RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 RNASE2P10153 161 aaKnown RBP4.26□□□□□ -1.73
VPS41-203ENST00000395969 ATP5G2Q06055 141 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 PAX8Q06710 450 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 TIGITQ495A1 244 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 BOD1L2Q8IYS8 172 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 OR5A1Q8NGJ0 315 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 BLNKQ8WV28 456 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 FAM168AQ92567 244 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 GEMIN7Q9H840 131 aaKnown RBP4.26□□□□□ -1.73
VPS41-203ENST00000395969 ZFHX4Q86UP3 3567 aa4.26□□□□□ -1.73
VPS41-203ENST00000395969 TEX50A0A1B0GTY4 177 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 A8MZ25 164 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.25□□□□□ -1.73
VPS41-203ENST00000395969 PLXNB1O43157 2135 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 LINC00173Q6ZV60 143 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 ATP5L2Q7Z4Y8 100 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 NUP35Q8NFH5 326 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 H1FXQ92522 213 aaKnown RBP4.25□□□□□ -1.73
VPS41-203ENST00000395969 FZR1Q9UM11 496 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 NCOR1O75376 2440 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 IGHV3OR15-7A0A075B7D8 119 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 A0A1B0GW15 77 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 FGF6P10767 208 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 SSBP2P81877 361 aaPredicted RBP4.25□□□□□ -1.73
VPS41-203ENST00000395969 TMEM97Q5BJF2 176 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 LINC01545Q5VT33 79 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 LYPD2Q6UXB3 125 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 COX8CQ7Z4L0 72 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 DPF1Q92782 380 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 ZNF503Q96F45 646 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 TIMD4Q96H15 378 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 GRAMD2BQ96HH9 432 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 TRGV9Q99603 122 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 TMEM167BQ9NRX6 74 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 GNG12Q9UBI6 72 aa4.25□□□□□ -1.73
VPS41-203ENST00000395969 A0A087WWL8 130 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 GGTLC3B5MD39 225 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 ENSAO43768 121 aaKnown RBP4.24□□□□□ -1.73
VPS41-203ENST00000395969 FSHBP01225 129 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 OR5AL1P0C617 328 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 HTR1DP28221 377 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 FOXA3P55318 350 aaPredicted RBP4.24□□□□□ -1.73
VPS41-203ENST00000395969 LMO4P61968 165 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 DUX4L9Q6RFH8 374 aaPredicted RBP4.24□□□□□ -1.73
VPS41-203ENST00000395969 C11orf44Q8N8P7 122 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 OR2K2Q8NGT1 345 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 ZNF479Q96JC4 524 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 SSBP4Q9BWG4 385 aaPredicted RBP4.24□□□□□ -1.73
VPS41-203ENST00000395969 SSBP3Q9BWW4 388 aaPredicted RBP4.24□□□□□ -1.73
VPS41-203ENST00000395969 MGAQ8IWI9 3026 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 SRRM4A7MD48 611 aaKnown RBP4.24□□□□□ -1.73
VPS41-203ENST00000395969 LEPROTL1O95214 131 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 HOXB4P17483 251 aaPredicted RBP4.24□□□□□ -1.73
VPS41-203ENST00000395969 UBE2E1P51965 193 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 MFAP2P55001 183 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 RPL39P5Q59GN2 51 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 CCDC144NLQ6NUI1 221 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 ZCCHC24Q8N2G6 241 aaKnown RBP4.24□□□□□ -1.73
VPS41-203ENST00000395969 SMIM20Q8N5G0 67 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 FANCD2OSQ96PS1 177 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 TMEM14CQ9P0S9 112 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 CACNA1HO95180 2353 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 IGHV1-3A0A0C4DH29 117 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 A6NDN8 102 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 TEX22C9J3V5 150 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 LCE2BO14633 110 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 PLAUP00749 431 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 PRB4P10163 310 aaPredicted RBP4.24□□□□□ -1.73
VPS41-203ENST00000395969 MYCNOSP40205 109 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 MIR17HGQ75NE6 70 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 BPIFA4PQ86YQ2 179 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 TTC9CQ8N5M4 171 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 OR10AG1Q8NH19 301 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 OR4A16Q8NH70 328 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 SSMEM1Q8WWF3 244 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 FLYWCH2Q96CP2 140 aaKnown RBP4.24□□□□□ -1.73
VPS41-203ENST00000395969 C7orf69Q9H7B7 122 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 DYNLRB1Q9NP97 96 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 F11RQ9Y624 299 aaKnown RBP4.24□□□□□ -1.73
VPS41-203ENST00000395969 SPCS1Q9Y6A9 102 aa4.24□□□□□ -1.73
VPS41-203ENST00000395969 A0A0G2JLM5 398 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 A0A1W2PPM0 123 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 A0A1W2PPR1 153 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 A0A1W2PRE2 83 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 B5MCH6 92 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 H3BUA1 57 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 J3QLI3 93 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 CSN3P07498 182 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 SAA1P0DJI8 122 aaPredicted RBP4.23□□□□□ -1.73
VPS41-203ENST00000395969 HIST1H1EP10412 219 aaKnown RBP4.23□□□□□ -1.73
VPS41-203ENST00000395969 PPIFP30405 207 aaKnown RBP4.23□□□□□ -1.73
VPS41-203ENST00000395969 ZNF138P52744 262 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 CCL8P80075 99 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 HSD52Q0P140 79 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 PSG5Q15238 335 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 LTC4SQ16873 150 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 TCTEX1D4Q5JR98 221 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 UTF1Q5T230 341 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 TEPPQ6URK8 271 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 FOXI2Q6ZQN5 318 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms