RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ZNF586Q9NXT0 402 aa10.94□□□□□ -0.66
SNCA-205ENST00000394991 IGKV1OR2-108A0A075B7D4 117 aa10.93□□□□□ -0.66
SNCA-205ENST00000394991 TRAV8-2A0A0B4J237 113 aa10.93□□□□□ -0.66
SNCA-205ENST00000394991 A0A1W2PPQ1 181 aa10.93□□□□□ -0.66
SNCA-205ENST00000394991 SNRPGP15A8MWD9 76 aa10.93□□□□□ -0.66
SNCA-205ENST00000394991 DUSP14O95147 198 aaKnown RBP10.93□□□□□ -0.66
SNCA-205ENST00000394991 TCRBP04435 133 aa10.93□□□□□ -0.66
SNCA-205ENST00000394991 ATP5IP56385 69 aaPredicted RBP10.93□□□□□ -0.66
SNCA-205ENST00000394991 RAB11AP62491 216 aa10.93□□□□□ -0.66
SNCA-205ENST00000394991 Q6ZRN7 208 aaPredicted RBP10.93□□□□□ -0.66
SNCA-205ENST00000394991 RNF182Q8N6D2 247 aa10.93□□□□□ -0.66
SNCA-205ENST00000394991 CIB3Q96Q77 187 aaPredicted RBP10.93□□□□□ -0.66
SNCA-205ENST00000394991 SLC25A39Q9BZJ4 359 aaPredicted RBP10.93□□□□□ -0.66
SNCA-205ENST00000394991 TRAV26-1A0A087WT03 109 aa10.92□□□□□ -0.66
SNCA-205ENST00000394991 BOLA2-SMG1P6H3BVE0 249 aa10.92□□□□□ -0.66
SNCA-205ENST00000394991 GPX4P36969 197 aaPredicted RBP10.92□□□□□ -0.66
SNCA-205ENST00000394991 GALR1P47211 349 aa10.92□□□□□ -0.66
SNCA-205ENST00000394991 LINC00315P59091 139 aa10.92□□□□□ -0.66
SNCA-205ENST00000394991 RPP30P78346 268 aaKnown RBP10.92□□□□□ -0.66
SNCA-205ENST00000394991 ESRGQ1W209 222 aa10.92□□□□□ -0.66
SNCA-205ENST00000394991 TRGV9Q99603 122 aa10.92□□□□□ -0.66
SNCA-205ENST00000394991 SLC25A22Q9H936 323 aa10.92□□□□□ -0.66
SNCA-205ENST00000394991 PTTG2Q9NZH5 202 aa10.92□□□□□ -0.66
SNCA-205ENST00000394991 ZNF98A6NK75 572 aa10.91□□□□□ -0.66
SNCA-205ENST00000394991 FABP1P07148 127 aa10.91□□□□□ -0.66
SNCA-205ENST00000394991 ZNF846Q147U1 533 aa10.91□□□□□ -0.66
SNCA-205ENST00000394991 SPANXN5Q5MJ07 72 aa10.91□□□□□ -0.66
SNCA-205ENST00000394991 MZT2BQ6NZ67 158 aa10.91□□□□□ -0.66
SNCA-205ENST00000394991 RXFP4Q8TDU9 374 aa10.91□□□□□ -0.66
SNCA-205ENST00000394991 GNPNAT1Q96EK6 184 aaPredicted RBP10.91□□□□□ -0.66
SNCA-205ENST00000394991 LINC01587Q99440 93 aa10.91□□□□□ -0.66
SNCA-205ENST00000394991 NOP10Q9NPE3 64 aaKnown RBP10.91□□□□□ -0.66
SNCA-205ENST00000394991 NUDT15Q9NV35 164 aa10.91□□□□□ -0.66
SNCA-205ENST00000394991 MRPS16Q9Y3D3 137 aaKnown RBP10.91□□□□□ -0.66
SNCA-205ENST00000394991 SRRM2Q9UQ35 2752 aaKnown RBP10.91□□□□□ -0.66
SNCA-205ENST00000394991 A0A0J9YY99 117 aa10.9□□□□□ -0.66
SNCA-205ENST00000394991 FAM240BA0A1B0GVZ2 78 aa10.9□□□□□ -0.66
SNCA-205ENST00000394991 H3BP45 60 aa10.9□□□□□ -0.66
SNCA-205ENST00000394991 SCGB1D2O95969 90 aa10.9□□□□□ -0.66
SNCA-205ENST00000394991 TAS2R60P59551 318 aa10.9□□□□□ -0.66
SNCA-205ENST00000394991 POLR2GP62487 172 aaKnown RBP eCLIP10.9□□□□□ -0.66
SNCA-205ENST00000394991 OR5I1Q13606 314 aa10.9□□□□□ -0.66
SNCA-205ENST00000394991 IAH1Q2TAA2 248 aaPredicted RBP10.9□□□□□ -0.66
SNCA-205ENST00000394991 THAP8Q8NA92 274 aa10.9□□□□□ -0.66
SNCA-205ENST00000394991 RNASE8Q8TDE3 154 aaKnown RBP10.9□□□□□ -0.66
SNCA-205ENST00000394991 MITD1Q8WV92 249 aa10.9□□□□□ -0.66
SNCA-205ENST00000394991 ZNF503Q96F45 646 aa10.9□□□□□ -0.66
SNCA-205ENST00000394991 C16orf74Q96GX8 76 aa10.9□□□□□ -0.66
SNCA-205ENST00000394991 GSKIPQ9P0R6 139 aa10.9□□□□□ -0.66
SNCA-205ENST00000394991 TIMM8BQ9Y5J9 83 aaPredicted RBP10.9□□□□□ -0.66
SNCA-205ENST00000394991 SSSCA1O60232 199 aa10.89□□□□□ -0.67
SNCA-205ENST00000394991 H2AFB2P0C5Z0 115 aa10.89□□□□□ -0.67
SNCA-205ENST00000394991 HTN1P15515 57 aa10.89□□□□□ -0.67
SNCA-205ENST00000394991 HOXA5P20719 270 aa10.89□□□□□ -0.67
SNCA-205ENST00000394991 ID3Q02535 119 aa10.89□□□□□ -0.67
SNCA-205ENST00000394991 TMEM256Q8N2U0 113 aa10.89□□□□□ -0.67
SNCA-205ENST00000394991 LINC00612Q8N6U2 182 aa10.89□□□□□ -0.67
SNCA-205ENST00000394991 FRZBQ92765 325 aa10.89□□□□□ -0.67
SNCA-205ENST00000394991 SEC22CQ9BRL7 303 aa10.89□□□□□ -0.67
SNCA-205ENST00000394991 BATF3Q9NR55 127 aa10.89□□□□□ -0.67
SNCA-205ENST00000394991 PSENENQ9NZ42 101 aa10.89□□□□□ -0.67
SNCA-205ENST00000394991 STRAPQ9Y3F4 350 aaKnown RBP10.89□□□□□ -0.67
SNCA-205ENST00000394991 FAM25EA8MYX2 175 aa10.88□□□□□ -0.67
SNCA-205ENST00000394991 CCSO14618 274 aa10.88□□□□□ -0.67
SNCA-205ENST00000394991 PRB4P10163 310 aaPredicted RBP10.88□□□□□ -0.67
SNCA-205ENST00000394991 M6PRP20645 277 aa10.88□□□□□ -0.67
SNCA-205ENST00000394991 ASAH1Q13510 395 aa10.88□□□□□ -0.67
SNCA-205ENST00000394991 TMEM144Q7Z5S9 345 aa10.88□□□□□ -0.67
SNCA-205ENST00000394991 ZBTB8BQ8NAP8 495 aaPredicted RBP10.88□□□□□ -0.67
SNCA-205ENST00000394991 ZNF738Q8NE65 137 aa10.88□□□□□ -0.67
SNCA-205ENST00000394991 OR4D5Q8NGN0 318 aa10.88□□□□□ -0.67
SNCA-205ENST00000394991 OR1B1Q8NGR6 318 aa10.88□□□□□ -0.67
SNCA-205ENST00000394991 PGPEP1Q9NXJ5 209 aa10.88□□□□□ -0.67
SNCA-205ENST00000394991 SLC45A2Q9UMX9 530 aa10.88□□□□□ -0.67
SNCA-205ENST00000394991 UPK1BO75841 260 aa10.87□□□□□ -0.67
SNCA-205ENST00000394991 GATA2P23769 480 aaPredicted RBP10.87□□□□□ -0.67
SNCA-205ENST00000394991 KRTAP10-1P60331 282 aa10.87□□□□□ -0.67
SNCA-205ENST00000394991 HIST1H1AQ02539 215 aaPredicted RBP10.87□□□□□ -0.67
SNCA-205ENST00000394991 TMEM182Q6ZP80 229 aaPredicted RBP10.87□□□□□ -0.67
SNCA-205ENST00000394991 OR10J6PQ8NGY7 276 aa10.87□□□□□ -0.67
SNCA-205ENST00000394991 ENKURQ8TC29 256 aa10.87□□□□□ -0.67
SNCA-205ENST00000394991 ZNF431Q8TF32 576 aaPredicted RBP10.87□□□□□ -0.67
SNCA-205ENST00000394991 TMEM263Q8WUH6 116 aaKnown RBP10.87□□□□□ -0.67
SNCA-205ENST00000394991 RHOBP62745 196 aa10.86□□□□□ -0.67
SNCA-205ENST00000394991 FGL1Q08830 312 aa10.86□□□□□ -0.67
SNCA-205ENST00000394991 ZNF493Q6ZR52 646 aa10.86□□□□□ -0.67
SNCA-205ENST00000394991 C12orf45Q8N5I9 185 aaPredicted RBP10.86□□□□□ -0.67
SNCA-205ENST00000394991 OR8A1Q8NGG7 326 aa10.86□□□□□ -0.67
SNCA-205ENST00000394991 C18orf15Q96N68 181 aa10.86□□□□□ -0.67
SNCA-205ENST00000394991 MDFICQ9P1T7 246 aa10.86□□□□□ -0.67
SNCA-205ENST00000394991 SMCO3A2RU48 225 aa10.85□□□□□ -0.67
SNCA-205ENST00000394991 C5orf51A6NDU8 294 aa10.85□□□□□ -0.67
SNCA-205ENST00000394991 CFDP00746 253 aaPredicted RBP10.85□□□□□ -0.67
SNCA-205ENST00000394991 ORM2P19652 201 aa10.85□□□□□ -0.67
SNCA-205ENST00000394991 AKR1C1Q04828 323 aa10.85□□□□□ -0.67
SNCA-205ENST00000394991 CDPF1Q6NVV7 123 aa10.85□□□□□ -0.67
SNCA-205ENST00000394991 SMIM8Q96KF7 97 aa10.85□□□□□ -0.67
SNCA-205ENST00000394991 GPR82Q96P67 336 aa10.85□□□□□ -0.67
SNCA-205ENST00000394991 PRSS46E5RG02 174 aa10.84□□□□□ -0.67
SNCA-205ENST00000394991 H3BNG1 76 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms