0A096LNJ9 63 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 BBIP1A8MTZ0 92 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 A8MWP6 167 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 HIST1H2BKO60814 126 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 IGLV1-47P01700 117 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 SLC25A5P05141 298 aaKnown RBP3.23□□□□□ -1.89
GABPB1-204ENST00000396464 HIST1H2BJP06899 126 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 ZNF880Q6PDB4 577 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 SDIM1Q6ZPB5 146 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 Q6ZR03 302 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 RPS19BP1Q86WX3 136 aaKnown RBP3.23□□□□□ -1.89
GABPB1-204ENST00000396464 C3orf56Q8N813 242 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 WFDC11Q8NEX6 87 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 MYH7BA7E2Y1 1941 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 MYH13Q9UKX3 1938 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 TNRC6CQ9HCJ0 1690 aaKnown RBP3.23□□□□□ -1.89
GABPB1-204ENST00000396464 SIPA1L1O43166 1804 aa3.23□□□□□ -1.89
GABPB1-204ENST00000396464 EML6Q6ZMW3 1958 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 TRBV6-6A0A0A6YYG2 114 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 IGHV3-73A0A0B4J1V6 119 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 PINLYPA6NC86 204 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 OR2T8A6NH00 312 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 PLGLB1Q02325 96 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 DEFB116Q30KQ4 102 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
GABPB1-204ENST00000396464 Q5W150 140 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms