RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SCNM1Q9BWG6 230 aa13.21□□□□□ -0.29
PCDHA1-201ENST00000378133 APC2O95996 2303 aa13.21□□□□□ -0.3
PCDHA1-201ENST00000378133 NCR2O95944 276 aa13.2□□□□□ -0.3
PCDHA1-201ENST00000378133 UFSP1Q6NVU6 142 aa13.2□□□□□ -0.3
PCDHA1-201ENST00000378133 CIARTQ8N365 385 aaPredicted RBP13.2□□□□□ -0.3
PCDHA1-201ENST00000378133 C8orf31Q8N9H6 132 aa13.2□□□□□ -0.3
PCDHA1-201ENST00000378133 TMEM155Q4W5P6 130 aa13.2□□□□□ -0.3
PCDHA1-201ENST00000378133 TRAV8-1A0A0A6YYK1 113 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 NPIPB6E9PJ23 425 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 CRYGCP07315 174 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 FAM87AP0C7U9 286 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 CSN1S1P47710 185 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 SCGB2A2Q13296 93 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 TMEM95Q3KNT9 176 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 PRSS3P2Q8NHM4 247 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 TACC2O95359 2948 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 C9orf118A6NHY6 69 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 FA2HQ7L5A8 372 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 DYNLRB1Q9NP97 96 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 SMPXQ9UHP9 88 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 ZZEF1O43149 2961 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 A6NDN8 102 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 H3BRM9 83 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 H3BUT2 72 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 OR10AG1Q8NH19 301 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 RABAC1Q9UI14 185 aa13.19□□□□□ -0.3
PCDHA1-201ENST00000378133 A0A1B0GUT8 65 aa13.18□□□□□ -0.3
PCDHA1-201ENST00000378133 RPL27AP46776 148 aaKnown RBP13.18□□□□□ -0.3
PCDHA1-201ENST00000378133 TMEM133Q9H2Q1 129 aa13.18□□□□□ -0.3
PCDHA1-201ENST00000378133 GP9P14770 177 aa13.18□□□□□ -0.3
PCDHA1-201ENST00000378133 PRNTQ86SH4 94 aa13.18□□□□□ -0.3
PCDHA1-201ENST00000378133 TRGV9Q99603 122 aa13.18□□□□□ -0.3
PCDHA1-201ENST00000378133 NAA38Q9BRA0 125 aaKnown RBP13.18□□□□□ -0.3
PCDHA1-201ENST00000378133 FGF6P10767 208 aa13.17□□□□□ -0.3
PCDHA1-201ENST00000378133 Q86TA4 180 aa13.17□□□□□ -0.3
PCDHA1-201ENST00000378133 ABHD17AQ96GS6 310 aa13.17□□□□□ -0.3
PCDHA1-201ENST00000378133 JMJD8Q96S16 334 aa13.17□□□□□ -0.3
PCDHA1-201ENST00000378133 VSTM5A8MXK1 200 aa13.17□□□□□ -0.3
PCDHA1-201ENST00000378133 ARMS2P0C7Q2 107 aa13.17□□□□□ -0.3
PCDHA1-201ENST00000378133 TMEM116Q8NCL8 245 aa13.17□□□□□ -0.3
PCDHA1-201ENST00000378133 OR8A1Q8NGG7 326 aa13.17□□□□□ -0.3
PCDHA1-201ENST00000378133 KAAG1Q9UBP8 84 aa13.17□□□□□ -0.3
PCDHA1-201ENST00000378133 PPIAL4CA0A0B4J2A2 164 aa13.16□□□□□ -0.3
PCDHA1-201ENST00000378133 E7EQL1 145 aa13.16□□□□□ -0.3
PCDHA1-201ENST00000378133 RIGQ13278 110 aa13.16□□□□□ -0.3
PCDHA1-201ENST00000378133 SRSF12Q8WXF0 261 aaKnown RBP13.16□□□□□ -0.3
PCDHA1-201ENST00000378133 SIGLEC9Q9Y336 463 aa13.16□□□□□ -0.3
PCDHA1-201ENST00000378133 HILPDAQ9Y5L2 63 aa13.16□□□□□ -0.3
PCDHA1-201ENST00000378133 A0A1B0GV72 72 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 K7EP34 96 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 TCTAP57738 103 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 PVRIGQ6DKI7 326 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 GFRALQ6UXV0 394 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 GOLT1AQ6ZVE7 132 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 Q71RC1 249 aaPredicted RBP13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 DPF1Q92782 380 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 INSIG2Q9Y5U4 225 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 A0A0G2JLM5 398 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 SHISA9B4DS77 424 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 FAM106CPP0CH98 169 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 KIR3DS1Q14943 382 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 FAM106AQ4KMX7 169 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 OR2K2Q8NGT1 345 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 C8orf46Q8TAG6 207 aa13.15□□□□□ -0.3
PCDHA1-201ENST00000378133 LYNX1G3V0Z9 82 aa13.14□□□□□ -0.31
PCDHA1-201ENST00000378133 OVOL3O00110 214 aa13.14□□□□□ -0.31
PCDHA1-201ENST00000378133 CRYGBP07316 175 aa13.14□□□□□ -0.31
PCDHA1-201ENST00000378133 LYNX1P0DP58 116 aa13.14□□□□□ -0.31
PCDHA1-201ENST00000378133 JKAMPQ9P055 326 aa13.14□□□□□ -0.31
PCDHA1-201ENST00000378133 AZU1P20160 251 aa13.14□□□□□ -0.31
PCDHA1-201ENST00000378133 CEACAM3P40198 252 aa13.14□□□□□ -0.31
PCDHA1-201ENST00000378133 IFI27P40305 119 aaPredicted RBP13.14□□□□□ -0.31
PCDHA1-201ENST00000378133 SMAGPQ0VAQ4 97 aa13.14□□□□□ -0.31
PCDHA1-201ENST00000378133 EXOC3-AS1Q8N2X6 119 aa13.14□□□□□ -0.31
PCDHA1-201ENST00000378133 RAB37Q96AX2 223 aa13.14□□□□□ -0.31
PCDHA1-201ENST00000378133 OTORQ9NRC9 128 aa13.14□□□□□ -0.31
PCDHA1-201ENST00000378133 TRAV26-1A0A087WT03 109 aa13.13□□□□□ -0.31
PCDHA1-201ENST00000378133 IGLV2-11P01706 119 aa13.13□□□□□ -0.31
PCDHA1-201ENST00000378133 PPP1R27Q86WC6 154 aa13.13□□□□□ -0.31
PCDHA1-201ENST00000378133 BOD1L2Q8IYS8 172 aa13.13□□□□□ -0.31
PCDHA1-201ENST00000378133 TPPP3Q9BW30 176 aa13.13□□□□□ -0.31
PCDHA1-201ENST00000378133 GTSF1LQ9H1H1 148 aa13.13□□□□□ -0.31
PCDHA1-201ENST00000378133 THYN1Q9P016 225 aa13.13□□□□□ -0.31
PCDHA1-201ENST00000378133 IGHV1-3A0A0C4DH29 117 aa13.13□□□□□ -0.31
PCDHA1-201ENST00000378133 LOC389332A0A1B0GUA5 103 aa13.13□□□□□ -0.31
PCDHA1-201ENST00000378133 A1L4Q6 167 aa13.13□□□□□ -0.31
PCDHA1-201ENST00000378133 CRYBA4P53673 196 aa13.13□□□□□ -0.31
PCDHA1-201ENST00000378133 LYZP61626 148 aa13.13□□□□□ -0.31
PCDHA1-201ENST00000378133 FBXL15Q9H469 300 aa13.13□□□□□ -0.31
PCDHA1-201ENST00000378133 IGLV1-47P01700 117 aa13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 HSD52Q0P140 79 aa13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 PIP4P2Q8N4L2 257 aa13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 ATP6V0BQ99437 205 aa13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 F11RQ9Y624 299 aaKnown RBP13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 SERTM2A0A1B0GWG4 89 aa13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 LOXL1Q08397 574 aaPredicted RBP13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 Q8NA96 180 aa13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 RALYQ9UKM9 306 aaKnown RBP13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 HIGD1AQ9Y241 93 aa13.12□□□□□ -0.31
PCDHA1-201ENST00000378133 TEX22C9J3V5 150 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms