RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 C12orf54Q6X4T0 127 aa13.4□□□□□ -0.26
PHF1-202ENST00000374516 PERPQ96FX8 193 aa13.4□□□□□ -0.26
PHF1-202ENST00000374516 MUC21A0A0G2JKD1 596 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 MUC21A0A140T8X8 626 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 TMEM8BA6NDV4 472 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 LTAP01374 205 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 OR5AL1P0C617 328 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 ZFP36P26651 326 aaKnown RBP13.39□□□□□ -0.27
PHF1-202ENST00000374516 RPS20P60866 119 aaKnown RBP13.39□□□□□ -0.27
PHF1-202ENST00000374516 MUC21Q5SSG8 566 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 RBPMS2Q6ZRY4 209 aaKnown RBP13.39□□□□□ -0.27
PHF1-202ENST00000374516 OR1B1Q8NGR6 318 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 GFRA4Q9GZZ7 299 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 SCRT2Q9NQ03 307 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 ZNF492Q9P255 531 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 OR2T8A6NH00 312 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 LY6LH3BQJ8 138 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 HCP5Q6MZN7 132 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 DAZAP1Q96EP5 407 aaKnown RBP13.39□□□□□ -0.27
PHF1-202ENST00000374516 FMC1Q96HJ9 113 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 MAP1LC3CQ9BXW4 147 aa13.39□□□□□ -0.27
PHF1-202ENST00000374516 ABCA1O95477 2261 aa13.38□□□□□ -0.27
PHF1-202ENST00000374516 SPG11Q96JI7 2443 aa13.38□□□□□ -0.27
PHF1-202ENST00000374516 LOC102724200A0A096LPH7 203 aaPredicted RBP13.38□□□□□ -0.27
PHF1-202ENST00000374516 HTR1DP28221 377 aa13.38□□□□□ -0.27
PHF1-202ENST00000374516 ZNF138P52744 262 aa13.38□□□□□ -0.27
PHF1-202ENST00000374516 PET117Q6UWS5 81 aa13.38□□□□□ -0.27
PHF1-202ENST00000374516 MCRIP2Q9BUT9 160 aaKnown RBP13.38□□□□□ -0.27
PHF1-202ENST00000374516 FBXL15Q9H469 300 aa13.38□□□□□ -0.27
PHF1-202ENST00000374516 GSX1Q9H4S2 264 aaPredicted RBP13.38□□□□□ -0.27
PHF1-202ENST00000374516 SIGLEC9Q9Y336 463 aa13.38□□□□□ -0.27
PHF1-202ENST00000374516 TIMM23O14925 209 aa13.38□□□□□ -0.27
PHF1-202ENST00000374516 RUSC1-AS1Q66K80 236 aa13.38□□□□□ -0.27
PHF1-202ENST00000374516 TEX45Q8NA69 505 aa13.38□□□□□ -0.27
PHF1-202ENST00000374516 C5orf17Q8NAS9 161 aa13.38□□□□□ -0.27
PHF1-202ENST00000374516 CST9LQ9H4G1 147 aa13.38□□□□□ -0.27
PHF1-202ENST00000374516 CHEK1O14757 476 aa13.37□□□□□ -0.27
PHF1-202ENST00000374516 PPBPP02775 128 aa13.37□□□□□ -0.27
PHF1-202ENST00000374516 PSG1P11464 419 aa13.37□□□□□ -0.27
PHF1-202ENST00000374516 AMMECR1LQ6DCA0 310 aa13.37□□□□□ -0.27
PHF1-202ENST00000374516 RNF24Q9Y225 148 aa13.37□□□□□ -0.27
PHF1-202ENST00000374516 FAM231BA6NCW3 169 aa13.36□□□□□ -0.27
PHF1-202ENST00000374516 CBY3A6NI87 242 aa13.36□□□□□ -0.27
PHF1-202ENST00000374516 TCRAP04437 139 aa13.36□□□□□ -0.27
PHF1-202ENST00000374516 CRYGBP07316 175 aa13.36□□□□□ -0.27
PHF1-202ENST00000374516 PPP1R27Q86WC6 154 aa13.36□□□□□ -0.27
PHF1-202ENST00000374516 MS4A6AQ9H2W1 248 aa13.36□□□□□ -0.27
PHF1-202ENST00000374516 HLA-DRB1P01911 266 aa13.36□□□□□ -0.27
PHF1-202ENST00000374516 EFNA4P52798 201 aa13.36□□□□□ -0.27
PHF1-202ENST00000374516 OR11H6Q8NGC7 330 aa13.36□□□□□ -0.27
PHF1-202ENST00000374516 DPM3Q9P2X0 92 aa13.36□□□□□ -0.27
PHF1-202ENST00000374516 DOPEY1Q5JWR5 2465 aa13.36□□□□□ -0.27
PHF1-202ENST00000374516 CD5LO43866 347 aa13.35□□□□□ -0.27
PHF1-202ENST00000374516 PRTN3P24158 256 aa13.35□□□□□ -0.27
PHF1-202ENST00000374516 RPL27AP46776 148 aaKnown RBP13.35□□□□□ -0.27
PHF1-202ENST00000374516 OCIAD2Q56VL3 154 aa13.35□□□□□ -0.27
PHF1-202ENST00000374516 Q9H3A6 140 aa13.35□□□□□ -0.27
PHF1-202ENST00000374516 HSPB8Q9UJY1 196 aa13.35□□□□□ -0.27
PHF1-202ENST00000374516 CELSR1Q9NYQ6 3014 aa13.35□□□□□ -0.27
PHF1-202ENST00000374516 NPIPB6E9PJ23 425 aa13.35□□□□□ -0.27
PHF1-202ENST00000374516 H0Y8G0 127 aa13.35□□□□□ -0.27
PHF1-202ENST00000374516 H3BTX0 84 aa13.35□□□□□ -0.27
PHF1-202ENST00000374516 PLGLAQ15195 96 aa13.35□□□□□ -0.27
PHF1-202ENST00000374516 TMUB1Q9BVT8 246 aa13.35□□□□□ -0.27
PHF1-202ENST00000374516 CELSR2Q9HCU4 2923 aa13.34□□□□□ -0.27
PHF1-202ENST00000374516 A0A087X0K7 114 aa13.34□□□□□ -0.27
PHF1-202ENST00000374516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.34□□□□□ -0.27
PHF1-202ENST00000374516 M0R1W7 72 aa13.34□□□□□ -0.27
PHF1-202ENST00000374516 HAX1O00165 279 aa13.34□□□□□ -0.27
PHF1-202ENST00000374516 CRYGCP07315 174 aa13.34□□□□□ -0.27
PHF1-202ENST00000374516 VMO1Q7Z5L0 202 aa13.34□□□□□ -0.27
PHF1-202ENST00000374516 IGHV3-21A0A0B4J1V1 117 aa13.34□□□□□ -0.27
PHF1-202ENST00000374516 TOX4O94842 621 aa13.34□□□□□ -0.27
PHF1-202ENST00000374516 APOHP02749 345 aaPredicted RBP13.34□□□□□ -0.27
PHF1-202ENST00000374516 GP9P14770 177 aa13.34□□□□□ -0.27
PHF1-202ENST00000374516 COL8A1P27658 744 aa13.34□□□□□ -0.27
PHF1-202ENST00000374516 HIST1H1AQ02539 215 aaPredicted RBP13.34□□□□□ -0.27
PHF1-202ENST00000374516 ETFRF1Q6IPR1 90 aa13.34□□□□□ -0.27
PHF1-202ENST00000374516 TRGV9Q99603 122 aa13.34□□□□□ -0.27
PHF1-202ENST00000374516 BPESC1Q9GZL8 116 aa13.34□□□□□ -0.27
PHF1-202ENST00000374516 ZNF462Q96JM2 2506 aa13.33□□□□□ -0.28
PHF1-202ENST00000374516 ZFHX3Q15911 3703 aa13.33□□□□□ -0.28
PHF1-202ENST00000374516 PSG9Q00887 426 aa13.33□□□□□ -0.28
PHF1-202ENST00000374516 LINC01545Q5VT33 79 aa13.33□□□□□ -0.28
PHF1-202ENST00000374516 PMCHL2Q9BQD1 86 aa13.33□□□□□ -0.28
PHF1-202ENST00000374516 CIARTQ8N365 385 aaPredicted RBP13.33□□□□□ -0.28
PHF1-202ENST00000374516 VPS25Q9BRG1 176 aa13.33□□□□□ -0.28
PHF1-202ENST00000374516 CSMD2Q7Z408 3487 aa13.32□□□□□ -0.28
PHF1-202ENST00000374516 TRAV8-1A0A0A6YYK1 113 aa13.32□□□□□ -0.28
PHF1-202ENST00000374516 PRB1P04280 392 aa13.32□□□□□ -0.28
PHF1-202ENST00000374516 CSN3P07498 182 aa13.32□□□□□ -0.28
PHF1-202ENST00000374516 GPR183P32249 361 aa13.32□□□□□ -0.28
PHF1-202ENST00000374516 HES1Q14469 280 aa13.32□□□□□ -0.28
PHF1-202ENST00000374516 ODF3BA8MYP8 253 aa13.31□□□□□ -0.28
PHF1-202ENST00000374516 OVOL3O00110 214 aa13.31□□□□□ -0.28
PHF1-202ENST00000374516 DYNAPQ8N1N2 210 aa13.31□□□□□ -0.28
PHF1-202ENST00000374516 CFHR4Q92496 578 aa13.31□□□□□ -0.28
PHF1-202ENST00000374516 TIMM8BQ9Y5J9 83 aaPredicted RBP13.31□□□□□ -0.28
PHF1-202ENST00000374516 CENPEQ02224 2701 aa13.31□□□□□ -0.28
PHF1-202ENST00000374516 EPG5Q9HCE0 2579 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms