RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 TIMM8BQ9Y5J9 83 aaPredicted RBP4.33□□□□□ -1.72
SMARCAD1-203ENST00000394961 CCL18P55774 89 aa4.33□□□□□ -1.72
SMARCAD1-203ENST00000394961 C9orf170A2RU37 121 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 FABP12A6NFH5 140 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 KLLNB2CW77 178 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 PATE2Q6UY27 113 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 WRBO00258 174 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 SLC25A5P05141 298 aaKnown RBP4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 FAAP20Q6NZ36 180 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 RNF141Q8WVD5 230 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 RSG1Q9BU20 258 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 RBM38Q9H0Z9 239 aaKnown RBP4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 HOXB5P09067 269 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 SLAQ13239 276 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 PPP1R1AQ13522 171 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 TEPPQ6URK8 271 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 TMEM182Q6ZP80 229 aaPredicted RBP4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 TOMM5Q8N4H5 51 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 ZBTB8BQ8NAP8 495 aaPredicted RBP4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 MITD1Q8WV92 249 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 PTH2Q96A98 100 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 SRRQ9GZT4 340 aa4.32□□□□□ -1.72
SMARCAD1-203ENST00000394961 PKHD1P08F94 4074 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 PCLOQ9Y6V0 5065 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 RBAKDNA6NC62 111 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 CIDEAO60543 219 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 LINC00869P0C866 280 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 RAP2BP61225 183 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 C11orf72Q8NBR9 251 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 LINC00052Q96N35 136 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 PGPEP1Q9NXJ5 209 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 LENEPQ9Y5L5 61 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 APOBP04114 4563 aaKnown RBP4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 SPINK4O60575 86 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 MPDU1O75352 247 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 C1QBP02746 253 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 M6PRP20645 277 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 RPL29P47914 159 aaKnown RBP4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 IL15RAQ13261 267 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 ATP6V1FQ16864 119 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 C9orf47Q6ZRZ4 202 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 C12orf45Q8N5I9 185 aaPredicted RBP4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 OR1L4Q8NGR5 311 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 TMED6Q8WW62 240 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 PFDN5Q99471 154 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 SCRT1Q9BWW7 348 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 NFE4Q86UQ8 179 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 BPIFA4PQ86YQ2 179 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 MCFD2Q8NI22 146 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 PBDC1Q9BVG4 233 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 PSENENQ9NZ42 101 aa4.31□□□□□ -1.72
SMARCAD1-203ENST00000394961 OR4E1P0C645 316 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 TNP2Q05952 138 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 OR2F1Q13607 317 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 OPCMLQ14982 345 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 OR4B1Q8NGF8 309 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 LINC00477Q96M19 166 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 VGLL1Q99990 258 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 WDR83OSQ9Y284 106 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 KIAA1109Q2LD37 5005 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 RGS5O15539 181 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 BTCP35070 178 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 ZNF738Q8NE65 137 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 MGAT4CQ9UBM8 478 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 RCL1Q9Y2P8 373 aaKnown RBP4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 F6UB75 175 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 ZNF324O75467 553 aaPredicted RBP4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 TCL1AP56279 114 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 ZNF415Q09FC8 603 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 LYPD1Q8N2G4 141 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 OR10P1Q8NGE3 313 aa4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 RPUSD4Q96CM3 377 aaKnown RBP4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 PARD6GQ9BYG4 376 aaPredicted RBP4.3□□□□□ -1.72
SMARCAD1-203ENST00000394961 ZNF705GA8MUZ8 300 aaPredicted RBP4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 NOL3O60936 208 aaKnown RBP4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 AZU1P20160 251 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 AKR1C1Q04828 323 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 SPINK13Q1W4C9 94 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 ZNF575Q86XF7 245 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 PPP1R14BQ96C90 147 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 ARV1Q9H2C2 271 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 TRAV26-1A0A087WT03 109 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 IAPPP10997 89 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 ZNF767PQ75MW2 155 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 NTN5Q8WTR8 489 aaPredicted RBP4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 MGST2Q99735 147 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 Q9H8V8 135 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 C16orf90A8MZG2 172 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 ASAH1Q13510 395 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 GFI1BQ5VTD9 330 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 SH2D6Q7Z4S9 175 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 CCDC28AQ8IWP9 274 aa4.29□□□□□ -1.72
SMARCAD1-203ENST00000394961 AGPAT2O15120 278 aa4.28□□□□□ -1.72
SMARCAD1-203ENST00000394961 CT45A10P0DMU9 189 aa4.28□□□□□ -1.72
SMARCAD1-203ENST00000394961 FXYD7P58549 80 aa4.28□□□□□ -1.72
SMARCAD1-203ENST00000394961 EIF4E3Q8N5X7 224 aaKnown RBP4.28□□□□□ -1.72
SMARCAD1-203ENST00000394961 SDHCQ99643 169 aaPredicted RBP4.28□□□□□ -1.72
SMARCAD1-203ENST00000394961 ATG101Q9BSB4 218 aa4.28□□□□□ -1.72
SMARCAD1-203ENST00000394961 MRPL32Q9BYC8 188 aaKnown RBP4.28□□□□□ -1.72
SMARCAD1-203ENST00000394961 PKHD1L1Q86WI1 4243 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms