RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 C5orf17Q8NAS9 161 aa11.69□□□□□ -0.54
PRKN-204ENST00000366896 BLNKQ8WV28 456 aa11.69□□□□□ -0.54
PRKN-204ENST00000366896 FMC1Q96HJ9 113 aa11.69□□□□□ -0.54
PRKN-204ENST00000366896 IGHV3-21A0A0B4J1V1 117 aa11.68□□□□□ -0.54
PRKN-204ENST00000366896 FAM231BA6NCW3 169 aa11.68□□□□□ -0.54
PRKN-204ENST00000366896 E7EQL1 145 aa11.68□□□□□ -0.54
PRKN-204ENST00000366896 P01737 135 aa11.68□□□□□ -0.54
PRKN-204ENST00000366896 IGHV1-8P0DP01 117 aa11.68□□□□□ -0.54
PRKN-204ENST00000366896 LINC01545Q5VT33 79 aa11.68□□□□□ -0.54
PRKN-204ENST00000366896 RBPMS2Q6ZRY4 209 aaKnown RBP11.68□□□□□ -0.54
PRKN-204ENST00000366896 HSPB8Q9UJY1 196 aa11.68□□□□□ -0.54
PRKN-204ENST00000366896 RPH3ALQ9UNE2 315 aa11.68□□□□□ -0.54
PRKN-204ENST00000366896 PGPA6NDG6 321 aa11.68□□□□□ -0.54
PRKN-204ENST00000366896 ENSAO43768 121 aaKnown RBP11.68□□□□□ -0.54
PRKN-204ENST00000366896 NBEAP1P0C6P0 100 aa11.68□□□□□ -0.54
PRKN-204ENST00000366896 COX8AP10176 69 aa11.68□□□□□ -0.54
PRKN-204ENST00000366896 C2orf91Q6ZV80 131 aa11.68□□□□□ -0.54
PRKN-204ENST00000366896 OR1B1Q8NGR6 318 aa11.68□□□□□ -0.54
PRKN-204ENST00000366896 MCRIP2Q9BUT9 160 aaKnown RBP11.68□□□□□ -0.54
PRKN-204ENST00000366896 LTAP01374 205 aa11.67□□□□□ -0.54
PRKN-204ENST00000366896 GP9P14770 177 aa11.67□□□□□ -0.54
PRKN-204ENST00000366896 PKDREJQ9NTG1 2253 aa11.67□□□□□ -0.54
PRKN-204ENST00000366896 H3BTX0 84 aa11.67□□□□□ -0.54
PRKN-204ENST00000366896 CNTFRP26992 372 aa11.67□□□□□ -0.54
PRKN-204ENST00000366896 RPL27AP46776 148 aaKnown RBP11.67□□□□□ -0.54
PRKN-204ENST00000366896 C8orf46Q8TAG6 207 aa11.67□□□□□ -0.54
PRKN-204ENST00000366896 PMCHL2Q9BQD1 86 aa11.67□□□□□ -0.54
PRKN-204ENST00000366896 TMEM133Q9H2Q1 129 aa11.67□□□□□ -0.54
PRKN-204ENST00000366896 C7orf71A4D174 169 aa11.66□□□□□ -0.54
PRKN-204ENST00000366896 CHEK1O14757 476 aa11.66□□□□□ -0.54
PRKN-204ENST00000366896 ZNF138P52744 262 aa11.66□□□□□ -0.54
PRKN-204ENST00000366896 ARF6P62330 175 aa11.66□□□□□ -0.54
PRKN-204ENST00000366896 SEC11AP67812 179 aa11.66□□□□□ -0.54
PRKN-204ENST00000366896 ZNF672Q499Z4 452 aaPredicted RBP11.66□□□□□ -0.54
PRKN-204ENST00000366896 TMEM14CQ9P0S9 112 aa11.66□□□□□ -0.54
PRKN-204ENST00000366896 TRBV6-1A0A0K0K1D8 114 aa11.65□□□□□ -0.54
PRKN-204ENST00000366896 NPIPB6E9PJ23 425 aa11.65□□□□□ -0.54
PRKN-204ENST00000366896 FOXE3Q13461 319 aa11.65□□□□□ -0.54
PRKN-204ENST00000366896 NEU4Q8WWR8 484 aaPredicted RBP11.65□□□□□ -0.54
PRKN-204ENST00000366896 TMUB1Q9BVT8 246 aa11.65□□□□□ -0.54
PRKN-204ENST00000366896 H0Y8G0 127 aa11.65□□□□□ -0.54
PRKN-204ENST00000366896 HAX1O00165 279 aa11.65□□□□□ -0.54
PRKN-204ENST00000366896 IGLV1-47P01700 117 aa11.65□□□□□ -0.54
PRKN-204ENST00000366896 APOHP02749 345 aaPredicted RBP11.65□□□□□ -0.54
PRKN-204ENST00000366896 TCRAP04437 139 aa11.65□□□□□ -0.54
PRKN-204ENST00000366896 BPIFA4PQ86YQ2 179 aa11.65□□□□□ -0.54
PRKN-204ENST00000366896 SPOCK3Q9BQ16 436 aa11.65□□□□□ -0.54
PRKN-204ENST00000366896 SRSF8Q9BRL6 282 aaKnown RBP11.65□□□□□ -0.54
PRKN-204ENST00000366896 MEGF9Q9H1U4 602 aa11.65□□□□□ -0.54
PRKN-204ENST00000366896 SIGLEC9Q9Y336 463 aa11.65□□□□□ -0.54
PRKN-204ENST00000366896 ABCA4P78363 2273 aa11.65□□□□□ -0.55
PRKN-204ENST00000366896 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.64□□□□□ -0.55
PRKN-204ENST00000366896 APOBEC3AP31941 199 aaPredicted RBP11.64□□□□□ -0.55
PRKN-204ENST00000366896 UFSP1Q6NVU6 142 aa11.64□□□□□ -0.55
PRKN-204ENST00000366896 DAZAP1Q96EP5 407 aaKnown RBP11.64□□□□□ -0.55
PRKN-204ENST00000366896 RNF5Q99942 180 aa11.64□□□□□ -0.55
PRKN-204ENST00000366896 F11RQ9Y624 299 aaKnown RBP11.64□□□□□ -0.55
PRKN-204ENST00000366896 GAGE10A6NGK3 116 aa11.64□□□□□ -0.55
PRKN-204ENST00000366896 RBP4P02753 201 aa11.64□□□□□ -0.55
PRKN-204ENST00000366896 HTR1DP28221 377 aa11.64□□□□□ -0.55
PRKN-204ENST00000366896 TMEM97Q5BJF2 176 aa11.64□□□□□ -0.55
PRKN-204ENST00000366896 OTORQ9NRC9 128 aa11.64□□□□□ -0.55
PRKN-204ENST00000366896 A0A1W2PPR1 153 aa11.63□□□□□ -0.55
PRKN-204ENST00000366896 HOXB4P17483 251 aaPredicted RBP11.63□□□□□ -0.55
PRKN-204ENST00000366896 ZNF747Q9BV97 191 aa11.63□□□□□ -0.55
PRKN-204ENST00000366896 OVOL3O00110 214 aa11.63□□□□□ -0.55
PRKN-204ENST00000366896 SAP30O75446 220 aa11.63□□□□□ -0.55
PRKN-204ENST00000366896 ZC2HC1AQ96GY0 325 aa11.63□□□□□ -0.55
PRKN-204ENST00000366896 Q9H3A6 140 aa11.63□□□□□ -0.55
PRKN-204ENST00000366896 DYNLRB1Q9NP97 96 aa11.63□□□□□ -0.55
PRKN-204ENST00000366896 A1L4Q6 167 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 S100A7P31151 101 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 C16orf54Q6UWD8 224 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 Q71RC1 249 aaPredicted RBP11.62□□□□□ -0.55
PRKN-204ENST00000366896 FER1L6-AS1Q8NA97 138 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 HIGD1AQ9Y241 93 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 SPTAN1Q13813 2472 aaKnown RBP11.62□□□□□ -0.55
PRKN-204ENST00000366896 LRRK2Q5S007 2527 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 TEX22C9J3V5 150 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 TMEM238C9JI98 176 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 CSN3P07498 182 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 FGF6P10767 208 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 PPP1R27Q86WC6 154 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 DPF1Q92782 380 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 AP5S1Q9NUS5 200 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 COL12A1Q99715 3063 aa11.62□□□□□ -0.55
PRKN-204ENST00000366896 B9A039 149 aa11.61□□□□□ -0.55
PRKN-204ENST00000366896 GOSR1O95249 250 aa11.61□□□□□ -0.55
PRKN-204ENST00000366896 COL8A1P27658 744 aa11.61□□□□□ -0.55
PRKN-204ENST00000366896 GTF2H5Q6ZYL4 71 aa11.61□□□□□ -0.55
PRKN-204ENST00000366896 IGHV1-3A0A0C4DH29 117 aa11.61□□□□□ -0.55
PRKN-204ENST00000366896 C9orf118A6NHY6 69 aa11.61□□□□□ -0.55
PRKN-204ENST00000366896 SNAI2O43623 268 aa11.61□□□□□ -0.55
PRKN-204ENST00000366896 Q86TA4 180 aa11.61□□□□□ -0.55
PRKN-204ENST00000366896 H3BRM9 83 aa11.6□□□□□ -0.55
PRKN-204ENST00000366896 BUB1B-PAK6H3BSN5 160 aa11.6□□□□□ -0.55
PRKN-204ENST00000366896 NCR2O95944 276 aa11.6□□□□□ -0.55
PRKN-204ENST00000366896 TIMM8BQ9Y5J9 83 aaPredicted RBP11.6□□□□□ -0.55
PRKN-204ENST00000366896 INSIG2Q9Y5U4 225 aa11.6□□□□□ -0.55
PRKN-204ENST00000366896 LYNX1G3V0Z9 82 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms